EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000016170 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 14045 bases
Position: chrJH996431.1:36507604-36521648
Accession: 102002043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000017628	APOBEC_N	PF08210.11	8.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000021418	-	945	XM_005365168	ENSMOCP00000017628	113 (aa)	XP_005365225	-

Gene Model

Click here to download ENSMOCG00000016170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000016170's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000016170	-	85	48.515	ENSACAG00000028578	-	53	48.515	Anolis_carolinensis
ENSMOCG00000016170	-	94	69.811	ENSTSYG00000029141	APOBEC1	75	69.811	Carlito_syrichta
ENSMOCG00000016170	-	82	57.534	ENSGAGG00000011837	-	50	57.534	Gopherus_agassizii
ENSMOCG00000016170	-	86	51.020	ENSGAGG00000004947	-	63	51.020	Gopherus_agassizii
ENSMOCG00000016170	-	86	75.258	ENSSTOG00000021971	APOBEC1	99	75.258	Ictidomys_tridecemlineatus
ENSMOCG00000016170	-	100	82.301	ENSMUSG00000040613	Apobec1	100	82.301	Mus_musculus
ENSMOCG00000016170	-	100	82.301	MGP_PahariEiJ_G0022580	-	100	82.301	Mus_pahari
ENSMOCG00000016170	-	100	82.301	MGP_SPRETEiJ_G0029857	Apobec1	100	82.301	Mus_spretus
ENSMOCG00000016170	-	94	62.264	ENSOPRG00000009508	-	59	62.264	Ochotona_princeps
ENSMOCG00000016170	-	86	62.887	ENSODEG00000001157	-	99	62.887	Octodon_degus
ENSMOCG00000016170	-	99	70.536	ENSPCAG00000008733	APOBEC1	60	70.536	Procavia_capensis
ENSMOCG00000016170	-	87	70.408	ENSSBOG00000030587	APOBEC1	55	70.408	Saimiri_boliviensis_boliviensis
ENSMOCG00000016170	-	86	70.103	ENSSARG00000011972	-	73	70.103	Sorex_araneus
ENSMOCG00000016170	-	86	68.041	ENSSARG00000000032	-	56	68.041	Sorex_araneus
ENSMOCG00000016170	-	87	48.485	ENSTGUG00000013118	-	67	48.485	Taeniopygia_guttata
ENSMOCG00000016170	-	100	67.257	ENSTTRG00000014015	APOBEC1	60	67.257	Tursiops_truncatus