EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000016205 (Gene tree)
Gene ID: 101994068
Gene Symbol: Edc3
Alias: Lsm16|Yjdc
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 41104 bases
Position: chrJH996479.1:579980-621083
Accession: 101994068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000017692	FDF	PF09532.10	2.6e-17	1	1
ENSMOCP00000017692	LSM14	PF12701.7	1.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000021482	-	3409	XM_005369459	ENSMOCP00000017692	508 (aa)	XP_005369516	UPI00038BCD0F

Gene Model

Click here to download ENSMOCG00000016205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000016205's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000016205	Edc3	100	96.654	ENSG00000179151	EDC3	100	96.933	Homo_sapiens
ENSMOCG00000016205	Edc3	100	55.340	ENSAPOG00000008655	EDC3	100	55.340	Acanthochromis_polyacanthus
ENSMOCG00000016205	Edc3	100	69.412	ENSAPOG00000010791	edc3	100	69.412	Acanthochromis_polyacanthus
ENSMOCG00000016205	Edc3	100	95.866	ENSAMEG00000008963	EDC3	100	95.866	Ailuropoda_melanoleuca
ENSMOCG00000016205	Edc3	100	68.369	ENSACIG00000017751	edc3	100	68.369	Amphilophus_citrinellus
ENSMOCG00000016205	Edc3	99	58.869	ENSACIG00000005330	EDC3	99	58.869	Amphilophus_citrinellus
ENSMOCG00000016205	Edc3	100	69.608	ENSAOCG00000005431	edc3	100	69.608	Amphiprion_ocellaris
ENSMOCG00000016205	Edc3	100	57.752	ENSAOCG00000009103	-	100	57.752	Amphiprion_ocellaris
ENSMOCG00000016205	Edc3	100	57.752	ENSAPEG00000007841	EDC3	100	57.752	Amphiprion_percula
ENSMOCG00000016205	Edc3	100	69.608	ENSAPEG00000000968	edc3	100	69.608	Amphiprion_percula
ENSMOCG00000016205	Edc3	100	57.308	ENSATEG00000004205	-	100	57.308	Anabas_testudineus
ENSMOCG00000016205	Edc3	100	69.941	ENSATEG00000015505	edc3	100	69.941	Anabas_testudineus
ENSMOCG00000016205	Edc3	90	87.473	ENSAPLG00000008957	EDC3	100	87.473	Anas_platyrhynchos
ENSMOCG00000016205	Edc3	78	87.406	ENSACAG00000000460	-	100	87.406	Anolis_carolinensis
ENSMOCG00000016205	Edc3	100	96.654	ENSANAG00000024078	EDC3	100	96.654	Aotus_nancymaae
ENSMOCG00000016205	Edc3	99	58.008	ENSACLG00000018776	-	99	58.008	Astatotilapia_calliptera
ENSMOCG00000016205	Edc3	100	67.780	ENSACLG00000007232	edc3	100	67.780	Astatotilapia_calliptera
ENSMOCG00000016205	Edc3	100	70.703	ENSAMXG00000001589	edc3	100	70.703	Astyanax_mexicanus
ENSMOCG00000016205	Edc3	100	95.866	ENSBTAG00000007308	EDC3	100	95.866	Bos_taurus
ENSMOCG00000016205	Edc3	100	96.850	ENSCJAG00000017681	EDC3	100	96.850	Callithrix_jacchus
ENSMOCG00000016205	Edc3	100	95.866	ENSCAFG00000017935	EDC3	100	95.866	Canis_familiaris
ENSMOCG00000016205	Edc3	100	95.866	ENSCAFG00020003909	EDC3	100	95.866	Canis_lupus_dingo
ENSMOCG00000016205	Edc3	100	96.260	ENSCHIG00000023658	EDC3	100	96.260	Capra_hircus
ENSMOCG00000016205	Edc3	100	96.260	ENSTSYG00000004822	EDC3	100	96.260	Carlito_syrichta
ENSMOCG00000016205	Edc3	100	95.669	ENSCPOG00000015595	EDC3	100	95.669	Cavia_porcellus
ENSMOCG00000016205	Edc3	100	97.047	ENSCCAG00000021663	EDC3	100	97.047	Cebus_capucinus
ENSMOCG00000016205	Edc3	100	97.441	ENSCATG00000037511	EDC3	100	97.441	Cercocebus_atys
ENSMOCG00000016205	Edc3	100	95.276	ENSCLAG00000005700	EDC3	100	95.276	Chinchilla_lanigera
ENSMOCG00000016205	Edc3	100	97.441	ENSCSAG00000014239	EDC3	100	97.441	Chlorocebus_sabaeus
ENSMOCG00000016205	Edc3	100	88.976	ENSCPBG00000024239	EDC3	100	88.976	Chrysemys_picta_bellii
ENSMOCG00000016205	Edc3	100	38.077	ENSCING00000022142	-	99	38.077	Ciona_intestinalis
ENSMOCG00000016205	Edc3	100	97.441	ENSCANG00000028699	EDC3	100	97.441	Colobus_angolensis_palliatus
ENSMOCG00000016205	Edc3	100	99.016	ENSCGRG00001013874	Edc3	100	99.016	Cricetulus_griseus_chok1gshd
ENSMOCG00000016205	Edc3	100	99.016	ENSCGRG00000011885	Edc3	100	99.016	Cricetulus_griseus_crigri
ENSMOCG00000016205	Edc3	99	69.094	ENSCSEG00000012996	edc3	99	69.094	Cynoglossus_semilaevis
ENSMOCG00000016205	Edc3	100	68.369	ENSCVAG00000008023	edc3	100	68.369	Cyprinodon_variegatus
ENSMOCG00000016205	Edc3	99	68.431	ENSDARG00000051931	edc3	99	68.431	Danio_rerio
ENSMOCG00000016205	Edc3	100	84.109	ENSDNOG00000030661	EDC3	100	84.109	Dasypus_novemcinctus
ENSMOCG00000016205	Edc3	64	94.545	ENSETEG00000002398	-	64	94.545	Echinops_telfairi
ENSMOCG00000016205	Edc3	100	96.850	ENSEASG00005005071	EDC3	100	96.850	Equus_asinus_asinus
ENSMOCG00000016205	Edc3	100	96.850	ENSECAG00000017994	EDC3	100	96.850	Equus_caballus
ENSMOCG00000016205	Edc3	100	65.302	ENSELUG00000005794	edc3	100	65.302	Esox_lucius
ENSMOCG00000016205	Edc3	100	62.231	ENSELUG00000007607	EDC3	100	62.231	Esox_lucius
ENSMOCG00000016205	Edc3	100	95.669	ENSFCAG00000002014	EDC3	100	95.669	Felis_catus
ENSMOCG00000016205	Edc3	98	85.170	ENSFALG00000004543	EDC3	96	85.170	Ficedula_albicollis
ENSMOCG00000016205	Edc3	100	95.079	ENSFDAG00000012582	EDC3	100	95.079	Fukomys_damarensis
ENSMOCG00000016205	Edc3	100	69.216	ENSFHEG00000009375	edc3	100	69.216	Fundulus_heteroclitus
ENSMOCG00000016205	Edc3	100	67.641	ENSGMOG00000002715	edc3	100	67.969	Gadus_morhua
ENSMOCG00000016205	Edc3	100	88.780	ENSGALG00000040181	EDC3	100	88.780	Gallus_gallus
ENSMOCG00000016205	Edc3	100	67.583	ENSGAFG00000014433	edc3	100	67.583	Gambusia_affinis
ENSMOCG00000016205	Edc3	100	67.780	ENSGACG00000009783	edc3	100	67.780	Gasterosteus_aculeatus
ENSMOCG00000016205	Edc3	99	55.126	ENSGACG00000014671	EDC3	99	56.117	Gasterosteus_aculeatus
ENSMOCG00000016205	Edc3	100	88.583	ENSGAGG00000023477	EDC3	100	88.583	Gopherus_agassizii
ENSMOCG00000016205	Edc3	100	96.654	ENSGGOG00000003552	EDC3	100	96.654	Gorilla_gorilla
ENSMOCG00000016205	Edc3	99	58.008	ENSHBUG00000020817	EDC3	99	58.008	Haplochromis_burtoni
ENSMOCG00000016205	Edc3	100	67.780	ENSHBUG00000003635	edc3	100	67.780	Haplochromis_burtoni
ENSMOCG00000016205	Edc3	100	67.773	ENSHCOG00000016834	edc3	100	67.906	Hippocampus_comes
ENSMOCG00000016205	Edc3	99	70.450	ENSIPUG00000005695	edc3	100	70.450	Ictalurus_punctatus
ENSMOCG00000016205	Edc3	100	96.654	ENSSTOG00000013936	EDC3	100	96.654	Ictidomys_tridecemlineatus
ENSMOCG00000016205	Edc3	100	96.063	ENSJJAG00000008074	Edc3	100	96.063	Jaculus_jaculus
ENSMOCG00000016205	Edc3	100	68.762	ENSKMAG00000001243	edc3	100	68.762	Kryptolebias_marmoratus
ENSMOCG00000016205	Edc3	100	55.945	ENSKMAG00000001987	EDC3	100	55.945	Kryptolebias_marmoratus
ENSMOCG00000016205	Edc3	100	68.824	ENSLBEG00000013435	edc3	99	68.824	Labrus_bergylta
ENSMOCG00000016205	Edc3	100	57.115	ENSLBEG00000017984	EDC3	100	57.115	Labrus_bergylta
ENSMOCG00000016205	Edc3	100	77.476	ENSLACG00000014149	EDC3	100	77.476	Latimeria_chalumnae
ENSMOCG00000016205	Edc3	99	66.992	ENSLOCG00000014625	edc3	99	67.251	Lepisosteus_oculatus
ENSMOCG00000016205	Edc3	100	94.882	ENSLAFG00000002992	EDC3	100	94.882	Loxodonta_africana
ENSMOCG00000016205	Edc3	100	97.244	ENSMFAG00000043074	EDC3	100	97.244	Macaca_fascicularis
ENSMOCG00000016205	Edc3	100	97.244	ENSMMUG00000011071	EDC3	100	97.244	Macaca_mulatta
ENSMOCG00000016205	Edc3	100	97.244	ENSMNEG00000035316	EDC3	100	97.244	Macaca_nemestrina
ENSMOCG00000016205	Edc3	100	97.441	ENSMLEG00000030372	EDC3	100	97.441	Mandrillus_leucophaeus
ENSMOCG00000016205	Edc3	99	56.445	ENSMAMG00000005423	-	99	56.445	Mastacembelus_armatus
ENSMOCG00000016205	Edc3	100	69.941	ENSMAMG00000000505	edc3	100	69.941	Mastacembelus_armatus
ENSMOCG00000016205	Edc3	99	58.008	ENSMZEG00005005654	EDC3	99	58.008	Maylandia_zebra
ENSMOCG00000016205	Edc3	100	67.780	ENSMZEG00005004892	edc3	100	67.780	Maylandia_zebra
ENSMOCG00000016205	Edc3	100	87.795	ENSMGAG00000002617	EDC3	100	87.795	Meleagris_gallopavo
ENSMOCG00000016205	Edc3	100	95.866	ENSMICG00000043190	EDC3	100	95.866	Microcebus_murinus
ENSMOCG00000016205	Edc3	99	68.959	ENSMMOG00000012278	edc3	99	69.094	Mola_mola
ENSMOCG00000016205	Edc3	100	92.520	ENSMODG00000009442	EDC3	100	92.520	Monodelphis_domestica
ENSMOCG00000016205	Edc3	100	69.745	ENSMALG00000008658	edc3	100	69.745	Monopterus_albus
ENSMOCG00000016205	Edc3	100	98.031	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSMOCG00000016205	Edc3	100	97.638	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSMOCG00000016205	Edc3	100	98.228	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSMOCG00000016205	Edc3	100	97.441	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSMOCG00000016205	Edc3	100	95.472	ENSMPUG00000017293	EDC3	100	95.472	Mustela_putorius_furo
ENSMOCG00000016205	Edc3	100	96.078	ENSMLUG00000016382	EDC3	100	96.078	Myotis_lucifugus
ENSMOCG00000016205	Edc3	100	97.244	ENSNGAG00000010923	Edc3	100	97.244	Nannospalax_galili
ENSMOCG00000016205	Edc3	99	58.008	ENSNBRG00000007881	EDC3	99	58.008	Neolamprologus_brichardi
ENSMOCG00000016205	Edc3	100	67.583	ENSNBRG00000002434	edc3	100	67.583	Neolamprologus_brichardi
ENSMOCG00000016205	Edc3	100	87.008	ENSNLEG00000014577	EDC3	100	87.008	Nomascus_leucogenys
ENSMOCG00000016205	Edc3	100	91.339	ENSMEUG00000009077	EDC3	100	91.339	Notamacropus_eugenii
ENSMOCG00000016205	Edc3	79	92.593	ENSOPRG00000009540	-	79	92.593	Ochotona_princeps
ENSMOCG00000016205	Edc3	99	59.259	ENSONIG00000002932	-	99	59.259	Oreochromis_niloticus
ENSMOCG00000016205	Edc3	100	67.976	ENSONIG00000008434	edc3	100	67.976	Oreochromis_niloticus
ENSMOCG00000016205	Edc3	78	91.436	ENSOCUG00000017740	EDC3	86	91.436	Oryctolagus_cuniculus
ENSMOCG00000016205	Edc3	100	68.173	ENSORLG00000004883	edc3	100	68.173	Oryzias_latipes
ENSMOCG00000016205	Edc3	100	56.250	ENSORLG00000014399	-	98	56.250	Oryzias_latipes
ENSMOCG00000016205	Edc3	100	56.250	ENSORLG00020019446	-	100	56.250	Oryzias_latipes_hni
ENSMOCG00000016205	Edc3	100	67.387	ENSORLG00020012262	edc3	100	67.387	Oryzias_latipes_hni
ENSMOCG00000016205	Edc3	100	56.250	ENSORLG00015017635	-	96	56.250	Oryzias_latipes_hsok
ENSMOCG00000016205	Edc3	100	67.773	ENSORLG00015005634	edc3	100	67.773	Oryzias_latipes_hsok
ENSMOCG00000016205	Edc3	100	56.055	ENSOMEG00000017354	EDC3	100	56.055	Oryzias_melastigma
ENSMOCG00000016205	Edc3	100	68.750	ENSOMEG00000014026	edc3	100	68.750	Oryzias_melastigma
ENSMOCG00000016205	Edc3	100	96.260	ENSOGAG00000014441	EDC3	100	96.260	Otolemur_garnettii
ENSMOCG00000016205	Edc3	100	95.481	ENSOARG00000003476	EDC3	100	95.874	Ovis_aries
ENSMOCG00000016205	Edc3	100	96.654	ENSPPAG00000040143	EDC3	100	96.654	Pan_paniscus
ENSMOCG00000016205	Edc3	100	96.063	ENSPPRG00000006257	EDC3	100	96.063	Panthera_pardus
ENSMOCG00000016205	Edc3	100	96.063	ENSPTIG00000017424	EDC3	100	96.063	Panthera_tigris_altaica
ENSMOCG00000016205	Edc3	100	96.654	ENSPTRG00000007279	EDC3	100	96.654	Pan_troglodytes
ENSMOCG00000016205	Edc3	100	97.441	ENSPANG00000015997	EDC3	100	97.441	Papio_anubis
ENSMOCG00000016205	Edc3	100	68.164	ENSPKIG00000004416	edc3	100	69.141	Paramormyrops_kingsleyae
ENSMOCG00000016205	Edc3	100	66.406	ENSPKIG00000019810	EDC3	100	66.406	Paramormyrops_kingsleyae
ENSMOCG00000016205	Edc3	100	83.268	ENSPSIG00000008474	EDC3	100	83.268	Pelodiscus_sinensis
ENSMOCG00000016205	Edc3	100	67.123	ENSPMGG00000007223	edc3	100	67.123	Periophthalmus_magnuspinnatus
ENSMOCG00000016205	Edc3	100	98.228	ENSPEMG00000015260	Edc3	100	98.228	Peromyscus_maniculatus_bairdii
ENSMOCG00000016205	Edc3	100	90.354	ENSPCIG00000006276	EDC3	70	90.533	Phascolarctos_cinereus
ENSMOCG00000016205	Edc3	100	68.762	ENSPFOG00000012204	edc3	100	68.762	Poecilia_formosa
ENSMOCG00000016205	Edc3	100	68.762	ENSPLAG00000014420	edc3	100	68.762	Poecilia_latipinna
ENSMOCG00000016205	Edc3	100	68.762	ENSPMEG00000023289	edc3	100	68.762	Poecilia_mexicana
ENSMOCG00000016205	Edc3	100	68.959	ENSPREG00000016022	edc3	100	68.959	Poecilia_reticulata
ENSMOCG00000016205	Edc3	100	95.472	ENSPPYG00000006642	EDC3	100	95.472	Pongo_abelii
ENSMOCG00000016205	Edc3	88	96.947	ENSPCAG00000002802	EDC3	88	96.947	Procavia_capensis
ENSMOCG00000016205	Edc3	100	96.654	ENSPCOG00000013364	EDC3	100	96.654	Propithecus_coquereli
ENSMOCG00000016205	Edc3	100	95.472	ENSPVAG00000014733	EDC3	100	95.472	Pteropus_vampyrus
ENSMOCG00000016205	Edc3	100	67.780	ENSPNYG00000021797	edc3	100	67.780	Pundamilia_nyererei
ENSMOCG00000016205	Edc3	99	58.008	ENSPNYG00000009669	EDC3	99	58.008	Pundamilia_nyererei
ENSMOCG00000016205	Edc3	100	69.455	ENSPNAG00000019657	edc3	100	69.455	Pygocentrus_nattereri
ENSMOCG00000016205	Edc3	99	97.628	ENSRNOG00000019579	Edc3	100	97.628	Rattus_norvegicus
ENSMOCG00000016205	Edc3	100	97.047	ENSRBIG00000019488	EDC3	100	97.047	Rhinopithecus_bieti
ENSMOCG00000016205	Edc3	100	97.047	ENSRROG00000034959	EDC3	100	97.047	Rhinopithecus_roxellana
ENSMOCG00000016205	Edc3	100	96.850	ENSSBOG00000004896	EDC3	100	96.850	Saimiri_boliviensis_boliviensis
ENSMOCG00000016205	Edc3	96	92.025	ENSSHAG00000015075	EDC3	95	92.025	Sarcophilus_harrisii
ENSMOCG00000016205	Edc3	100	64.591	ENSSFOG00015002439	edc3	100	64.591	Scleropages_formosus
ENSMOCG00000016205	Edc3	100	69.750	ENSSFOG00015016939	edc3	100	70.428	Scleropages_formosus
ENSMOCG00000016205	Edc3	100	68.959	ENSSMAG00000010695	edc3	100	68.959	Scophthalmus_maximus
ENSMOCG00000016205	Edc3	99	56.893	ENSSMAG00000010176	-	99	56.893	Scophthalmus_maximus
ENSMOCG00000016205	Edc3	100	59.073	ENSSDUG00000007671	EDC3	100	59.073	Seriola_dumerili
ENSMOCG00000016205	Edc3	100	69.020	ENSSDUG00000021844	edc3	100	69.020	Seriola_dumerili
ENSMOCG00000016205	Edc3	100	69.020	ENSSLDG00000022046	edc3	100	69.020	Seriola_lalandi_dorsalis
ENSMOCG00000016205	Edc3	81	96.774	ENSSARG00000003907	EDC3	80	96.774	Sorex_araneus
ENSMOCG00000016205	Edc3	100	88.976	ENSSPUG00000008232	EDC3	100	88.976	Sphenodon_punctatus
ENSMOCG00000016205	Edc3	100	56.809	ENSSPAG00000020327	EDC3	100	57.087	Stegastes_partitus
ENSMOCG00000016205	Edc3	100	69.412	ENSSPAG00000010009	edc3	100	69.412	Stegastes_partitus
ENSMOCG00000016205	Edc3	100	96.457	ENSSSCG00000001903	EDC3	100	96.457	Sus_scrofa
ENSMOCG00000016205	Edc3	100	88.583	ENSTGUG00000004007	EDC3	100	88.583	Taeniopygia_guttata
ENSMOCG00000016205	Edc3	100	69.548	ENSTRUG00000017078	edc3	100	69.548	Takifugu_rubripes
ENSMOCG00000016205	Edc3	100	68.297	ENSTNIG00000016047	edc3	100	68.297	Tetraodon_nigroviridis
ENSMOCG00000016205	Edc3	100	95.866	ENSTTRG00000007990	EDC3	100	95.866	Tursiops_truncatus
ENSMOCG00000016205	Edc3	100	95.866	ENSUAMG00000026710	-	100	95.866	Ursus_americanus
ENSMOCG00000016205	Edc3	100	95.866	ENSUMAG00000005006	EDC3	96	95.866	Ursus_maritimus
ENSMOCG00000016205	Edc3	79	84.104	ENSVPAG00000003499	-	79	84.104	Vicugna_pacos
ENSMOCG00000016205	Edc3	100	95.866	ENSVVUG00000018601	EDC3	100	95.866	Vulpes_vulpes
ENSMOCG00000016205	Edc3	68	81.897	ENSXETG00000010622	edc3	99	83.046	Xenopus_tropicalis
ENSMOCG00000016205	Edc3	100	68.566	ENSXMAG00000007377	edc3	100	68.566	Xiphophorus_maculatus