EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000015553 (Gene tree)
Gene ID: 101996191
Gene Symbol: -
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 15433 bases
Position: chr5:15179259-15194691
Accession: 101996191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000016736	RRM_1	PF00076.22	5.6e-29	1	3
ENSMOCP00000016736	RRM_1	PF00076.22	5.6e-29	2	3
ENSMOCP00000016736	RRM_1	PF00076.22	5.6e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000020519	-	3464	XM_005346877	ENSMOCP00000016736	742 (aa)	XP_005346934	UPI00038C5A0A

Gene Model

Click here to download ENSMOCG00000015553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000015553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000015553	-	66	43.761	ENSMOCG00000018087	Raver2	81	44.080

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000015553	-	100	90.027	ENSG00000161847	RAVER1	100	89.757	Homo_sapiens
ENSMOCG00000015553	-	77	58.084	ENSAPOG00000017267	raver1	72	57.400	Acanthochromis_polyacanthus
ENSMOCG00000015553	-	100	89.353	ENSAMEG00000011738	RAVER1	98	89.353	Ailuropoda_melanoleuca
ENSMOCG00000015553	-	77	58.228	ENSAOCG00000005128	raver1	77	57.948	Amphiprion_ocellaris
ENSMOCG00000015553	-	76	62.338	ENSAPEG00000010854	raver1	83	62.338	Amphiprion_percula
ENSMOCG00000015553	-	100	50.397	ENSATEG00000021004	raver1	91	50.275	Anabas_testudineus
ENSMOCG00000015553	-	84	58.896	ENSACAG00000008386	-	91	59.517	Anolis_carolinensis
ENSMOCG00000015553	-	100	89.623	ENSANAG00000028226	RAVER1	98	89.757	Aotus_nancymaae
ENSMOCG00000015553	-	73	87.500	ENSACLG00000018492	raver1	76	87.500	Astatotilapia_calliptera
ENSMOCG00000015553	-	79	80.000	ENSAMXG00000005132	raver1	81	75.000	Astyanax_mexicanus
ENSMOCG00000015553	-	100	88.275	ENSBTAG00000015721	RAVER1	97	93.250	Bos_taurus
ENSMOCG00000015553	-	100	89.623	ENSCJAG00000005671	RAVER1	98	89.757	Callithrix_jacchus
ENSMOCG00000015553	-	100	88.544	ENSCAFG00000017861	RAVER1	98	88.949	Canis_familiaris
ENSMOCG00000015553	-	100	88.544	ENSCAFG00020024449	RAVER1	100	88.949	Canis_lupus_dingo
ENSMOCG00000015553	-	100	87.736	ENSCHIG00000006718	RAVER1	100	88.005	Capra_hircus
ENSMOCG00000015553	-	91	84.071	ENSTSYG00000027107	RAVER1	100	83.628	Carlito_syrichta
ENSMOCG00000015553	-	90	88.042	ENSCAPG00000002269	RAVER1	100	88.789	Cavia_aperea
ENSMOCG00000015553	-	100	90.162	ENSCPOG00000001008	RAVER1	100	90.836	Cavia_porcellus
ENSMOCG00000015553	-	100	89.353	ENSCCAG00000031723	RAVER1	98	89.623	Cebus_capucinus
ENSMOCG00000015553	-	100	89.892	ENSCATG00000043863	RAVER1	98	90.162	Cercocebus_atys
ENSMOCG00000015553	-	100	90.983	ENSCLAG00000009336	RAVER1	100	90.579	Chinchilla_lanigera
ENSMOCG00000015553	-	100	90.027	ENSCSAG00000007317	RAVER1	84	90.296	Chlorocebus_sabaeus
ENSMOCG00000015553	-	96	61.814	ENSCPBG00000005349	-	96	60.997	Chrysemys_picta_bellii
ENSMOCG00000015553	-	100	90.162	ENSCANG00000008337	RAVER1	98	90.431	Colobus_angolensis_palliatus
ENSMOCG00000015553	-	100	97.844	ENSCGRG00001013260	-	100	97.844	Cricetulus_griseus_chok1gshd
ENSMOCG00000015553	-	100	97.844	ENSCGRG00000015138	-	100	97.844	Cricetulus_griseus_crigri
ENSMOCG00000015553	-	74	80.769	ENSCSEG00000021092	raver1	76	80.769	Cynoglossus_semilaevis
ENSMOCG00000015553	-	98	49.597	ENSCVAG00000013971	raver1	81	61.616	Cyprinodon_variegatus
ENSMOCG00000015553	-	100	81.686	ENSDORG00000010106	-	100	80.764	Dipodomys_ordii
ENSMOCG00000015553	-	67	71.951	ENSETEG00000008201	-	74	87.437	Echinops_telfairi
ENSMOCG00000015553	-	65	93.797	ENSEASG00005010544	-	93	89.607	Equus_asinus_asinus
ENSMOCG00000015553	-	100	91.509	ENSECAG00000024966	RAVER1	98	91.509	Equus_caballus
ENSMOCG00000015553	-	98	51.160	ENSELUG00000023287	raver1	79	60.000	Esox_lucius
ENSMOCG00000015553	-	100	90.701	ENSFCAG00000009435	RAVER1	98	90.701	Felis_catus
ENSMOCG00000015553	-	100	90.040	ENSFDAG00000015113	RAVER1	100	90.040	Fukomys_damarensis
ENSMOCG00000015553	-	98	49.665	ENSGMOG00000003649	raver1	81	60.825	Gadus_morhua
ENSMOCG00000015553	-	66	44.890	ENSGALG00000050608	-	52	44.779	Gallus_gallus
ENSMOCG00000015553	-	96	62.051	ENSGAGG00000011748	-	96	76.344	Gopherus_agassizii
ENSMOCG00000015553	-	100	89.757	ENSGGOG00000006015	RAVER1	98	89.488	Gorilla_gorilla
ENSMOCG00000015553	-	73	84.314	ENSHBUG00000021210	raver1	76	84.314	Haplochromis_burtoni
ENSMOCG00000015553	-	100	90.175	ENSHGLG00000015460	RAVER1	100	89.771	Heterocephalus_glaber_female
ENSMOCG00000015553	-	100	90.175	ENSHGLG00100000812	RAVER1	100	89.771	Heterocephalus_glaber_male
ENSMOCG00000015553	-	98	49.523	ENSHCOG00000000449	raver1	89	50.617	Hippocampus_comes
ENSMOCG00000015553	-	98	52.381	ENSIPUG00000013153	raver1	81	61.134	Ictalurus_punctatus
ENSMOCG00000015553	-	100	90.323	ENSSTOG00000003241	RAVER1	100	90.860	Ictidomys_tridecemlineatus
ENSMOCG00000015553	-	100	91.946	ENSJJAG00000018219	-	100	91.812	Jaculus_jaculus
ENSMOCG00000015553	-	98	49.800	ENSKMAG00000017355	raver1	91	49.054	Kryptolebias_marmoratus
ENSMOCG00000015553	-	68	58.580	ENSLBEG00000008268	raver1	68	57.540	Labrus_bergylta
ENSMOCG00000015553	-	90	60.976	ENSLACG00000005809	-	99	61.406	Latimeria_chalumnae
ENSMOCG00000015553	-	96	55.989	ENSLOCG00000007500	raver1	92	55.316	Lepisosteus_oculatus
ENSMOCG00000015553	-	100	89.098	ENSLAFG00000003664	-	100	89.367	Loxodonta_africana
ENSMOCG00000015553	-	100	89.488	ENSMFAG00000037977	RAVER1	98	89.757	Macaca_fascicularis
ENSMOCG00000015553	-	100	89.757	ENSMMUG00000014897	RAVER1	98	90.027	Macaca_mulatta
ENSMOCG00000015553	-	100	89.757	ENSMNEG00000028390	RAVER1	98	90.027	Macaca_nemestrina
ENSMOCG00000015553	-	100	89.757	ENSMLEG00000041959	RAVER1	98	90.027	Mandrillus_leucophaeus
ENSMOCG00000015553	-	74	79.245	ENSMAMG00000012059	raver1	76	79.245	Mastacembelus_armatus
ENSMOCG00000015553	-	73	87.500	ENSMZEG00005019002	raver1	76	87.500	Maylandia_zebra
ENSMOCG00000015553	-	100	96.640	ENSMAUG00000017948	-	100	96.640	Mesocricetus_auratus
ENSMOCG00000015553	-	99	88.259	ENSMICG00000010326	RAVER1	99	88.259	Microcebus_murinus
ENSMOCG00000015553	-	99	50.399	ENSMMOG00000012093	raver1	77	72.581	Mola_mola
ENSMOCG00000015553	-	97	75.069	ENSMODG00000005584	-	89	74.656	Monodelphis_domestica
ENSMOCG00000015553	-	99	49.798	ENSMALG00000016569	raver1	80	58.400	Monopterus_albus
ENSMOCG00000015553	-	100	95.321	MGP_CAROLIEiJ_G0031860	-	100	95.321	Mus_caroli
ENSMOCG00000015553	-	100	95.722	ENSMUSG00000010205	Raver1	100	95.722	Mus_musculus
ENSMOCG00000015553	-	100	94.282	MGP_PahariEiJ_G0014726	-	100	95.213	Mus_pahari
ENSMOCG00000015553	-	100	95.588	MGP_SPRETEiJ_G0032984	-	100	95.588	Mus_spretus
ENSMOCG00000015553	-	100	90.162	ENSMPUG00000006712	RAVER1	98	90.162	Mustela_putorius_furo
ENSMOCG00000015553	-	100	87.601	ENSMLUG00000012328	RAVER1	100	88.005	Myotis_lucifugus
ENSMOCG00000015553	-	100	92.194	ENSNGAG00000001260	-	100	92.194	Nannospalax_galili
ENSMOCG00000015553	-	77	65.000	ENSNBRG00000010139	raver1	78	58.586	Neolamprologus_brichardi
ENSMOCG00000015553	-	100	89.353	ENSNLEG00000012181	RAVER1	98	89.623	Nomascus_leucogenys
ENSMOCG00000015553	-	90	74.408	ENSMEUG00000003281	-	100	73.373	Notamacropus_eugenii
ENSMOCG00000015553	-	51	84.375	ENSOPRG00000005855	-	51	84.375	Ochotona_princeps
ENSMOCG00000015553	-	100	90.310	ENSODEG00000016260	RAVER1	100	89.906	Octodon_degus
ENSMOCG00000015553	-	77	63.750	ENSONIG00000001559	raver1	99	51.023	Oreochromis_niloticus
ENSMOCG00000015553	-	100	82.884	ENSOCUG00000020918	RAVER1	100	81.806	Oryctolagus_cuniculus
ENSMOCG00000015553	-	98	49.597	ENSORLG00000005458	raver1	67	66.247	Oryzias_latipes
ENSMOCG00000015553	-	68	64.964	ENSORLG00020004392	raver1	67	65.995	Oryzias_latipes_hni
ENSMOCG00000015553	-	68	64.720	ENSORLG00015017222	raver1	67	65.743	Oryzias_latipes_hsok
ENSMOCG00000015553	-	72	83.673	ENSOMEG00000023956	raver1	67	83.673	Oryzias_melastigma
ENSMOCG00000015553	-	100	89.218	ENSOGAG00000011071	RAVER1	98	88.949	Otolemur_garnettii
ENSMOCG00000015553	-	100	86.253	ENSOARG00000015886	RAVER1	98	86.119	Ovis_aries
ENSMOCG00000015553	-	100	90.027	ENSPPAG00000002611	RAVER1	98	89.757	Pan_paniscus
ENSMOCG00000015553	-	100	91.105	ENSPPRG00000009912	RAVER1	98	91.105	Panthera_pardus
ENSMOCG00000015553	-	100	90.027	ENSPTRG00000010466	RAVER1	98	89.757	Pan_troglodytes
ENSMOCG00000015553	-	100	89.757	ENSPANG00000004122	RAVER1	98	90.027	Papio_anubis
ENSMOCG00000015553	-	100	97.443	ENSPEMG00000016411	-	100	97.443	Peromyscus_maniculatus_bairdii
ENSMOCG00000015553	-	100	76.769	ENSPCIG00000018695	-	99	80.263	Phascolarctos_cinereus
ENSMOCG00000015553	-	100	46.806	ENSPLAG00000020793	raver1	79	56.805	Poecilia_latipinna
ENSMOCG00000015553	-	100	51.523	ENSPMEG00000011220	raver1	67	67.259	Poecilia_mexicana
ENSMOCG00000015553	-	74	90.698	ENSPREG00000006864	raver1	77	90.698	Poecilia_reticulata
ENSMOCG00000015553	-	100	88.679	ENSPPYG00000010514	RAVER1	84	88.949	Pongo_abelii
ENSMOCG00000015553	-	100	89.919	ENSPCOG00000026605	RAVER1	98	90.188	Propithecus_coquereli
ENSMOCG00000015553	-	100	89.353	ENSPVAG00000003689	RAVER1	100	89.488	Pteropus_vampyrus
ENSMOCG00000015553	-	63	84.314	ENSPNYG00000013284	raver1	65	84.314	Pundamilia_nyererei
ENSMOCG00000015553	-	96	52.740	ENSPNAG00000015476	raver1	91	52.459	Pygocentrus_nattereri
ENSMOCG00000015553	-	100	96.123	ENSRNOG00000020710	Raver1	100	96.123	Rattus_norvegicus
ENSMOCG00000015553	-	100	89.892	ENSRBIG00000034702	RAVER1	98	90.027	Rhinopithecus_bieti
ENSMOCG00000015553	-	100	88.005	ENSRROG00000031186	RAVER1	98	87.601	Rhinopithecus_roxellana
ENSMOCG00000015553	-	100	87.062	ENSSBOG00000023423	RAVER1	98	86.523	Saimiri_boliviensis_boliviensis
ENSMOCG00000015553	-	90	75.552	ENSSHAG00000008181	-	90	74.816	Sarcophilus_harrisii
ENSMOCG00000015553	-	82	55.473	ENSSDUG00000021063	raver1	83	56.522	Seriola_dumerili
ENSMOCG00000015553	-	68	58.721	ENSSLDG00000014505	raver1	66	57.708	Seriola_lalandi_dorsalis
ENSMOCG00000015553	-	77	61.905	ENSSPAG00000000688	raver1	82	57.798	Stegastes_partitus
ENSMOCG00000015553	-	100	90.566	ENSSSCG00000013650	-	98	90.836	Sus_scrofa
ENSMOCG00000015553	-	98	50.203	ENSTRUG00000025641	raver1	78	59.000	Takifugu_rubripes
ENSMOCG00000015553	-	100	89.353	ENSTTRG00000009552	RAVER1	100	89.892	Tursiops_truncatus
ENSMOCG00000015553	-	100	90.970	ENSUAMG00000020385	RAVER1	98	90.970	Ursus_americanus
ENSMOCG00000015553	-	100	88.544	ENSVVUG00000028976	RAVER1	98	88.949	Vulpes_vulpes
ENSMOCG00000015553	-	100	55.308	ENSXETG00000011622	raver1	95	55.525	Xenopus_tropicalis
ENSMOCG00000015553	-	99	51.478	ENSXCOG00000016368	raver1	77	60.606	Xiphophorus_couchianus