EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000015895 (Gene tree)
Gene ID: 102002555
Gene Symbol: Trmt1
Alias: 6720406L13Rik|D8Ertd812e
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 11455 bases
Position: chrJH996520.1:1352762-1364216
Accession: 102002555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000017249	zf-CCCH	PF00642.24	6.9e-07	1	1
ENSMOCP00000017249	TRM	PF02005.16	9.9e-149	1	1
ENSMOCP00000017249	Met_10	PF02475.16	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000021037	-	2051	XM_013355074	ENSMOCP00000017249	660 (aa)	XP_013210528	UPI00067AD415

Gene Model

Click here to download ENSMOCG00000015895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000015895's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000015895	Trmt1	96	84.555	ENSG00000104907	TRMT1	100	92.147	Homo_sapiens
ENSMOCG00000015895	Trmt1	100	81.109	ENSAMEG00000012598	TRMT1	97	81.902	Ailuropoda_melanoleuca
ENSMOCG00000015895	Trmt1	90	56.656	ENSACIG00000018680	trmt1	95	56.494	Amphilophus_citrinellus
ENSMOCG00000015895	Trmt1	87	65.565	ENSAOCG00000006781	trmt1	86	65.391	Amphiprion_ocellaris
ENSMOCG00000015895	Trmt1	87	65.565	ENSAPEG00000007712	trmt1	86	65.451	Amphiprion_percula
ENSMOCG00000015895	Trmt1	87	67.308	ENSATEG00000001872	trmt1	84	67.365	Anabas_testudineus
ENSMOCG00000015895	Trmt1	91	66.000	ENSACAG00000003825	TRMT1	96	65.667	Anolis_carolinensis
ENSMOCG00000015895	Trmt1	97	80.526	ENSANAG00000023016	TRMT1	98	84.288	Aotus_nancymaae
ENSMOCG00000015895	Trmt1	87	63.918	ENSACLG00000010073	trmt1	94	63.746	Astatotilapia_calliptera
ENSMOCG00000015895	Trmt1	88	65.812	ENSAMXG00000012026	trmt1	87	65.470	Astyanax_mexicanus
ENSMOCG00000015895	Trmt1	99	82.219	ENSBTAG00000019325	TRMT1	92	82.870	Bos_taurus
ENSMOCG00000015895	Trmt1	78	41.021	WBGene00006613	trm-1	94	41.021	Caenorhabditis_elegans
ENSMOCG00000015895	Trmt1	96	79.658	ENSCJAG00000004566	TRMT1	98	79.658	Callithrix_jacchus
ENSMOCG00000015895	Trmt1	100	82.132	ENSCAFG00000017070	TRMT1	97	85.203	Canis_familiaris
ENSMOCG00000015895	Trmt1	98	81.804	ENSCAFG00020005397	TRMT1	97	79.845	Canis_lupus_dingo
ENSMOCG00000015895	Trmt1	100	81.409	ENSCHIG00000013569	TRMT1	98	82.743	Capra_hircus
ENSMOCG00000015895	Trmt1	96	77.691	ENSTSYG00000003207	TRMT1	98	77.484	Carlito_syrichta
ENSMOCG00000015895	Trmt1	83	78.947	ENSCAPG00000003355	TRMT1	97	78.947	Cavia_aperea
ENSMOCG00000015895	Trmt1	97	80.310	ENSCPOG00000011754	TRMT1	97	80.310	Cavia_porcellus
ENSMOCG00000015895	Trmt1	98	78.560	ENSCCAG00000022263	TRMT1	98	82.951	Cebus_capucinus
ENSMOCG00000015895	Trmt1	100	83.784	ENSCATG00000039850	TRMT1	98	85.185	Cercocebus_atys
ENSMOCG00000015895	Trmt1	83	71.036	ENSCATG00000038220	-	95	71.036	Cercocebus_atys
ENSMOCG00000015895	Trmt1	95	83.281	ENSCLAG00000015295	TRMT1	97	80.284	Chinchilla_lanigera
ENSMOCG00000015895	Trmt1	80	85.849	ENSCSAG00000006500	TRMT1	100	85.849	Chlorocebus_sabaeus
ENSMOCG00000015895	Trmt1	93	65.931	ENSCPBG00000023866	TRMT1	94	66.562	Chrysemys_picta_bellii
ENSMOCG00000015895	Trmt1	83	46.071	ENSCING00000002884	-	98	46.071	Ciona_intestinalis
ENSMOCG00000015895	Trmt1	83	45.668	ENSCSAVG00000010927	-	99	45.073	Ciona_savignyi
ENSMOCG00000015895	Trmt1	94	65.756	ENSCANG00000031650	-	95	65.756	Colobus_angolensis_palliatus
ENSMOCG00000015895	Trmt1	98	67.890	ENSCANG00000040631	TRMT1	97	68.711	Colobus_angolensis_palliatus
ENSMOCG00000015895	Trmt1	100	90.977	ENSCGRG00001022594	Trmt1	98	91.538	Cricetulus_griseus_chok1gshd
ENSMOCG00000015895	Trmt1	100	90.977	ENSCGRG00000017732	Trmt1	98	91.538	Cricetulus_griseus_crigri
ENSMOCG00000015895	Trmt1	86	65.674	ENSCSEG00000001643	trmt1	84	67.121	Cynoglossus_semilaevis
ENSMOCG00000015895	Trmt1	86	66.667	ENSCVAG00000011886	trmt1	85	66.667	Cyprinodon_variegatus
ENSMOCG00000015895	Trmt1	86	64.828	ENSDARG00000010978	trmt1	85	64.767	Danio_rerio
ENSMOCG00000015895	Trmt1	85	57.979	ENSDNOG00000048240	-	93	58.364	Dasypus_novemcinctus
ENSMOCG00000015895	Trmt1	99	79.607	ENSDORG00000014298	Trmt1	98	80.590	Dipodomys_ordii
ENSMOCG00000015895	Trmt1	82	47.628	FBgn0032430	CG6388	92	47.628	Drosophila_melanogaster
ENSMOCG00000015895	Trmt1	54	75.862	ENSETEG00000015483	-	53	75.862	Echinops_telfairi
ENSMOCG00000015895	Trmt1	78	52.611	ENSEBUG00000003449	trmt1	75	52.399	Eptatretus_burgeri
ENSMOCG00000015895	Trmt1	93	83.089	ENSEASG00005004050	TRMT1	97	82.448	Equus_asinus_asinus
ENSMOCG00000015895	Trmt1	93	83.415	ENSECAG00000016149	TRMT1	97	82.770	Equus_caballus
ENSMOCG00000015895	Trmt1	60	70.960	ENSEEUG00000014102	-	100	70.960	Erinaceus_europaeus
ENSMOCG00000015895	Trmt1	89	62.748	ENSELUG00000021659	trmt1	89	62.417	Esox_lucius
ENSMOCG00000015895	Trmt1	99	82.326	ENSFCAG00000000483	TRMT1	98	82.998	Felis_catus
ENSMOCG00000015895	Trmt1	99	78.861	ENSFDAG00000007386	TRMT1	97	80.341	Fukomys_damarensis
ENSMOCG00000015895	Trmt1	85	65.775	ENSFHEG00000012865	trmt1	89	67.161	Fundulus_heteroclitus
ENSMOCG00000015895	Trmt1	87	60.035	ENSGMOG00000006564	trmt1	98	60.558	Gadus_morhua
ENSMOCG00000015895	Trmt1	87	66.495	ENSGAFG00000011862	trmt1	90	66.495	Gambusia_affinis
ENSMOCG00000015895	Trmt1	90	61.603	ENSGACG00000000227	trmt1	95	62.000	Gasterosteus_aculeatus
ENSMOCG00000015895	Trmt1	94	65.679	ENSGAGG00000016432	TRMT1	94	65.679	Gopherus_agassizii
ENSMOCG00000015895	Trmt1	96	84.711	ENSGGOG00000014007	TRMT1	98	84.472	Gorilla_gorilla
ENSMOCG00000015895	Trmt1	86	57.774	ENSHBUG00000008821	trmt1	93	57.067	Haplochromis_burtoni
ENSMOCG00000015895	Trmt1	98	81.902	ENSHGLG00000015972	TRMT1	99	81.874	Heterocephalus_glaber_female
ENSMOCG00000015895	Trmt1	98	76.840	ENSHGLG00100018112	TRMT1	99	76.805	Heterocephalus_glaber_male
ENSMOCG00000015895	Trmt1	87	63.112	ENSHCOG00000009447	trmt1	88	63.112	Hippocampus_comes
ENSMOCG00000015895	Trmt1	92	59.934	ENSIPUG00000002899	trmt1	85	65.009	Ictalurus_punctatus
ENSMOCG00000015895	Trmt1	100	82.934	ENSSTOG00000012531	TRMT1	97	84.472	Ictidomys_tridecemlineatus
ENSMOCG00000015895	Trmt1	94	83.067	ENSJJAG00000017154	Trmt1	98	81.231	Jaculus_jaculus
ENSMOCG00000015895	Trmt1	89	64.407	ENSKMAG00000011809	trmt1	98	63.729	Kryptolebias_marmoratus
ENSMOCG00000015895	Trmt1	86	65.789	ENSLBEG00000012703	trmt1	84	65.849	Labrus_bergylta
ENSMOCG00000015895	Trmt1	86	57.812	ENSLACG00000014585	TRMT1	93	57.812	Latimeria_chalumnae
ENSMOCG00000015895	Trmt1	86	60.825	ENSLOCG00000006479	trmt1	97	61.938	Lepisosteus_oculatus
ENSMOCG00000015895	Trmt1	97	81.818	ENSLAFG00000014072	TRMT1	99	81.790	Loxodonta_africana
ENSMOCG00000015895	Trmt1	100	83.784	ENSMFAG00000033143	TRMT1	98	85.185	Macaca_fascicularis
ENSMOCG00000015895	Trmt1	99	77.005	ENSMMUG00000001167	TRMT1	98	78.227	Macaca_mulatta
ENSMOCG00000015895	Trmt1	100	83.784	ENSMNEG00000037867	TRMT1	98	85.185	Macaca_nemestrina
ENSMOCG00000015895	Trmt1	99	83.460	ENSMLEG00000016142	TRMT1	97	84.867	Mandrillus_leucophaeus
ENSMOCG00000015895	Trmt1	89	65.825	ENSMAMG00000004357	trmt1	88	65.825	Mastacembelus_armatus
ENSMOCG00000015895	Trmt1	90	62.338	ENSMZEG00005014510	trmt1	92	62.175	Maylandia_zebra
ENSMOCG00000015895	Trmt1	97	91.318	ENSMAUG00000011134	Trmt1	97	91.318	Mesocricetus_auratus
ENSMOCG00000015895	Trmt1	100	82.883	ENSMICG00000000793	TRMT1	98	83.796	Microcebus_murinus
ENSMOCG00000015895	Trmt1	86	65.263	ENSMMOG00000011097	trmt1	92	64.912	Mola_mola
ENSMOCG00000015895	Trmt1	90	76.040	ENSMODG00000011619	TRMT1	97	76.040	Monodelphis_domestica
ENSMOCG00000015895	Trmt1	100	88.571	MGP_CAROLIEiJ_G0031304	Trmt1	98	89.077	Mus_caroli
ENSMOCG00000015895	Trmt1	100	88.571	ENSMUSG00000001909	Trmt1	98	88.769	Mus_musculus
ENSMOCG00000015895	Trmt1	100	88.120	MGP_SPRETEiJ_G0032422	Trmt1	98	87.692	Mus_spretus
ENSMOCG00000015895	Trmt1	100	81.982	ENSMPUG00000004210	TRMT1	92	83.256	Mustela_putorius_furo
ENSMOCG00000015895	Trmt1	100	81.982	ENSMLUG00000012809	TRMT1	97	82.642	Myotis_lucifugus
ENSMOCG00000015895	Trmt1	99	82.853	ENSNGAG00000022486	Trmt1	98	83.002	Nannospalax_galili
ENSMOCG00000015895	Trmt1	75	69.069	ENSNBRG00000024376	trmt1	85	69.069	Neolamprologus_brichardi
ENSMOCG00000015895	Trmt1	78	83.425	ENSNLEG00000013019	-	97	82.609	Nomascus_leucogenys
ENSMOCG00000015895	Trmt1	90	75.671	ENSMEUG00000013756	TRMT1	100	75.671	Notamacropus_eugenii
ENSMOCG00000015895	Trmt1	76	87.136	ENSOPRG00000009471	-	78	87.136	Ochotona_princeps
ENSMOCG00000015895	Trmt1	98	80.551	ENSODEG00000010323	TRMT1	99	80.615	Octodon_degus
ENSMOCG00000015895	Trmt1	93	62.578	ENSONIG00000000400	trmt1	96	65.124	Oreochromis_niloticus
ENSMOCG00000015895	Trmt1	79	84.160	ENSOCUG00000021934	TRMT1	99	84.160	Oryctolagus_cuniculus
ENSMOCG00000015895	Trmt1	86	62.069	ENSORLG00000020074	trmt1	90	62.069	Oryzias_latipes
ENSMOCG00000015895	Trmt1	86	65.263	ENSORLG00020007561	trmt1	89	65.088	Oryzias_latipes_hni
ENSMOCG00000015895	Trmt1	86	65.614	ENSORLG00015006547	trmt1	86	65.614	Oryzias_latipes_hsok
ENSMOCG00000015895	Trmt1	86	65.674	ENSOMEG00000019343	trmt1	86	65.674	Oryzias_melastigma
ENSMOCG00000015895	Trmt1	94	82.006	ENSOGAG00000025576	TRMT1	98	82.006	Otolemur_garnettii
ENSMOCG00000015895	Trmt1	100	66.418	ENSOARG00000009397	TRMT1	92	67.791	Ovis_aries
ENSMOCG00000015895	Trmt1	98	74.732	ENSPPRG00000012117	TRMT1	98	75.392	Panthera_pardus
ENSMOCG00000015895	Trmt1	76	83.537	ENSPTIG00000008833	TRMT1	95	83.537	Panthera_tigris_altaica
ENSMOCG00000015895	Trmt1	95	65.087	ENSPTRG00000050421	-	93	65.635	Pan_troglodytes
ENSMOCG00000015895	Trmt1	96	84.555	ENSPTRG00000010557	TRMT1	98	84.317	Pan_troglodytes
ENSMOCG00000015895	Trmt1	85	70.600	ENSPANG00000034058	-	94	70.600	Papio_anubis
ENSMOCG00000015895	Trmt1	99	83.788	ENSPANG00000009247	TRMT1	97	85.202	Papio_anubis
ENSMOCG00000015895	Trmt1	87	66.958	ENSPKIG00000005309	trmt1	84	66.725	Paramormyrops_kingsleyae
ENSMOCG00000015895	Trmt1	84	60.753	ENSPSIG00000008762	TRMT1	90	56.735	Pelodiscus_sinensis
ENSMOCG00000015895	Trmt1	87	64.747	ENSPMGG00000019764	trmt1	90	64.572	Periophthalmus_magnuspinnatus
ENSMOCG00000015895	Trmt1	98	93.077	ENSPEMG00000016247	Trmt1	98	93.077	Peromyscus_maniculatus_bairdii
ENSMOCG00000015895	Trmt1	88	59.114	ENSPMAG00000004329	trmt1	91	59.758	Petromyzon_marinus
ENSMOCG00000015895	Trmt1	94	73.386	ENSPCIG00000019273	TRMT1	98	73.386	Phascolarctos_cinereus
ENSMOCG00000015895	Trmt1	87	68.041	ENSPFOG00000008527	trmt1	89	67.698	Poecilia_formosa
ENSMOCG00000015895	Trmt1	87	67.642	ENSPLAG00000018788	trmt1	92	67.587	Poecilia_latipinna
ENSMOCG00000015895	Trmt1	87	67.869	ENSPMEG00000013120	trmt1	89	67.526	Poecilia_mexicana
ENSMOCG00000015895	Trmt1	86	67.250	ENSPREG00000000211	trmt1	86	66.724	Poecilia_reticulata
ENSMOCG00000015895	Trmt1	96	84.555	ENSPPYG00000009622	TRMT1	98	84.317	Pongo_abelii
ENSMOCG00000015895	Trmt1	97	74.730	ENSPCAG00000003698	TRMT1	99	75.000	Procavia_capensis
ENSMOCG00000015895	Trmt1	99	82.979	ENSPCOG00000008653	TRMT1	97	84.219	Propithecus_coquereli
ENSMOCG00000015895	Trmt1	99	81.942	ENSPVAG00000015076	TRMT1	97	82.683	Pteropus_vampyrus
ENSMOCG00000015895	Trmt1	87	62.371	ENSPNYG00000013960	trmt1	94	62.199	Pundamilia_nyererei
ENSMOCG00000015895	Trmt1	82	67.432	ENSPNAG00000024859	trmt1	90	67.432	Pygocentrus_nattereri
ENSMOCG00000015895	Trmt1	96	89.219	ENSRNOG00000002914	Trmt1	98	89.760	Rattus_norvegicus
ENSMOCG00000015895	Trmt1	94	66.667	ENSRBIG00000037505	-	97	66.401	Rhinopithecus_bieti
ENSMOCG00000015895	Trmt1	100	82.733	ENSRBIG00000038324	TRMT1	98	84.105	Rhinopithecus_bieti
ENSMOCG00000015895	Trmt1	100	82.883	ENSRROG00000028599	TRMT1	98	84.259	Rhinopithecus_roxellana
ENSMOCG00000015895	Trmt1	94	65.865	ENSRROG00000031847	-	96	65.605	Rhinopithecus_roxellana
ENSMOCG00000015895	Trmt1	78	37.017	YDR120C	-	92	37.017	Saccharomyces_cerevisiae
ENSMOCG00000015895	Trmt1	98	78.963	ENSSBOG00000028861	TRMT1	98	82.951	Saimiri_boliviensis_boliviensis
ENSMOCG00000015895	Trmt1	88	76.451	ENSSHAG00000014381	TRMT1	97	75.707	Sarcophilus_harrisii
ENSMOCG00000015895	Trmt1	87	66.900	ENSSFOG00015004139	trmt1	84	66.900	Scleropages_formosus
ENSMOCG00000015895	Trmt1	86	66.202	ENSSMAG00000021136	trmt1	90	62.276	Scophthalmus_maximus
ENSMOCG00000015895	Trmt1	86	66.200	ENSSDUG00000012740	trmt1	84	66.200	Seriola_dumerili
ENSMOCG00000015895	Trmt1	86	66.025	ENSSLDG00000005971	trmt1	84	66.025	Seriola_lalandi_dorsalis
ENSMOCG00000015895	Trmt1	85	81.514	ENSSARG00000005138	TRMT1	100	81.162	Sorex_araneus
ENSMOCG00000015895	Trmt1	86	55.497	ENSSPUG00000001084	TRMT1	89	54.974	Sphenodon_punctatus
ENSMOCG00000015895	Trmt1	90	62.752	ENSSPAG00000007153	trmt1	98	62.814	Stegastes_partitus
ENSMOCG00000015895	Trmt1	95	84.579	ENSSSCG00000013744	TRMT1	97	85.137	Sus_scrofa
ENSMOCG00000015895	Trmt1	89	61.176	ENSTRUG00000010700	trmt1	89	60.672	Takifugu_rubripes
ENSMOCG00000015895	Trmt1	86	64.685	ENSTNIG00000018808	trmt1	98	64.510	Tetraodon_nigroviridis
ENSMOCG00000015895	Trmt1	98	80.308	ENSTTRG00000006379	TRMT1	97	81.094	Tursiops_truncatus
ENSMOCG00000015895	Trmt1	99	82.040	ENSUAMG00000022911	TRMT1	98	82.710	Ursus_americanus
ENSMOCG00000015895	Trmt1	96	83.333	ENSUMAG00000006027	TRMT1	97	84.058	Ursus_maritimus
ENSMOCG00000015895	Trmt1	100	81.982	ENSVVUG00000024177	TRMT1	97	83.256	Vulpes_vulpes
ENSMOCG00000015895	Trmt1	72	68.987	ENSXETG00000033863	TRMT1	94	68.987	Xenopus_tropicalis
ENSMOCG00000015895	Trmt1	86	67.426	ENSXCOG00000015733	trmt1	88	67.426	Xiphophorus_couchianus
ENSMOCG00000015895	Trmt1	86	67.426	ENSXMAG00000013823	trmt1	97	67.075	Xiphophorus_maculatus