EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000015504 (Gene tree)
Gene ID: 101986825
Gene Symbol: Ddx42
Alias: 1810047H21Rik|B430002H05Rik|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 41230 bases
Position: chrJH996478.1:2777805-2819034
Accession: 101986825
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000016664	ResIII	PF04851.15	5.6e-07	1	1
ENSMOCP00000016664	DEAD	PF00270.29	9.7e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000020447	-	3900	XM_013354562	ENSMOCP00000016664	923 (aa)	XP_013210016	UPI00038C2CD5

Gene Model

Click here to download ENSMOCG00000015504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000015504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000015504	Ddx42	57	42.364	ENSMOCG00000012141	Ddx46	50	44.625
ENSMOCG00000015504	Ddx42	59	38.146	ENSMOCG00000012124	Ddx5	78	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000015504	Ddx42	100	93.930	ENSG00000198231	DDX42	100	98.077	Homo_sapiens
ENSMOCG00000015504	Ddx42	92	75.349	ENSAPOG00000017675	ddx42	99	72.717	Acanthochromis_polyacanthus
ENSMOCG00000015504	Ddx42	100	93.803	ENSAMEG00000003200	DDX42	100	94.017	Ailuropoda_melanoleuca
ENSMOCG00000015504	Ddx42	84	71.556	ENSACIG00000007376	ddx42	99	72.646	Amphilophus_citrinellus
ENSMOCG00000015504	Ddx42	99	71.368	ENSAOCG00000003520	ddx42	99	72.063	Amphiprion_ocellaris
ENSMOCG00000015504	Ddx42	99	71.398	ENSAPEG00000000984	ddx42	99	72.264	Amphiprion_percula
ENSMOCG00000015504	Ddx42	99	71.564	ENSATEG00000022920	ddx42	99	72.863	Anabas_testudineus
ENSMOCG00000015504	Ddx42	100	83.439	ENSAPLG00000010544	DDX42	100	84.599	Anas_platyrhynchos
ENSMOCG00000015504	Ddx42	100	83.936	ENSACAG00000003994	DDX42	99	84.255	Anolis_carolinensis
ENSMOCG00000015504	Ddx42	100	94.624	ENSANAG00000035693	DDX42	99	96.591	Aotus_nancymaae
ENSMOCG00000015504	Ddx42	90	77.061	ENSACLG00000025113	ddx42	99	73.312	Astatotilapia_calliptera
ENSMOCG00000015504	Ddx42	79	81.063	ENSAMXG00000011435	ddx42	99	70.347	Astyanax_mexicanus
ENSMOCG00000015504	Ddx42	100	92.949	ENSBTAG00000021058	DDX42	98	95.565	Bos_taurus
ENSMOCG00000015504	Ddx42	64	52.830	WBGene00008119	C46F11.4	78	53.052	Caenorhabditis_elegans
ENSMOCG00000015504	Ddx42	100	94.516	ENSCJAG00000019649	DDX42	99	97.792	Callithrix_jacchus
ENSMOCG00000015504	Ddx42	100	93.690	ENSCAFG00000012818	DDX42	100	93.797	Canis_familiaris
ENSMOCG00000015504	Ddx42	100	93.797	ENSCAFG00020026631	DDX42	100	93.904	Canis_lupus_dingo
ENSMOCG00000015504	Ddx42	100	93.504	ENSCHIG00000014431	DDX42	100	93.504	Capra_hircus
ENSMOCG00000015504	Ddx42	100	92.842	ENSTSYG00000001380	DDX42	100	92.949	Carlito_syrichta
ENSMOCG00000015504	Ddx42	73	75.185	ENSCAPG00000013621	DDX42	94	75.185	Cavia_aperea
ENSMOCG00000015504	Ddx42	100	94.415	ENSCPOG00000005633	DDX42	100	94.415	Cavia_porcellus
ENSMOCG00000015504	Ddx42	100	89.140	ENSCCAG00000020612	DDX42	97	96.557	Cebus_capucinus
ENSMOCG00000015504	Ddx42	100	94.516	ENSCATG00000030490	DDX42	100	94.516	Cercocebus_atys
ENSMOCG00000015504	Ddx42	100	95.166	ENSCLAG00000003497	DDX42	100	95.166	Chinchilla_lanigera
ENSMOCG00000015504	Ddx42	100	89.725	ENSCSAG00000003914	DDX42	100	89.936	Chlorocebus_sabaeus
ENSMOCG00000015504	Ddx42	78	94.643	ENSCHOG00000006241	DDX42	79	94.643	Choloepus_hoffmanni
ENSMOCG00000015504	Ddx42	100	83.787	ENSCPBG00000026682	DDX42	100	84.414	Chrysemys_picta_bellii
ENSMOCG00000015504	Ddx42	100	94.409	ENSCANG00000034663	DDX42	99	96.691	Colobus_angolensis_palliatus
ENSMOCG00000015504	Ddx42	100	97.309	ENSCGRG00001009775	Ddx42	100	97.309	Cricetulus_griseus_chok1gshd
ENSMOCG00000015504	Ddx42	100	97.309	ENSCGRG00000011718	Ddx42	100	97.309	Cricetulus_griseus_crigri
ENSMOCG00000015504	Ddx42	99	70.366	ENSCSEG00000021574	ddx42	99	70.569	Cynoglossus_semilaevis
ENSMOCG00000015504	Ddx42	99	69.979	ENSCVAG00000011404	ddx42	99	71.966	Cyprinodon_variegatus
ENSMOCG00000015504	Ddx42	99	69.303	ENSDARG00000037928	ddx42	99	71.005	Danio_rerio
ENSMOCG00000015504	Ddx42	100	87.953	ENSDNOG00000007961	DDX42	100	88.060	Dasypus_novemcinctus
ENSMOCG00000015504	Ddx42	100	86.403	ENSDORG00000004199	Ddx42	100	86.081	Dipodomys_ordii
ENSMOCG00000015504	Ddx42	66	60.514	FBgn0036104	CG6418	84	57.485	Drosophila_melanogaster
ENSMOCG00000015504	Ddx42	85	70.477	ENSEBUG00000001155	ddx42	96	70.352	Eptatretus_burgeri
ENSMOCG00000015504	Ddx42	100	94.439	ENSEASG00005013089	DDX42	99	96.714	Equus_asinus_asinus
ENSMOCG00000015504	Ddx42	100	94.439	ENSECAG00000022684	DDX42	100	94.545	Equus_caballus
ENSMOCG00000015504	Ddx42	67	97.297	ENSEEUG00000009144	DDX42	85	97.297	Erinaceus_europaeus
ENSMOCG00000015504	Ddx42	99	70.021	ENSELUG00000020593	ddx42	99	70.127	Esox_lucius
ENSMOCG00000015504	Ddx42	100	94.118	ENSFCAG00000003499	DDX42	100	94.225	Felis_catus
ENSMOCG00000015504	Ddx42	96	84.978	ENSFALG00000004675	DDX42	78	84.978	Ficedula_albicollis
ENSMOCG00000015504	Ddx42	100	94.742	ENSFDAG00000020516	DDX42	100	94.742	Fukomys_damarensis
ENSMOCG00000015504	Ddx42	99	70.172	ENSFHEG00000023290	ddx42	99	71.490	Fundulus_heteroclitus
ENSMOCG00000015504	Ddx42	76	77.997	ENSGMOG00000004595	ddx42	88	77.997	Gadus_morhua
ENSMOCG00000015504	Ddx42	100	82.536	ENSGALG00000000581	DDX42	100	82.848	Gallus_gallus
ENSMOCG00000015504	Ddx42	90	74.703	ENSGAFG00000011846	ddx42	96	73.333	Gambusia_affinis
ENSMOCG00000015504	Ddx42	99	68.201	ENSGACG00000009782	ddx42	99	68.206	Gasterosteus_aculeatus
ENSMOCG00000015504	Ddx42	100	84.067	ENSGAGG00000024411	DDX42	99	84.067	Gopherus_agassizii
ENSMOCG00000015504	Ddx42	100	94.624	ENSGGOG00000006779	DDX42	100	94.624	Gorilla_gorilla
ENSMOCG00000015504	Ddx42	90	77.300	ENSHBUG00000008705	ddx42	99	73.526	Haplochromis_burtoni
ENSMOCG00000015504	Ddx42	100	90.215	ENSHGLG00000010024	DDX42	100	90.215	Heterocephalus_glaber_female
ENSMOCG00000015504	Ddx42	100	93.904	ENSHGLG00100004479	-	100	94.011	Heterocephalus_glaber_male
ENSMOCG00000015504	Ddx42	93	71.757	ENSHGLG00100007138	-	95	71.757	Heterocephalus_glaber_male
ENSMOCG00000015504	Ddx42	85	78.372	ENSHCOG00000003357	ddx42	99	70.410	Hippocampus_comes
ENSMOCG00000015504	Ddx42	81	79.657	ENSIPUG00000013327	ddx42	100	69.681	Ictalurus_punctatus
ENSMOCG00000015504	Ddx42	100	95.708	ENSSTOG00000008922	DDX42	100	95.708	Ictidomys_tridecemlineatus
ENSMOCG00000015504	Ddx42	100	94.522	ENSJJAG00000011727	Ddx42	100	94.522	Jaculus_jaculus
ENSMOCG00000015504	Ddx42	99	69.150	ENSKMAG00000009914	ddx42	99	72.591	Kryptolebias_marmoratus
ENSMOCG00000015504	Ddx42	81	76.882	ENSLBEG00000004687	ddx42	99	67.556	Labrus_bergylta
ENSMOCG00000015504	Ddx42	99	76.732	ENSLACG00000013476	DDX42	97	77.802	Latimeria_chalumnae
ENSMOCG00000015504	Ddx42	99	74.730	ENSLOCG00000011764	ddx42	99	75.162	Lepisosteus_oculatus
ENSMOCG00000015504	Ddx42	100	94.086	ENSLAFG00000003249	DDX42	100	94.086	Loxodonta_africana
ENSMOCG00000015504	Ddx42	100	94.409	ENSMFAG00000031356	DDX42	100	94.409	Macaca_fascicularis
ENSMOCG00000015504	Ddx42	100	94.218	ENSMMUG00000016762	DDX42	100	94.218	Macaca_mulatta
ENSMOCG00000015504	Ddx42	100	94.409	ENSMNEG00000038250	DDX42	100	94.409	Macaca_nemestrina
ENSMOCG00000015504	Ddx42	100	93.504	ENSMLEG00000043080	DDX42	100	93.717	Mandrillus_leucophaeus
ENSMOCG00000015504	Ddx42	92	76.202	ENSMAMG00000021888	ddx42	98	72.622	Mastacembelus_armatus
ENSMOCG00000015504	Ddx42	90	77.061	ENSMZEG00005023103	ddx42	99	73.312	Maylandia_zebra
ENSMOCG00000015504	Ddx42	100	83.056	ENSMGAG00000001822	DDX42	100	83.160	Meleagris_gallopavo
ENSMOCG00000015504	Ddx42	76	98.722	ENSMAUG00000020774	-	94	98.722	Mesocricetus_auratus
ENSMOCG00000015504	Ddx42	100	94.409	ENSMICG00000009952	DDX42	100	94.409	Microcebus_murinus
ENSMOCG00000015504	Ddx42	90	72.335	ENSMMOG00000016963	ddx42	87	70.528	Mola_mola
ENSMOCG00000015504	Ddx42	51	97.645	ENSMODG00000009917	-	98	97.645	Monodelphis_domestica
ENSMOCG00000015504	Ddx42	99	72.484	ENSMALG00000007800	ddx42	99	73.412	Monopterus_albus
ENSMOCG00000015504	Ddx42	100	96.771	MGP_CAROLIEiJ_G0017314	Ddx42	100	96.771	Mus_caroli
ENSMOCG00000015504	Ddx42	100	96.555	ENSMUSG00000020705	Ddx42	100	96.555	Mus_musculus
ENSMOCG00000015504	Ddx42	78	99.851	MGP_PahariEiJ_G0018444	-	100	99.851	Mus_pahari
ENSMOCG00000015504	Ddx42	100	96.663	MGP_SPRETEiJ_G0018158	Ddx42	100	96.663	Mus_spretus
ENSMOCG00000015504	Ddx42	100	93.518	ENSMPUG00000014921	DDX42	100	93.624	Mustela_putorius_furo
ENSMOCG00000015504	Ddx42	100	91.483	ENSMLUG00000011645	DDX42	100	92.202	Myotis_lucifugus
ENSMOCG00000015504	Ddx42	100	95.918	ENSNGAG00000021897	Ddx42	100	95.918	Nannospalax_galili
ENSMOCG00000015504	Ddx42	90	75.627	ENSNBRG00000004466	ddx42	99	72.026	Neolamprologus_brichardi
ENSMOCG00000015504	Ddx42	100	94.409	ENSNLEG00000004248	DDX42	99	96.695	Nomascus_leucogenys
ENSMOCG00000015504	Ddx42	74	82.444	ENSMEUG00000013227	-	84	82.444	Notamacropus_eugenii
ENSMOCG00000015504	Ddx42	100	93.070	ENSOPRG00000014960	DDX42	100	93.177	Ochotona_princeps
ENSMOCG00000015504	Ddx42	100	91.515	ENSODEG00000007810	DDX42	100	91.515	Octodon_degus
ENSMOCG00000015504	Ddx42	90	77.180	ENSONIG00000000734	ddx42	99	73.312	Oreochromis_niloticus
ENSMOCG00000015504	Ddx42	58	92.208	ENSOANG00000000265	DDX42	100	92.208	Ornithorhynchus_anatinus
ENSMOCG00000015504	Ddx42	95	94.263	ENSOCUG00000004304	DDX42	88	94.151	Oryctolagus_cuniculus
ENSMOCG00000015504	Ddx42	100	70.594	ENSORLG00000002395	ddx42	100	70.936	Oryzias_latipes
ENSMOCG00000015504	Ddx42	100	70.923	ENSORLG00020011621	ddx42	100	72.425	Oryzias_latipes_hni
ENSMOCG00000015504	Ddx42	100	70.414	ENSORLG00015004487	ddx42	100	72.425	Oryzias_latipes_hsok
ENSMOCG00000015504	Ddx42	91	75.118	ENSOMEG00000020093	ddx42	100	71.353	Oryzias_melastigma
ENSMOCG00000015504	Ddx42	100	93.497	ENSOGAG00000006872	DDX42	100	93.603	Otolemur_garnettii
ENSMOCG00000015504	Ddx42	100	92.405	ENSOARG00000013540	DDX42	100	92.932	Ovis_aries
ENSMOCG00000015504	Ddx42	100	94.624	ENSPPAG00000007496	DDX42	100	94.624	Pan_paniscus
ENSMOCG00000015504	Ddx42	100	94.225	ENSPPRG00000002740	DDX42	100	94.332	Panthera_pardus
ENSMOCG00000015504	Ddx42	100	94.118	ENSPTIG00000009932	DDX42	100	94.225	Panthera_tigris_altaica
ENSMOCG00000015504	Ddx42	100	94.624	ENSPTRG00000009523	DDX42	100	94.624	Pan_troglodytes
ENSMOCG00000015504	Ddx42	100	94.301	ENSPANG00000020990	DDX42	100	94.301	Papio_anubis
ENSMOCG00000015504	Ddx42	100	70.905	ENSPKIG00000002901	ddx42	99	71.305	Paramormyrops_kingsleyae
ENSMOCG00000015504	Ddx42	87	91.553	ENSPSIG00000010289	DDX42	98	91.379	Pelodiscus_sinensis
ENSMOCG00000015504	Ddx42	93	71.062	ENSPMGG00000009323	ddx42	100	67.789	Periophthalmus_magnuspinnatus
ENSMOCG00000015504	Ddx42	100	97.527	ENSPEMG00000006755	Ddx42	100	97.527	Peromyscus_maniculatus_bairdii
ENSMOCG00000015504	Ddx42	81	72.477	ENSPMAG00000005580	ddx42	100	73.132	Petromyzon_marinus
ENSMOCG00000015504	Ddx42	100	89.936	ENSPCIG00000009093	DDX42	100	90.148	Phascolarctos_cinereus
ENSMOCG00000015504	Ddx42	99	70.135	ENSPFOG00000014104	ddx42	99	71.623	Poecilia_formosa
ENSMOCG00000015504	Ddx42	99	70.135	ENSPLAG00000010522	ddx42	99	71.623	Poecilia_latipinna
ENSMOCG00000015504	Ddx42	99	70.062	ENSPMEG00000010744	ddx42	99	71.548	Poecilia_mexicana
ENSMOCG00000015504	Ddx42	99	69.175	ENSPREG00000009926	ddx42	99	71.025	Poecilia_reticulata
ENSMOCG00000015504	Ddx42	100	91.516	ENSPPYG00000008531	DDX42	100	91.729	Pongo_abelii
ENSMOCG00000015504	Ddx42	92	87.921	ENSPCAG00000002474	DDX42	100	88.037	Procavia_capensis
ENSMOCG00000015504	Ddx42	100	84.064	ENSPCOG00000001559	DDX42	98	88.218	Propithecus_coquereli
ENSMOCG00000015504	Ddx42	100	90.171	ENSPVAG00000000160	DDX42	100	90.278	Pteropus_vampyrus
ENSMOCG00000015504	Ddx42	75	75.072	ENSPNYG00000013954	ddx42	97	70.886	Pundamilia_nyererei
ENSMOCG00000015504	Ddx42	78	81.011	ENSPNAG00000017352	ddx42	99	69.381	Pygocentrus_nattereri
ENSMOCG00000015504	Ddx42	100	96.663	ENSRNOG00000009474	Ddx42	100	96.663	Rattus_norvegicus
ENSMOCG00000015504	Ddx42	100	94.301	ENSRBIG00000004781	DDX42	99	96.691	Rhinopithecus_bieti
ENSMOCG00000015504	Ddx42	100	94.409	ENSRROG00000029794	DDX42	100	94.409	Rhinopithecus_roxellana
ENSMOCG00000015504	Ddx42	100	94.839	ENSSBOG00000029624	DDX42	100	94.839	Saimiri_boliviensis_boliviensis
ENSMOCG00000015504	Ddx42	100	89.831	ENSSHAG00000012896	-	100	90.042	Sarcophilus_harrisii
ENSMOCG00000015504	Ddx42	71	59.226	ENSSHAG00000007919	-	99	59.226	Sarcophilus_harrisii
ENSMOCG00000015504	Ddx42	84	80.077	ENSSFOG00015014064	ddx42	81	81.770	Scleropages_formosus
ENSMOCG00000015504	Ddx42	99	71.413	ENSSMAG00000009077	ddx42	99	72.680	Scophthalmus_maximus
ENSMOCG00000015504	Ddx42	99	71.672	ENSSDUG00000022221	ddx42	99	72.660	Seriola_dumerili
ENSMOCG00000015504	Ddx42	99	71.321	ENSSLDG00000018483	ddx42	99	71.996	Seriola_lalandi_dorsalis
ENSMOCG00000015504	Ddx42	100	93.155	ENSSARG00000009847	DDX42	100	93.262	Sorex_araneus
ENSMOCG00000015504	Ddx42	100	84.900	ENSSPUG00000018806	DDX42	100	84.900	Sphenodon_punctatus
ENSMOCG00000015504	Ddx42	92	75.465	ENSSPAG00000013055	ddx42	99	72.473	Stegastes_partitus
ENSMOCG00000015504	Ddx42	85	91.315	ENSSSCG00000017289	DDX42	97	92.184	Sus_scrofa
ENSMOCG00000015504	Ddx42	100	83.106	ENSTGUG00000001931	DDX42	100	83.106	Taeniopygia_guttata
ENSMOCG00000015504	Ddx42	99	70.334	ENSTRUG00000010711	ddx42	99	79.431	Takifugu_rubripes
ENSMOCG00000015504	Ddx42	82	93.035	ENSTBEG00000010159	DDX42	100	93.035	Tupaia_belangeri
ENSMOCG00000015504	Ddx42	100	93.697	ENSTTRG00000006962	DDX42	100	93.376	Tursiops_truncatus
ENSMOCG00000015504	Ddx42	100	93.803	ENSUAMG00000007321	DDX42	100	94.017	Ursus_americanus
ENSMOCG00000015504	Ddx42	100	92.949	ENSUMAG00000017438	DDX42	100	93.162	Ursus_maritimus
ENSMOCG00000015504	Ddx42	100	84.385	ENSVPAG00000009633	DDX42	100	84.492	Vicugna_pacos
ENSMOCG00000015504	Ddx42	100	94.011	ENSVVUG00000006095	DDX42	100	94.118	Vulpes_vulpes
ENSMOCG00000015504	Ddx42	100	76.866	ENSXETG00000003245	ddx42	100	76.551	Xenopus_tropicalis
ENSMOCG00000015504	Ddx42	84	71.264	ENSXCOG00000017560	ddx42	97	71.939	Xiphophorus_couchianus
ENSMOCG00000015504	Ddx42	99	71.875	ENSXMAG00000008138	ddx42	99	72.659	Xiphophorus_maculatus