EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000015826 (Gene tree)
Gene ID: 101988583
Gene Symbol: Slbp
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 12750 bases
Position: chrJH996436.1:9027969-9040718
Accession: 101988583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000017124	SLBP_RNA_bind	PF15247.6	3.5e-29	1	1
ENSMOCP00000017130	SLBP_RNA_bind	PF15247.6	4.9e-29	1	1
ENSMOCP00000017127	SLBP_RNA_bind	PF15247.6	5.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000020916	-	765	-	ENSMOCP00000017130	255 (aa)	-	-
ENSMOCT00000020910	-	964	-	ENSMOCP00000017124	214 (aa)	-	-
ENSMOCT00000020913	-	825	XM_005372472	ENSMOCP00000017127	275 (aa)	XP_005372529	-

Gene Model

Click here to download ENSMOCG00000015826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000015826's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000015826	Slbp	99	89.573	ENSG00000163950	SLBP	100	85.091	Homo_sapiens
ENSMOCG00000015826	Slbp	86	58.291	ENSAPOG00000004953	slbp	90	50.584	Acanthochromis_polyacanthus
ENSMOCG00000015826	Slbp	79	93.548	ENSAMEG00000016915	SLBP	100	93.548	Ailuropoda_melanoleuca
ENSMOCG00000015826	Slbp	87	58.706	ENSACIG00000022308	slbp	94	51.429	Amphilophus_citrinellus
ENSMOCG00000015826	Slbp	86	56.784	ENSAOCG00000024545	slbp	74	55.714	Amphiprion_ocellaris
ENSMOCG00000015826	Slbp	86	56.784	ENSAPEG00000017629	slbp	90	48.638	Amphiprion_percula
ENSMOCG00000015826	Slbp	86	59.000	ENSATEG00000016358	slbp	92	49.237	Anabas_testudineus
ENSMOCG00000015826	Slbp	79	75.000	ENSAPLG00000015989	-	100	79.091	Anas_platyrhynchos
ENSMOCG00000015826	Slbp	99	86.697	ENSANAG00000034769	SLBP	100	82.979	Aotus_nancymaae
ENSMOCG00000015826	Slbp	86	57.868	ENSACLG00000007036	-	78	51.613	Astatotilapia_calliptera
ENSMOCG00000015826	Slbp	86	65.969	ENSAMXG00000014527	slbp	77	63.158	Astyanax_mexicanus
ENSMOCG00000015826	Slbp	99	85.782	ENSBTAG00000001328	SLBP	100	85.455	Bos_taurus
ENSMOCG00000015826	Slbp	99	85.780	ENSCJAG00000001790	SLBP	100	82.270	Callithrix_jacchus
ENSMOCG00000015826	Slbp	99	87.204	ENSCAFG00000015016	SLBP	100	86.545	Canis_familiaris
ENSMOCG00000015826	Slbp	99	87.204	ENSCAFG00020012334	SLBP	100	86.545	Canis_lupus_dingo
ENSMOCG00000015826	Slbp	99	85.308	ENSCHIG00000019364	SLBP	100	85.091	Capra_hircus
ENSMOCG00000015826	Slbp	99	89.573	ENSTSYG00000000376	SLBP	100	85.455	Carlito_syrichta
ENSMOCG00000015826	Slbp	65	88.398	ENSCAPG00000016340	SLBP	100	88.398	Cavia_aperea
ENSMOCG00000015826	Slbp	99	83.871	ENSCPOG00000000031	SLBP	100	83.871	Cavia_porcellus
ENSMOCG00000015826	Slbp	66	81.905	ENSCCAG00000026134	SLBP	85	80.000	Cebus_capucinus
ENSMOCG00000015826	Slbp	99	90.521	ENSCATG00000029173	SLBP	100	85.818	Cercocebus_atys
ENSMOCG00000015826	Slbp	99	84.834	ENSCLAG00000008157	SLBP	100	84.364	Chinchilla_lanigera
ENSMOCG00000015826	Slbp	99	72.500	ENSCSAG00000015628	SLBP	100	72.500	Chlorocebus_sabaeus
ENSMOCG00000015826	Slbp	99	69.858	ENSCPBG00000000746	SLBP	100	71.986	Chrysemys_picta_bellii
ENSMOCG00000015826	Slbp	78	88.889	ENSCANG00000041008	SLBP	100	87.963	Colobus_angolensis_palliatus
ENSMOCG00000015826	Slbp	99	93.818	ENSCGRG00001012991	-	100	93.818	Cricetulus_griseus_chok1gshd
ENSMOCG00000015826	Slbp	99	96.727	ENSCGRG00001009760	-	100	96.727	Cricetulus_griseus_chok1gshd
ENSMOCG00000015826	Slbp	99	96.727	ENSCGRG00000004506	Slbp	100	96.727	Cricetulus_griseus_crigri
ENSMOCG00000015826	Slbp	86	60.622	ENSCSEG00000020337	-	78	56.364	Cynoglossus_semilaevis
ENSMOCG00000015826	Slbp	90	57.143	ENSCVAG00000019592	-	81	54.545	Cyprinodon_variegatus
ENSMOCG00000015826	Slbp	92	61.881	ENSDARG00000100558	slbp	68	62.381	Danio_rerio
ENSMOCG00000015826	Slbp	99	80.822	ENSDNOG00000047539	SLBP	100	79.152	Dasypus_novemcinctus
ENSMOCG00000015826	Slbp	78	90.741	ENSDORG00000003028	Slbp	100	90.741	Dipodomys_ordii
ENSMOCG00000015826	Slbp	98	79.812	ENSETEG00000004641	SLBP	99	79.916	Echinops_telfairi
ENSMOCG00000015826	Slbp	69	91.146	ENSEASG00005022714	SLBP	100	91.146	Equus_asinus_asinus
ENSMOCG00000015826	Slbp	100	90.187	ENSECAG00000011689	SLBP	70	90.187	Equus_caballus
ENSMOCG00000015826	Slbp	88	57.711	ENSELUG00000012854	slbp	91	49.020	Esox_lucius
ENSMOCG00000015826	Slbp	99	87.678	ENSFCAG00000000169	SLBP	100	87.636	Felis_catus
ENSMOCG00000015826	Slbp	98	71.163	ENSFALG00000010003	-	100	69.039	Ficedula_albicollis
ENSMOCG00000015826	Slbp	92	88.538	ENSFDAG00000007592	SLBP	99	88.538	Fukomys_damarensis
ENSMOCG00000015826	Slbp	95	55.450	ENSFHEG00000007497	slbp	84	49.351	Fundulus_heteroclitus
ENSMOCG00000015826	Slbp	68	71.333	ENSGMOG00000015352	slbp	96	71.333	Gadus_morhua
ENSMOCG00000015826	Slbp	98	70.233	ENSGALG00000015712	SLBP	100	71.174	Gallus_gallus
ENSMOCG00000015826	Slbp	85	60.317	ENSGAFG00000019577	slbp	80	55.450	Gambusia_affinis
ENSMOCG00000015826	Slbp	86	57.143	ENSGACG00000019596	slbp	82	55.665	Gasterosteus_aculeatus
ENSMOCG00000015826	Slbp	98	68.981	ENSGAGG00000012096	SLBP	91	72.687	Gopherus_agassizii
ENSMOCG00000015826	Slbp	99	89.573	ENSGGOG00000003167	SLBP	100	85.091	Gorilla_gorilla
ENSMOCG00000015826	Slbp	86	57.000	ENSHBUG00000003338	-	78	51.613	Haplochromis_burtoni
ENSMOCG00000015826	Slbp	89	83.333	ENSHGLG00000008313	-	100	79.608	Heterocephalus_glaber_female
ENSMOCG00000015826	Slbp	99	74.909	ENSHGLG00000005955	-	100	75.355	Heterocephalus_glaber_female
ENSMOCG00000015826	Slbp	84	83.105	ENSHGLG00000010461	-	96	82.759	Heterocephalus_glaber_female
ENSMOCG00000015826	Slbp	99	87.204	ENSHGLG00100014018	-	100	87.143	Heterocephalus_glaber_male
ENSMOCG00000015826	Slbp	89	84.211	ENSHGLG00100010510	-	100	80.392	Heterocephalus_glaber_male
ENSMOCG00000015826	Slbp	84	83.105	ENSHGLG00100014906	-	96	82.759	Heterocephalus_glaber_male
ENSMOCG00000015826	Slbp	88	57.143	ENSHCOG00000013425	slbp	92	49.206	Hippocampus_comes
ENSMOCG00000015826	Slbp	86	67.368	ENSIPUG00000016780	slbp	74	67.172	Ictalurus_punctatus
ENSMOCG00000015826	Slbp	99	90.545	ENSSTOG00000003262	SLBP	100	90.545	Ictidomys_tridecemlineatus
ENSMOCG00000015826	Slbp	98	91.429	ENSJJAG00000002394	-	100	90.182	Jaculus_jaculus
ENSMOCG00000015826	Slbp	99	91.273	ENSJJAG00000020549	-	100	91.273	Jaculus_jaculus
ENSMOCG00000015826	Slbp	85	58.549	ENSKMAG00000008187	slbp	77	54.128	Kryptolebias_marmoratus
ENSMOCG00000015826	Slbp	85	60.104	ENSLBEG00000024709	slbp	91	47.826	Labrus_bergylta
ENSMOCG00000015826	Slbp	95	60.648	ENSLACG00000014623	SLBP	96	55.390	Latimeria_chalumnae
ENSMOCG00000015826	Slbp	88	58.706	ENSLOCG00000011027	slbp	90	52.416	Lepisosteus_oculatus
ENSMOCG00000015826	Slbp	98	84.259	ENSLAFG00000012933	SLBP	100	85.185	Loxodonta_africana
ENSMOCG00000015826	Slbp	87	91.444	ENSMFAG00000030130	SLBP	95	72.763	Macaca_fascicularis
ENSMOCG00000015826	Slbp	89	87.879	ENSMMUG00000032303	SLBP	96	88.479	Macaca_mulatta
ENSMOCG00000015826	Slbp	99	67.376	ENSMNEG00000008082	SLBP	100	66.667	Macaca_nemestrina
ENSMOCG00000015826	Slbp	92	79.216	ENSMLEG00000024639	SLBP	98	78.431	Mandrillus_leucophaeus
ENSMOCG00000015826	Slbp	86	54.726	ENSMAMG00000001046	-	90	47.656	Mastacembelus_armatus
ENSMOCG00000015826	Slbp	86	57.000	ENSMZEG00005017261	-	78	51.613	Maylandia_zebra
ENSMOCG00000015826	Slbp	78	78.802	ENSMGAG00000013085	SLBP	100	78.802	Meleagris_gallopavo
ENSMOCG00000015826	Slbp	99	96.727	ENSMAUG00000009490	Slbp	100	96.727	Mesocricetus_auratus
ENSMOCG00000015826	Slbp	99	89.573	ENSMICG00000014244	SLBP	100	84.364	Microcebus_murinus
ENSMOCG00000015826	Slbp	85	58.378	ENSMMOG00000010181	slbp	93	50.424	Mola_mola
ENSMOCG00000015826	Slbp	93	81.226	ENSMODG00000004304	SLBP	100	81.226	Monodelphis_domestica
ENSMOCG00000015826	Slbp	83	57.216	ENSMALG00000013883	-	54	55.502	Monopterus_albus
ENSMOCG00000015826	Slbp	100	95.794	MGP_CAROLIEiJ_G0027117	Slbp	100	94.909	Mus_caroli
ENSMOCG00000015826	Slbp	100	95.794	ENSMUSG00000004642	Slbp	100	95.273	Mus_musculus
ENSMOCG00000015826	Slbp	100	96.262	MGP_PahariEiJ_G0016901	Slbp	100	95.273	Mus_pahari
ENSMOCG00000015826	Slbp	100	96.262	MGP_SPRETEiJ_G0028113	Slbp	100	95.273	Mus_spretus
ENSMOCG00000015826	Slbp	67	90.761	ENSMPUG00000011139	SLBP	94	90.761	Mustela_putorius_furo
ENSMOCG00000015826	Slbp	79	87.156	ENSMLUG00000004425	SLBP	93	87.156	Myotis_lucifugus
ENSMOCG00000015826	Slbp	99	89.091	ENSNGAG00000020799	Slbp	100	89.091	Nannospalax_galili
ENSMOCG00000015826	Slbp	91	56.459	ENSNBRG00000006044	-	87	52.609	Neolamprologus_brichardi
ENSMOCG00000015826	Slbp	99	86.697	ENSNLEG00000000048	SLBP	100	82.979	Nomascus_leucogenys
ENSMOCG00000015826	Slbp	71	89.404	ENSMEUG00000002501	SLBP	100	88.202	Notamacropus_eugenii
ENSMOCG00000015826	Slbp	99	85.308	ENSODEG00000012641	SLBP	100	84.000	Octodon_degus
ENSMOCG00000015826	Slbp	86	58.000	ENSONIG00000017469	-	78	52.074	Oreochromis_niloticus
ENSMOCG00000015826	Slbp	79	84.793	ENSOANG00000014243	SLBP	95	84.793	Ornithorhynchus_anatinus
ENSMOCG00000015826	Slbp	85	59.788	ENSORLG00000024887	-	74	54.040	Oryzias_latipes
ENSMOCG00000015826	Slbp	85	59.259	ENSORLG00020007798	slbp	73	53.535	Oryzias_latipes_hni
ENSMOCG00000015826	Slbp	85	60.317	ENSORLG00015016656	slbp	73	54.545	Oryzias_latipes_hsok
ENSMOCG00000015826	Slbp	89	57.789	ENSOMEG00000010818	slbp	72	57.143	Oryzias_melastigma
ENSMOCG00000015826	Slbp	99	89.100	ENSOGAG00000009750	SLBP	100	84.364	Otolemur_garnettii
ENSMOCG00000015826	Slbp	79	90.783	ENSOARG00000016090	SLBP	100	90.783	Ovis_aries
ENSMOCG00000015826	Slbp	99	89.573	ENSPPAG00000033300	SLBP	100	85.091	Pan_paniscus
ENSMOCG00000015826	Slbp	91	88.400	ENSPPRG00000016897	SLBP	100	88.400	Panthera_pardus
ENSMOCG00000015826	Slbp	69	91.667	ENSPTIG00000015057	SLBP	100	91.667	Panthera_tigris_altaica
ENSMOCG00000015826	Slbp	99	89.100	ENSPTRG00000015832	SLBP	100	84.727	Pan_troglodytes
ENSMOCG00000015826	Slbp	99	85.455	ENSPANG00000004932	SLBP	100	82.042	Papio_anubis
ENSMOCG00000015826	Slbp	88	60.513	ENSPKIG00000006183	slbp	75	58.140	Paramormyrops_kingsleyae
ENSMOCG00000015826	Slbp	87	56.311	ENSPMGG00000017684	-	95	56.771	Periophthalmus_magnuspinnatus
ENSMOCG00000015826	Slbp	99	97.091	ENSPEMG00000018369	Slbp	100	97.091	Peromyscus_maniculatus_bairdii
ENSMOCG00000015826	Slbp	99	74.915	ENSPCIG00000013575	SLBP	86	74.747	Phascolarctos_cinereus
ENSMOCG00000015826	Slbp	85	59.788	ENSPFOG00000000462	slbp	76	55.450	Poecilia_formosa
ENSMOCG00000015826	Slbp	85	59.788	ENSPLAG00000008300	slbp	81	53.271	Poecilia_latipinna
ENSMOCG00000015826	Slbp	85	59.788	ENSPMEG00000020807	slbp	76	55.450	Poecilia_mexicana
ENSMOCG00000015826	Slbp	85	59.788	ENSPREG00000004561	slbp	76	55.450	Poecilia_reticulata
ENSMOCG00000015826	Slbp	98	90.000	ENSPPYG00000014529	SLBP	100	85.455	Pongo_abelii
ENSMOCG00000015826	Slbp	99	89.573	ENSPCOG00000017399	SLBP	100	85.091	Propithecus_coquereli
ENSMOCG00000015826	Slbp	99	80.569	ENSPVAG00000002807	SLBP	100	80.364	Pteropus_vampyrus
ENSMOCG00000015826	Slbp	86	57.000	ENSPNYG00000005451	-	78	51.613	Pundamilia_nyererei
ENSMOCG00000015826	Slbp	88	66.154	ENSPNAG00000018503	slbp	89	58.750	Pygocentrus_nattereri
ENSMOCG00000015826	Slbp	99	95.636	ENSRNOG00000037162	Slbp	100	95.636	Rattus_norvegicus
ENSMOCG00000015826	Slbp	99	90.521	ENSRBIG00000039159	SLBP	100	85.818	Rhinopithecus_bieti
ENSMOCG00000015826	Slbp	92	89.848	ENSRROG00000030081	SLBP	96	85.057	Rhinopithecus_roxellana
ENSMOCG00000015826	Slbp	69	87.500	ENSSBOG00000033897	SLBP	100	86.458	Saimiri_boliviensis_boliviensis
ENSMOCG00000015826	Slbp	99	74.582	ENSSHAG00000013939	SLBP	100	74.582	Sarcophilus_harrisii
ENSMOCG00000015826	Slbp	94	61.033	ENSSFOG00015019429	slbp	82	58.222	Scleropages_formosus
ENSMOCG00000015826	Slbp	88	54.028	ENSSMAG00000016028	-	82	50.638	Scophthalmus_maximus
ENSMOCG00000015826	Slbp	86	58.462	ENSSDUG00000000855	-	77	55.399	Seriola_dumerili
ENSMOCG00000015826	Slbp	86	41.361	ENSSLDG00000007554	-	66	42.188	Seriola_lalandi_dorsalis
ENSMOCG00000015826	Slbp	64	53.020	ENSSLDG00000022893	-	86	54.110	Seriola_lalandi_dorsalis
ENSMOCG00000015826	Slbp	91	73.333	ENSSPUG00000016007	SLBP	98	68.077	Sphenodon_punctatus
ENSMOCG00000015826	Slbp	86	59.799	ENSSPAG00000004021	slbp	82	57.674	Stegastes_partitus
ENSMOCG00000015826	Slbp	99	85.308	ENSSSCG00000008676	SLBP	100	84.000	Sus_scrofa
ENSMOCG00000015826	Slbp	93	69.349	ENSTGUG00000010626	-	100	71.264	Taeniopygia_guttata
ENSMOCG00000015826	Slbp	85	60.733	ENSTRUG00000000688	slbp	75	54.808	Takifugu_rubripes
ENSMOCG00000015826	Slbp	85	56.915	ENSTNIG00000000484	-	80	50.732	Tetraodon_nigroviridis
ENSMOCG00000015826	Slbp	68	91.176	ENSTBEG00000004085	SLBP	100	66.535	Tupaia_belangeri
ENSMOCG00000015826	Slbp	78	92.130	ENSTTRG00000010901	-	100	92.130	Tursiops_truncatus
ENSMOCG00000015826	Slbp	71	88.742	ENSTTRG00000004010	-	100	88.202	Tursiops_truncatus
ENSMOCG00000015826	Slbp	99	87.793	ENSUAMG00000012990	SLBP	100	87.365	Ursus_americanus
ENSMOCG00000015826	Slbp	69	91.667	ENSUMAG00000006119	SLBP	100	91.667	Ursus_maritimus
ENSMOCG00000015826	Slbp	99	86.256	ENSVVUG00000015578	-	100	85.818	Vulpes_vulpes
ENSMOCG00000015826	Slbp	91	60.500	ENSXETG00000003876	slbp	93	57.937	Xenopus_tropicalis
ENSMOCG00000015826	Slbp	85	59.686	ENSXCOG00000008275	slbp	81	55.399	Xiphophorus_couchianus
ENSMOCG00000015826	Slbp	85	59.788	ENSXMAG00000001331	-	75	55.450	Xiphophorus_maculatus