EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000015623 (Gene tree)
Gene ID: 101986153
Gene Symbol: Hnrnpu
Alias: Hnrpu|Sp120|scaffold attachment factor A
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 9896 bases
Position: chr6:86215493-86225388
Accession: 101986153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000016845	SAP	PF02037.27	1.6e-10	1	1
ENSMOCP00000016843	SAP	PF02037.27	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000020628	-	3643	XM_005348986	ENSMOCP00000016843	797 (aa)	XP_005349043	UPI00038C5085
ENSMOCT00000020630	-	2436	-	ENSMOCP00000016845	811 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000015623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000015623's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000015623	Hnrnpu	55	59.318	ENSMOCG00000008200	Hnrnpul1	59	52.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000015623	Hnrnpu	100	95.658	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSMOCG00000015623	Hnrnpu	79	83.721	ENSAPOG00000017400	hnrnpub	83	58.371	Acanthochromis_polyacanthus
ENSMOCG00000015623	Hnrnpu	100	92.448	ENSAMEG00000009145	HNRNPU	100	92.935	Ailuropoda_melanoleuca
ENSMOCG00000015623	Hnrnpu	77	80.851	ENSACIG00000012138	hnrnpub	93	62.857	Amphilophus_citrinellus
ENSMOCG00000015623	Hnrnpu	99	50.465	ENSAOCG00000015843	hnrnpub	83	58.371	Amphiprion_ocellaris
ENSMOCG00000015623	Hnrnpu	99	50.465	ENSAPEG00000014679	hnrnpub	83	58.371	Amphiprion_percula
ENSMOCG00000015623	Hnrnpu	73	83.721	ENSATEG00000016178	hnrnpub	79	83.721	Anabas_testudineus
ENSMOCG00000015623	Hnrnpu	81	83.707	ENSACAG00000004511	HNRNPU	100	74.498	Anolis_carolinensis
ENSMOCG00000015623	Hnrnpu	100	96.005	ENSANAG00000033895	-	99	98.496	Aotus_nancymaae
ENSMOCG00000015623	Hnrnpu	79	78.723	ENSACLG00000008165	hnrnpub	88	78.723	Astatotilapia_calliptera
ENSMOCG00000015623	Hnrnpu	100	94.303	ENSBTAG00000007606	HNRNPU	98	96.071	Bos_taurus
ENSMOCG00000015623	Hnrnpu	100	93.818	ENSCJAG00000016914	HNRNPU	99	98.308	Callithrix_jacchus
ENSMOCG00000015623	Hnrnpu	100	96.154	ENSCAFG00020000918	HNRNPU	100	96.154	Canis_lupus_dingo
ENSMOCG00000015623	Hnrnpu	100	96.154	ENSCHIG00000004900	HNRNPU	100	96.154	Capra_hircus
ENSMOCG00000015623	Hnrnpu	100	94.282	ENSCPOG00000011887	HNRNPU	100	94.417	Cavia_porcellus
ENSMOCG00000015623	Hnrnpu	100	96.005	ENSCCAG00000037859	-	99	98.308	Cebus_capucinus
ENSMOCG00000015623	Hnrnpu	100	96.255	ENSCATG00000035273	HNRNPU	99	98.496	Cercocebus_atys
ENSMOCG00000015623	Hnrnpu	100	94.526	ENSCLAG00000007100	HNRNPU	100	94.660	Chinchilla_lanigera
ENSMOCG00000015623	Hnrnpu	100	95.533	ENSCSAG00000009219	HNRNPU	100	95.782	Chlorocebus_sabaeus
ENSMOCG00000015623	Hnrnpu	81	93.333	ENSCHOG00000001387	HNRNPU	78	93.333	Choloepus_hoffmanni
ENSMOCG00000015623	Hnrnpu	100	78.188	ENSCPBG00000009415	HNRNPU	98	80.500	Chrysemys_picta_bellii
ENSMOCG00000015623	Hnrnpu	100	93.258	ENSCANG00000022780	HNRNPU	100	93.883	Colobus_angolensis_palliatus
ENSMOCG00000015623	Hnrnpu	100	99.373	ENSCGRG00001020525	Hnrnpu	100	99.373	Cricetulus_griseus_chok1gshd
ENSMOCG00000015623	Hnrnpu	81	83.721	ENSCSEG00000010804	hnrnpub	95	78.261	Cynoglossus_semilaevis
ENSMOCG00000015623	Hnrnpu	82	71.429	ENSCVAG00000004280	hnrnpub	89	71.429	Cyprinodon_variegatus
ENSMOCG00000015623	Hnrnpu	81	64.706	ENSDARG00000015206	hnrnpua	89	64.706	Danio_rerio
ENSMOCG00000015623	Hnrnpu	82	61.656	ENSDARG00000004735	hnrnpub	87	81.395	Danio_rerio
ENSMOCG00000015623	Hnrnpu	83	98.992	ENSDNOG00000000215	HNRNPU	91	98.992	Dasypus_novemcinctus
ENSMOCG00000015623	Hnrnpu	100	92.289	ENSDORG00000015491	Hnrnpu	100	91.791	Dipodomys_ordii
ENSMOCG00000015623	Hnrnpu	100	91.687	ENSETEG00000014565	HNRNPU	100	90.943	Echinops_telfairi
ENSMOCG00000015623	Hnrnpu	100	96.154	ENSEASG00005003017	HNRNPU	100	96.154	Equus_asinus_asinus
ENSMOCG00000015623	Hnrnpu	100	96.030	ENSECAG00000007955	HNRNPU	100	96.030	Equus_caballus
ENSMOCG00000015623	Hnrnpu	76	56.860	ENSELUG00000010733	hnrnpub	82	56.693	Esox_lucius
ENSMOCG00000015623	Hnrnpu	99	51.241	ENSELUG00000011966	hnrnpua	66	81.395	Esox_lucius
ENSMOCG00000015623	Hnrnpu	100	95.901	ENSFCAG00000002156	HNRNPU	99	98.308	Felis_catus
ENSMOCG00000015623	Hnrnpu	83	98.653	ENSFDAG00000006026	HNRNPU	100	98.653	Fukomys_damarensis
ENSMOCG00000015623	Hnrnpu	80	69.643	ENSFHEG00000022639	hnrnpub	71	69.643	Fundulus_heteroclitus
ENSMOCG00000015623	Hnrnpu	76	57.387	ENSGMOG00000001755	hnrnpub	81	58.777	Gadus_morhua
ENSMOCG00000015623	Hnrnpu	100	77.948	ENSGALG00000010671	HNRNPU	100	78.143	Gallus_gallus
ENSMOCG00000015623	Hnrnpu	62	83.721	ENSGAFG00000009369	hnrnpub	86	83.721	Gambusia_affinis
ENSMOCG00000015623	Hnrnpu	79	58.689	ENSGACG00000004679	hnrnpub	99	49.941	Gasterosteus_aculeatus
ENSMOCG00000015623	Hnrnpu	100	95.381	ENSGGOG00000004061	HNRNPU	99	98.684	Gorilla_gorilla
ENSMOCG00000015623	Hnrnpu	79	78.723	ENSHBUG00000012290	hnrnpub	88	78.723	Haplochromis_burtoni
ENSMOCG00000015623	Hnrnpu	100	96.389	ENSHGLG00000010594	-	100	96.389	Heterocephalus_glaber_female
ENSMOCG00000015623	Hnrnpu	82	98.992	ENSHGLG00100015093	HNRNPU	100	98.992	Heterocephalus_glaber_male
ENSMOCG00000015623	Hnrnpu	78	83.333	ENSHCOG00000020091	hnrnpub	86	74.000	Hippocampus_comes
ENSMOCG00000015623	Hnrnpu	79	83.721	ENSIPUG00000007749	hnrnpu	95	68.421	Ictalurus_punctatus
ENSMOCG00000015623	Hnrnpu	100	94.390	ENSJJAG00000011371	Hnrnpu	100	94.032	Jaculus_jaculus
ENSMOCG00000015623	Hnrnpu	79	83.721	ENSKMAG00000004532	hnrnpub	91	59.459	Kryptolebias_marmoratus
ENSMOCG00000015623	Hnrnpu	75	56.399	ENSLBEG00000022520	hnrnpub	82	56.342	Labrus_bergylta
ENSMOCG00000015623	Hnrnpu	99	61.993	ENSLACG00000017463	HNRNPU	99	62.189	Latimeria_chalumnae
ENSMOCG00000015623	Hnrnpu	82	64.740	ENSLOCG00000016652	hnrnpua	99	55.556	Lepisosteus_oculatus
ENSMOCG00000015623	Hnrnpu	100	95.630	ENSLAFG00000021377	HNRNPU	100	95.630	Loxodonta_africana
ENSMOCG00000015623	Hnrnpu	100	96.255	ENSMFAG00000037308	HNRNPU	99	98.496	Macaca_fascicularis
ENSMOCG00000015623	Hnrnpu	100	95.880	ENSMMUG00000021098	HNRNPU	100	96.255	Macaca_mulatta
ENSMOCG00000015623	Hnrnpu	100	96.255	ENSMNEG00000043645	HNRNPU	99	98.496	Macaca_nemestrina
ENSMOCG00000015623	Hnrnpu	79	78.723	ENSMZEG00005003185	hnrnpub	88	78.723	Maylandia_zebra
ENSMOCG00000015623	Hnrnpu	100	99.016	ENSMAUG00000008842	Hnrnpu	100	99.016	Mesocricetus_auratus
ENSMOCG00000015623	Hnrnpu	100	96.380	ENSMICG00000004616	HNRNPU	99	98.872	Microcebus_murinus
ENSMOCG00000015623	Hnrnpu	100	88.118	ENSMODG00000006515	HNRNPU	100	88.615	Monodelphis_domestica
ENSMOCG00000015623	Hnrnpu	78	83.721	ENSMALG00000018243	hnrnpub	91	53.401	Monopterus_albus
ENSMOCG00000015623	Hnrnpu	100	98.750	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	98.750	Mus_caroli
ENSMOCG00000015623	Hnrnpu	100	98.875	ENSMUSG00000039630	Hnrnpu	100	98.875	Mus_musculus
ENSMOCG00000015623	Hnrnpu	100	98.127	MGP_PahariEiJ_G0028193	Hnrnpu	100	98.127	Mus_pahari
ENSMOCG00000015623	Hnrnpu	100	98.875	MGP_SPRETEiJ_G0015761	Hnrnpu	100	98.875	Mus_spretus
ENSMOCG00000015623	Hnrnpu	100	87.841	ENSMLUG00000000475	HNRNPU	100	87.224	Myotis_lucifugus
ENSMOCG00000015623	Hnrnpu	100	97.747	ENSNGAG00000019075	Hnrnpu	100	97.747	Nannospalax_galili
ENSMOCG00000015623	Hnrnpu	79	78.723	ENSNBRG00000017855	hnrnpub	88	78.723	Neolamprologus_brichardi
ENSMOCG00000015623	Hnrnpu	99	84.903	ENSMEUG00000000541	HNRNPU	99	85.330	Notamacropus_eugenii
ENSMOCG00000015623	Hnrnpu	70	95.588	ENSODEG00000014458	-	100	95.588	Octodon_degus
ENSMOCG00000015623	Hnrnpu	81	78.723	ENSONIG00000001260	hnrnpub	91	78.723	Oreochromis_niloticus
ENSMOCG00000015623	Hnrnpu	98	94.059	ENSOCUG00000014469	HNRNPU	93	93.812	Oryctolagus_cuniculus
ENSMOCG00000015623	Hnrnpu	81	83.721	ENSORLG00020005363	hnrnpub	88	83.721	Oryzias_latipes_hni
ENSMOCG00000015623	Hnrnpu	81	83.721	ENSORLG00015001190	hnrnpub	88	83.721	Oryzias_latipes_hsok
ENSMOCG00000015623	Hnrnpu	81	83.721	ENSOMEG00000014951	hnrnpub	88	83.721	Oryzias_melastigma
ENSMOCG00000015623	Hnrnpu	100	96.030	ENSOGAG00000014024	HNRNPU	100	96.030	Otolemur_garnettii
ENSMOCG00000015623	Hnrnpu	83	98.325	ENSOARG00000004985	HNRNPU	99	92.537	Ovis_aries
ENSMOCG00000015623	Hnrnpu	100	96.380	ENSPPAG00000038652	HNRNPU	99	98.684	Pan_paniscus
ENSMOCG00000015623	Hnrnpu	100	93.576	ENSPPRG00000002662	HNRNPU	99	98.308	Panthera_pardus
ENSMOCG00000015623	Hnrnpu	100	96.380	ENSPTRG00000002182	HNRNPU	99	98.684	Pan_troglodytes
ENSMOCG00000015623	Hnrnpu	100	96.255	ENSPANG00000011643	HNRNPU	99	98.496	Papio_anubis
ENSMOCG00000015623	Hnrnpu	79	83.721	ENSPKIG00000006885	hnrnpua	85	83.721	Paramormyrops_kingsleyae
ENSMOCG00000015623	Hnrnpu	84	66.933	ENSPKIG00000022332	hnrnpub	84	83.721	Paramormyrops_kingsleyae
ENSMOCG00000015623	Hnrnpu	100	90.095	ENSPCIG00000008657	HNRNPU	100	89.524	Phascolarctos_cinereus
ENSMOCG00000015623	Hnrnpu	64	65.079	ENSPFOG00000002908	hnrnpub	92	58.442	Poecilia_formosa
ENSMOCG00000015623	Hnrnpu	81	65.079	ENSPLAG00000004160	hnrnpub	92	58.442	Poecilia_latipinna
ENSMOCG00000015623	Hnrnpu	100	90.807	ENSPCOG00000003883	-	100	91.304	Propithecus_coquereli
ENSMOCG00000015623	Hnrnpu	100	94.521	ENSPCOG00000018655	-	99	98.684	Propithecus_coquereli
ENSMOCG00000015623	Hnrnpu	100	93.939	ENSPVAG00000002581	HNRNPU	100	93.712	Pteropus_vampyrus
ENSMOCG00000015623	Hnrnpu	79	78.723	ENSPNYG00000021642	hnrnpub	88	78.723	Pundamilia_nyererei
ENSMOCG00000015623	Hnrnpu	99	57.193	ENSPNAG00000001055	hnrnpub	81	63.287	Pygocentrus_nattereri
ENSMOCG00000015623	Hnrnpu	100	98.997	ENSRNOG00000033790	Hnrnpu	100	98.997	Rattus_norvegicus
ENSMOCG00000015623	Hnrnpu	100	95.381	ENSRBIG00000031519	HNRNPU	100	95.755	Rhinopithecus_bieti
ENSMOCG00000015623	Hnrnpu	100	96.030	ENSRROG00000041642	HNRNPU	100	96.030	Rhinopithecus_roxellana
ENSMOCG00000015623	Hnrnpu	99	57.260	ENSSFOG00015001124	hnrnpub	83	86.047	Scleropages_formosus
ENSMOCG00000015623	Hnrnpu	94	60.474	ENSSFOG00015019004	hnrnpu	98	59.311	Scleropages_formosus
ENSMOCG00000015623	Hnrnpu	75	70.175	ENSSMAG00000003607	hnrnpub	79	53.630	Scophthalmus_maximus
ENSMOCG00000015623	Hnrnpu	79	83.721	ENSSDUG00000005912	hnrnpub	81	55.556	Seriola_dumerili
ENSMOCG00000015623	Hnrnpu	79	83.721	ENSSLDG00000004899	hnrnpub	81	55.409	Seriola_lalandi_dorsalis
ENSMOCG00000015623	Hnrnpu	100	77.725	ENSSPUG00000011393	HNRNPU	100	79.187	Sphenodon_punctatus
ENSMOCG00000015623	Hnrnpu	77	61.279	ENSSPAG00000011853	hnrnpub	83	56.012	Stegastes_partitus
ENSMOCG00000015623	Hnrnpu	100	95.906	ENSSSCG00000010877	HNRNPU	100	95.906	Sus_scrofa
ENSMOCG00000015623	Hnrnpu	79	79.070	ENSTRUG00000007759	hnrnpub	86	79.070	Takifugu_rubripes
ENSMOCG00000015623	Hnrnpu	80	76.744	ENSTNIG00000009725	hnrnpub	92	76.744	Tetraodon_nigroviridis
ENSMOCG00000015623	Hnrnpu	70	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSMOCG00000015623	Hnrnpu	100	93.939	ENSUAMG00000021120	HNRNPU	99	98.684	Ursus_americanus
ENSMOCG00000015623	Hnrnpu	99	84.887	ENSUMAG00000012322	HNRNPU	97	94.662	Ursus_maritimus
ENSMOCG00000015623	Hnrnpu	80	92.481	ENSVPAG00000010520	HNRNPU	91	92.481	Vicugna_pacos
ENSMOCG00000015623	Hnrnpu	100	96.154	ENSVVUG00000026524	HNRNPU	100	96.154	Vulpes_vulpes
ENSMOCG00000015623	Hnrnpu	99	67.319	ENSXETG00000011386	hnrnpu	99	70.197	Xenopus_tropicalis
ENSMOCG00000015623	Hnrnpu	62	83.721	ENSXMAG00000010356	hnrnpub	91	57.143	Xiphophorus_maculatus