EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000015555 (Gene tree)
Gene ID: 101984002
Gene Symbol: Snrnp48
Alias: 1110050F08Rik|6530403A03Rik
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 22694 bases
Position: chr16:42475085-42497778
Accession: 101984002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000016743	zf-U11-48K	PF05253.12	1.1e-09	1	1
ENSMOCP00000016741	zf-U11-48K	PF05253.12	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000020525	-	1172	XM_005355057	ENSMOCP00000016741	336 (aa)	XP_005355114	UPI00038C551D
ENSMOCT00000020527	-	834	-	ENSMOCP00000016743	277 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000015555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000015555's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000015555	Snrnp48	100	87.906	ENSG00000168566	SNRNP48	100	88.791	Homo_sapiens
ENSMOCG00000015555	Snrnp48	82	47.719	ENSAPOG00000021430	snrnp48	96	44.186	Acanthochromis_polyacanthus
ENSMOCG00000015555	Snrnp48	99	85.014	ENSAMEG00000017349	SNRNP48	100	85.303	Ailuropoda_melanoleuca
ENSMOCG00000015555	Snrnp48	89	45.667	ENSACIG00000002032	snrnp48	96	42.308	Amphilophus_citrinellus
ENSMOCG00000015555	Snrnp48	82	47.368	ENSAOCG00000010562	snrnp48	96	43.391	Amphiprion_ocellaris
ENSMOCG00000015555	Snrnp48	82	48.057	ENSAPEG00000003231	snrnp48	96	44.220	Amphiprion_percula
ENSMOCG00000015555	Snrnp48	71	52.263	ENSATEG00000020210	snrnp48	81	49.822	Anabas_testudineus
ENSMOCG00000015555	Snrnp48	82	63.889	ENSACAG00000002811	SNRNP48	89	63.889	Anolis_carolinensis
ENSMOCG00000015555	Snrnp48	100	87.316	ENSANAG00000033538	SNRNP48	100	88.201	Aotus_nancymaae
ENSMOCG00000015555	Snrnp48	94	46.296	ENSAMXG00000015309	snrnp48	98	44.575	Astyanax_mexicanus
ENSMOCG00000015555	Snrnp48	100	82.941	ENSBTAG00000001123	SNRNP48	100	83.824	Bos_taurus
ENSMOCG00000015555	Snrnp48	100	87.906	ENSCJAG00000021330	SNRNP48	100	88.791	Callithrix_jacchus
ENSMOCG00000015555	Snrnp48	99	87.798	ENSCAFG00000009574	SNRNP48	83	88.095	Canis_familiaris
ENSMOCG00000015555	Snrnp48	99	88.095	ENSCAFG00020013203	SNRNP48	99	88.393	Canis_lupus_dingo
ENSMOCG00000015555	Snrnp48	100	84.412	ENSCHIG00000015216	SNRNP48	100	85.294	Capra_hircus
ENSMOCG00000015555	Snrnp48	100	87.021	ENSTSYG00000000698	SNRNP48	100	87.906	Carlito_syrichta
ENSMOCG00000015555	Snrnp48	90	82.410	ENSCAPG00000006768	SNRNP48	100	82.410	Cavia_aperea
ENSMOCG00000015555	Snrnp48	100	86.136	ENSCPOG00000007910	SNRNP48	100	86.136	Cavia_porcellus
ENSMOCG00000015555	Snrnp48	100	86.431	ENSCCAG00000035652	SNRNP48	100	87.316	Cebus_capucinus
ENSMOCG00000015555	Snrnp48	100	87.316	ENSCATG00000033947	SNRNP48	100	88.201	Cercocebus_atys
ENSMOCG00000015555	Snrnp48	100	86.431	ENSCLAG00000003765	SNRNP48	100	87.316	Chinchilla_lanigera
ENSMOCG00000015555	Snrnp48	100	87.906	ENSCSAG00000007409	SNRNP48	100	88.791	Chlorocebus_sabaeus
ENSMOCG00000015555	Snrnp48	85	63.907	ENSCPBG00000019146	SNRNP48	92	63.907	Chrysemys_picta_bellii
ENSMOCG00000015555	Snrnp48	100	87.906	ENSCANG00000030017	SNRNP48	100	88.791	Colobus_angolensis_palliatus
ENSMOCG00000015555	Snrnp48	100	95.846	ENSCGRG00001001076	-	100	95.846	Cricetulus_griseus_chok1gshd
ENSMOCG00000015555	Snrnp48	99	75.075	ENSCGRG00001008805	-	95	73.874	Cricetulus_griseus_chok1gshd
ENSMOCG00000015555	Snrnp48	100	95.846	ENSCGRG00000007781	Snrnp48	100	95.846	Cricetulus_griseus_crigri
ENSMOCG00000015555	Snrnp48	77	47.909	ENSCSEG00000000722	snrnp48	91	32.164	Cynoglossus_semilaevis
ENSMOCG00000015555	Snrnp48	96	43.149	ENSCVAG00000019829	snrnp48	89	41.360	Cyprinodon_variegatus
ENSMOCG00000015555	Snrnp48	82	45.390	ENSDARG00000039989	snrnp48	92	43.533	Danio_rerio
ENSMOCG00000015555	Snrnp48	99	85.970	ENSDNOG00000014978	SNRNP48	99	86.567	Dasypus_novemcinctus
ENSMOCG00000015555	Snrnp48	99	86.726	ENSDORG00000015140	Snrnp48	99	86.726	Dipodomys_ordii
ENSMOCG00000015555	Snrnp48	69	33.503	ENSEBUG00000016376	-	84	33.493	Eptatretus_burgeri
ENSMOCG00000015555	Snrnp48	99	87.574	ENSEASG00005012021	SNRNP48	99	87.870	Equus_asinus_asinus
ENSMOCG00000015555	Snrnp48	100	88.201	ENSECAG00000026937	SNRNP48	100	88.496	Equus_caballus
ENSMOCG00000015555	Snrnp48	100	78.788	ENSEEUG00000015437	SNRNP48	99	66.272	Erinaceus_europaeus
ENSMOCG00000015555	Snrnp48	88	46.732	ENSELUG00000009766	snrnp48	78	47.887	Esox_lucius
ENSMOCG00000015555	Snrnp48	100	88.201	ENSFCAG00000018853	SNRNP48	100	88.496	Felis_catus
ENSMOCG00000015555	Snrnp48	83	63.699	ENSFALG00000007797	SNRNP48	93	64.384	Ficedula_albicollis
ENSMOCG00000015555	Snrnp48	99	84.320	ENSFDAG00000009231	SNRNP48	100	85.841	Fukomys_damarensis
ENSMOCG00000015555	Snrnp48	60	56.158	ENSFHEG00000014647	snrnp48	97	46.801	Fundulus_heteroclitus
ENSMOCG00000015555	Snrnp48	75	47.638	ENSGMOG00000018599	-	100	42.683	Gadus_morhua
ENSMOCG00000015555	Snrnp48	76	66.415	ENSGALG00000013005	SNRNP48	90	66.415	Gallus_gallus
ENSMOCG00000015555	Snrnp48	84	47.535	ENSGAFG00000021639	snrnp48	93	44.311	Gambusia_affinis
ENSMOCG00000015555	Snrnp48	76	49.416	ENSGACG00000017756	-	95	45.231	Gasterosteus_aculeatus
ENSMOCG00000015555	Snrnp48	84	63.333	ENSGAGG00000000865	SNRNP48	97	63.333	Gopherus_agassizii
ENSMOCG00000015555	Snrnp48	100	87.906	ENSGGOG00000013220	SNRNP48	100	88.791	Gorilla_gorilla
ENSMOCG00000015555	Snrnp48	76	48.837	ENSHBUG00000017066	snrnp48	95	43.452	Haplochromis_burtoni
ENSMOCG00000015555	Snrnp48	99	86.095	ENSHGLG00000015241	SNRNP48	100	86.726	Heterocephalus_glaber_female
ENSMOCG00000015555	Snrnp48	99	86.095	ENSHGLG00100010027	SNRNP48	100	86.726	Heterocephalus_glaber_male
ENSMOCG00000015555	Snrnp48	76	45.525	ENSHCOG00000014066	snrnp48	92	41.279	Hippocampus_comes
ENSMOCG00000015555	Snrnp48	100	90.855	ENSSTOG00000014635	SNRNP48	100	91.740	Ictidomys_tridecemlineatus
ENSMOCG00000015555	Snrnp48	100	85.546	ENSJJAG00000011495	Snrnp48	100	85.841	Jaculus_jaculus
ENSMOCG00000015555	Snrnp48	96	42.945	ENSKMAG00000016514	snrnp48	95	43.675	Kryptolebias_marmoratus
ENSMOCG00000015555	Snrnp48	77	48.092	ENSLBEG00000026249	snrnp48	95	43.750	Labrus_bergylta
ENSMOCG00000015555	Snrnp48	98	53.293	ENSLACG00000003958	SNRNP48	99	52.187	Latimeria_chalumnae
ENSMOCG00000015555	Snrnp48	84	53.287	ENSLOCG00000004187	snrnp48	99	48.997	Lepisosteus_oculatus
ENSMOCG00000015555	Snrnp48	100	83.776	ENSLAFG00000011152	SNRNP48	100	84.661	Loxodonta_africana
ENSMOCG00000015555	Snrnp48	100	88.201	ENSMFAG00000045216	SNRNP48	100	89.086	Macaca_fascicularis
ENSMOCG00000015555	Snrnp48	100	88.201	ENSMMUG00000014785	SNRNP48	100	89.086	Macaca_mulatta
ENSMOCG00000015555	Snrnp48	100	87.906	ENSMNEG00000042269	SNRNP48	100	88.791	Macaca_nemestrina
ENSMOCG00000015555	Snrnp48	100	88.201	ENSMLEG00000034004	SNRNP48	100	89.086	Mandrillus_leucophaeus
ENSMOCG00000015555	Snrnp48	76	49.027	ENSMAMG00000018673	snrnp48	83	43.605	Mastacembelus_armatus
ENSMOCG00000015555	Snrnp48	82	64.505	ENSMGAG00000006037	SNRNP48	99	65.068	Meleagris_gallopavo
ENSMOCG00000015555	Snrnp48	100	96.726	ENSMAUG00000011944	Snrnp48	100	96.726	Mesocricetus_auratus
ENSMOCG00000015555	Snrnp48	100	86.726	ENSMICG00000012497	SNRNP48	100	87.611	Microcebus_murinus
ENSMOCG00000015555	Snrnp48	54	53.763	ENSMMOG00000003072	-	58	53.763	Mola_mola
ENSMOCG00000015555	Snrnp48	99	70.520	ENSMODG00000009996	SNRNP48	93	70.809	Monodelphis_domestica
ENSMOCG00000015555	Snrnp48	78	49.242	ENSMALG00000005725	snrnp48	95	42.651	Monopterus_albus
ENSMOCG00000015555	Snrnp48	100	94.065	MGP_CAROLIEiJ_G0018441	Snrnp48	100	94.065	Mus_caroli
ENSMOCG00000015555	Snrnp48	100	93.472	ENSMUSG00000021431	Snrnp48	100	93.472	Mus_musculus
ENSMOCG00000015555	Snrnp48	100	94.065	MGP_PahariEiJ_G0019509	Snrnp48	100	94.065	Mus_pahari
ENSMOCG00000015555	Snrnp48	100	92.878	MGP_SPRETEiJ_G0019321	Snrnp48	100	92.878	Mus_spretus
ENSMOCG00000015555	Snrnp48	99	90.533	ENSNGAG00000004849	Snrnp48	99	90.533	Nannospalax_galili
ENSMOCG00000015555	Snrnp48	76	48.450	ENSNBRG00000012127	snrnp48	95	43.155	Neolamprologus_brichardi
ENSMOCG00000015555	Snrnp48	100	88.201	ENSNLEG00000011667	SNRNP48	100	89.086	Nomascus_leucogenys
ENSMOCG00000015555	Snrnp48	95	79.567	ENSOPRG00000015471	SNRNP48	100	78.947	Ochotona_princeps
ENSMOCG00000015555	Snrnp48	96	45.062	ENSONIG00000001520	snrnp48	95	43.452	Oreochromis_niloticus
ENSMOCG00000015555	Snrnp48	64	59.162	ENSOANG00000019888	-	100	62.500	Ornithorhynchus_anatinus
ENSMOCG00000015555	Snrnp48	85	89.161	ENSOCUG00000005168	SNRNP48	100	88.816	Oryctolagus_cuniculus
ENSMOCG00000015555	Snrnp48	98	43.695	ENSORLG00000015654	snrnp48	96	44.606	Oryzias_latipes
ENSMOCG00000015555	Snrnp48	89	46.774	ENSORLG00020015976	snrnp48	82	44.023	Oryzias_latipes_hni
ENSMOCG00000015555	Snrnp48	98	45.161	ENSORLG00015022379	snrnp48	82	45.190	Oryzias_latipes_hsok
ENSMOCG00000015555	Snrnp48	84	48.454	ENSOMEG00000022007	snrnp48	95	44.509	Oryzias_melastigma
ENSMOCG00000015555	Snrnp48	91	86.928	ENSOGAG00000005275	SNRNP48	96	86.751	Otolemur_garnettii
ENSMOCG00000015555	Snrnp48	85	85.366	ENSOARG00000017319	SNRNP48	100	85.366	Ovis_aries
ENSMOCG00000015555	Snrnp48	100	88.201	ENSPPAG00000032873	SNRNP48	100	89.086	Pan_paniscus
ENSMOCG00000015555	Snrnp48	100	87.906	ENSPPRG00000004283	SNRNP48	100	88.201	Panthera_pardus
ENSMOCG00000015555	Snrnp48	85	87.805	ENSPTIG00000013502	SNRNP48	100	88.153	Panthera_tigris_altaica
ENSMOCG00000015555	Snrnp48	100	88.201	ENSPTRG00000017703	SNRNP48	100	89.086	Pan_troglodytes
ENSMOCG00000015555	Snrnp48	100	88.201	ENSPANG00000000771	SNRNP48	100	89.086	Papio_anubis
ENSMOCG00000015555	Snrnp48	94	46.588	ENSPKIG00000013703	snrnp48	65	46.588	Paramormyrops_kingsleyae
ENSMOCG00000015555	Snrnp48	88	62.222	ENSPSIG00000002213	SNRNP48	97	61.783	Pelodiscus_sinensis
ENSMOCG00000015555	Snrnp48	73	48.996	ENSPMGG00000008120	snrnp48	86	48.996	Periophthalmus_magnuspinnatus
ENSMOCG00000015555	Snrnp48	100	96.736	ENSPEMG00000008872	Snrnp48	100	96.736	Peromyscus_maniculatus_bairdii
ENSMOCG00000015555	Snrnp48	84	48.592	ENSPFOG00000003578	snrnp48	93	45.619	Poecilia_formosa
ENSMOCG00000015555	Snrnp48	95	33.569	ENSPLAG00000002290	snrnp48	79	49.787	Poecilia_latipinna
ENSMOCG00000015555	Snrnp48	84	48.239	ENSPMEG00000018033	snrnp48	93	45.317	Poecilia_mexicana
ENSMOCG00000015555	Snrnp48	74	50.397	ENSPREG00000018541	snrnp48	93	45.428	Poecilia_reticulata
ENSMOCG00000015555	Snrnp48	100	86.726	ENSPPYG00000016209	SNRNP48	100	87.611	Pongo_abelii
ENSMOCG00000015555	Snrnp48	79	68.914	ENSPCAG00000011991	SNRNP48	99	68.914	Procavia_capensis
ENSMOCG00000015555	Snrnp48	100	85.841	ENSPVAG00000002854	SNRNP48	100	86.136	Pteropus_vampyrus
ENSMOCG00000015555	Snrnp48	76	48.837	ENSPNYG00000015399	snrnp48	89	46.853	Pundamilia_nyererei
ENSMOCG00000015555	Snrnp48	100	93.769	ENSRNOG00000013756	Snrnp48	100	93.769	Rattus_norvegicus
ENSMOCG00000015555	Snrnp48	92	88.710	ENSRBIG00000043856	SNRNP48	98	88.710	Rhinopithecus_bieti
ENSMOCG00000015555	Snrnp48	100	87.906	ENSRROG00000043229	SNRNP48	100	88.791	Rhinopithecus_roxellana
ENSMOCG00000015555	Snrnp48	100	87.906	ENSSBOG00000019486	SNRNP48	100	88.791	Saimiri_boliviensis_boliviensis
ENSMOCG00000015555	Snrnp48	98	71.221	ENSSHAG00000014483	SNRNP48	99	71.221	Sarcophilus_harrisii
ENSMOCG00000015555	Snrnp48	74	51.575	ENSSFOG00015006610	snrnp48	72	47.727	Scleropages_formosus
ENSMOCG00000015555	Snrnp48	89	46.512	ENSSDUG00000014953	snrnp48	96	44.868	Seriola_dumerili
ENSMOCG00000015555	Snrnp48	89	46.512	ENSSLDG00000005989	snrnp48	96	44.868	Seriola_lalandi_dorsalis
ENSMOCG00000015555	Snrnp48	84	63.087	ENSSPUG00000006257	SNRNP48	85	64.765	Sphenodon_punctatus
ENSMOCG00000015555	Snrnp48	81	47.464	ENSSPAG00000006454	snrnp48	93	43.807	Stegastes_partitus
ENSMOCG00000015555	Snrnp48	83	63.230	ENSTGUG00000007575	SNRNP48	93	63.230	Taeniopygia_guttata
ENSMOCG00000015555	Snrnp48	74	49.603	ENSTRUG00000007031	snrnp48	92	46.037	Takifugu_rubripes
ENSMOCG00000015555	Snrnp48	76	47.082	ENSTNIG00000012977	-	76	47.082	Tetraodon_nigroviridis
ENSMOCG00000015555	Snrnp48	100	72.485	ENSTBEG00000015620	SNRNP48	100	72.485	Tupaia_belangeri
ENSMOCG00000015555	Snrnp48	100	87.316	ENSTTRG00000016715	SNRNP48	100	87.316	Tursiops_truncatus
ENSMOCG00000015555	Snrnp48	100	87.906	ENSUAMG00000003690	SNRNP48	100	87.906	Ursus_americanus
ENSMOCG00000015555	Snrnp48	85	83.624	ENSVPAG00000003557	SNRNP48	100	83.624	Vicugna_pacos
ENSMOCG00000015555	Snrnp48	99	88.095	ENSVVUG00000004996	SNRNP48	99	88.393	Vulpes_vulpes
ENSMOCG00000015555	Snrnp48	86	53.691	ENSXETG00000020447	snrnp48	97	51.786	Xenopus_tropicalis
ENSMOCG00000015555	Snrnp48	69	49.576	ENSXCOG00000004478	snrnp48	93	42.771	Xiphophorus_couchianus
ENSMOCG00000015555	Snrnp48	84	48.592	ENSXMAG00000013595	snrnp48	93	45.723	Xiphophorus_maculatus