EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000016291 (Gene tree)
Gene ID: 101981788
Gene Symbol: Ybx3
Alias: Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 24867 bases
Position: chrJH996476.1:1299420-1324286
Accession: 101981788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000017816	CSD	PF00313.22	1.3e-26	1	1
ENSMOCP00000017813	CSD	PF00313.22	1.7e-26	1	1
ENSMOCP00000017819	CSD	PF00313.22	2.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000021606	-	1017	-	ENSMOCP00000017813	338 (aa)	-	-
ENSMOCT00000021612	-	708	-	ENSMOCP00000017819	235 (aa)	-	-
ENSMOCT00000021609	-	1497	XM_013354487	ENSMOCP00000017816	304 (aa)	XP_013209941	-

Gene Model

Click here to download ENSMOCG00000016291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000016291's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000016291	Ybx3	100	49.640	ENSMOCG00000002864	-	98	48.243
ENSMOCG00000016291	Ybx3	93	53.150	ENSMOCG00000010734	-	96	49.684
ENSMOCG00000016291	Ybx3	92	52.917	ENSMOCG00000004348	-	95	45.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000016291	Ybx3	96	91.186	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSMOCG00000016291	Ybx3	94	94.118	ENSAMEG00000009393	YBX3	86	92.053	Ailuropoda_melanoleuca
ENSMOCG00000016291	Ybx3	91	98.077	ENSAPLG00000003147	YBX3	76	98.077	Anas_platyrhynchos
ENSMOCG00000016291	Ybx3	96	91.525	ENSANAG00000024492	-	98	90.615	Aotus_nancymaae
ENSMOCG00000016291	Ybx3	94	67.100	ENSANAG00000033366	-	74	80.822	Aotus_nancymaae
ENSMOCG00000016291	Ybx3	100	90.554	ENSBTAG00000009663	YBX3	80	88.079	Bos_taurus
ENSMOCG00000016291	Ybx3	99	68.033	ENSCJAG00000033824	-	88	84.810	Callithrix_jacchus
ENSMOCG00000016291	Ybx3	96	91.186	ENSCJAG00000021660	-	84	89.068	Callithrix_jacchus
ENSMOCG00000016291	Ybx3	94	93.031	ENSCAFG00000013401	YBX3	100	93.548	Canis_familiaris
ENSMOCG00000016291	Ybx3	95	90.411	ENSCAFG00020006412	YBX3	80	90.397	Canis_lupus_dingo
ENSMOCG00000016291	Ybx3	100	90.554	ENSCHIG00000010863	YBX3	85	91.060	Capra_hircus
ENSMOCG00000016291	Ybx3	94	81.696	ENSTSYG00000035821	-	72	95.745	Carlito_syrichta
ENSMOCG00000016291	Ybx3	93	93.031	ENSTSYG00000004204	-	96	88.254	Carlito_syrichta
ENSMOCG00000016291	Ybx3	93	87.762	ENSCAPG00000015039	YBX3	93	87.762	Cavia_aperea
ENSMOCG00000016291	Ybx3	86	100.000	ENSCPOG00000011329	YBX3	86	91.416	Cavia_porcellus
ENSMOCG00000016291	Ybx3	96	90.847	ENSCCAG00000016469	YBX3	84	89.068	Cebus_capucinus
ENSMOCG00000016291	Ybx3	96	90.508	ENSCATG00000034411	YBX3	83	88.746	Cercocebus_atys
ENSMOCG00000016291	Ybx3	93	89.161	ENSCLAG00000016030	YBX3	94	89.161	Chinchilla_lanigera
ENSMOCG00000016291	Ybx3	96	90.847	ENSCSAG00000008744	YBX3	83	89.068	Chlorocebus_sabaeus
ENSMOCG00000016291	Ybx3	94	96.429	ENSCHOG00000011988	YBX3	60	96.429	Choloepus_hoffmanni
ENSMOCG00000016291	Ybx3	93	84.091	ENSCPBG00000014147	YBX3	74	89.524	Chrysemys_picta_bellii
ENSMOCG00000016291	Ybx3	71	58.140	ENSCING00000010654	yb1/2/3	73	50.679	Ciona_intestinalis
ENSMOCG00000016291	Ybx3	96	90.847	ENSCANG00000036801	YBX3	98	89.968	Colobus_angolensis_palliatus
ENSMOCG00000016291	Ybx3	100	99.574	ENSCGRG00001016148	Ybx3	86	97.735	Cricetulus_griseus_chok1gshd
ENSMOCG00000016291	Ybx3	93	97.578	ENSCGRG00000004563	Ybx3	98	97.578	Cricetulus_griseus_crigri
ENSMOCG00000016291	Ybx3	99	87.662	ENSDORG00000009103	Ybx3	89	86.076	Dipodomys_ordii
ENSMOCG00000016291	Ybx3	92	84.266	ENSETEG00000002557	YBX3	99	82.746	Echinops_telfairi
ENSMOCG00000016291	Ybx3	96	87.755	ENSEASG00005014726	YBX3	81	88.079	Equus_asinus_asinus
ENSMOCG00000016291	Ybx3	96	91.497	ENSECAG00000013777	YBX3	81	91.722	Equus_caballus
ENSMOCG00000016291	Ybx3	92	90.493	ENSEEUG00000010415	YBX3	100	91.901	Erinaceus_europaeus
ENSMOCG00000016291	Ybx3	96	91.864	ENSFCAG00000027748	YBX3	81	93.399	Felis_catus
ENSMOCG00000016291	Ybx3	91	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSMOCG00000016291	Ybx3	84	97.727	ENSFDAG00000021192	YBX3	92	85.315	Fukomys_damarensis
ENSMOCG00000016291	Ybx3	92	83.562	ENSGALG00000031890	YBX3	76	88.889	Gallus_gallus
ENSMOCG00000016291	Ybx3	93	80.543	ENSGAGG00000017780	YBX3	76	89.815	Gopherus_agassizii
ENSMOCG00000016291	Ybx3	96	91.186	ENSGGOG00000001352	YBX3	83	89.389	Gorilla_gorilla
ENSMOCG00000016291	Ybx3	99	77.632	ENSHGLG00000014798	-	90	80.000	Heterocephalus_glaber_female
ENSMOCG00000016291	Ybx3	89	79.779	ENSHGLG00000015495	-	85	78.819	Heterocephalus_glaber_female
ENSMOCG00000016291	Ybx3	91	91.743	ENSHGLG00100003589	YBX3	87	91.743	Heterocephalus_glaber_male
ENSMOCG00000016291	Ybx3	93	87.324	ENSSTOG00000002108	-	88	87.324	Ictidomys_tridecemlineatus
ENSMOCG00000016291	Ybx3	96	87.415	ENSSTOG00000032577	-	86	87.417	Ictidomys_tridecemlineatus
ENSMOCG00000016291	Ybx3	96	70.068	ENSJJAG00000014239	Ybx3	100	84.375	Jaculus_jaculus
ENSMOCG00000016291	Ybx3	96	93.878	ENSLAFG00000017247	YBX3	90	88.742	Loxodonta_africana
ENSMOCG00000016291	Ybx3	96	90.847	ENSMFAG00000039369	YBX3	84	89.068	Macaca_fascicularis
ENSMOCG00000016291	Ybx3	96	90.847	ENSMMUG00000022469	YBX3	96	89.068	Macaca_mulatta
ENSMOCG00000016291	Ybx3	96	90.847	ENSMNEG00000045109	YBX3	84	89.068	Macaca_nemestrina
ENSMOCG00000016291	Ybx3	93	91.608	ENSMLEG00000033618	YBX3	81	91.608	Mandrillus_leucophaeus
ENSMOCG00000016291	Ybx3	89	98.095	ENSMGAG00000014224	YBX3	93	100.000	Meleagris_gallopavo
ENSMOCG00000016291	Ybx3	100	98.723	ENSMAUG00000012185	Ybx3	97	97.087	Mesocricetus_auratus
ENSMOCG00000016291	Ybx3	98	80.687	ENSMICG00000031459	-	82	78.541	Microcebus_murinus
ENSMOCG00000016291	Ybx3	95	94.863	ENSMICG00000038002	-	82	94.702	Microcebus_murinus
ENSMOCG00000016291	Ybx3	93	83.916	ENSMODG00000018248	YBX3	91	83.624	Monodelphis_domestica
ENSMOCG00000016291	Ybx3	100	98.355	MGP_CAROLIEiJ_G0028947	Ybx3	86	96.764	Mus_caroli
ENSMOCG00000016291	Ybx3	100	97.872	ENSMUSG00000030189	Ybx3	86	96.117	Mus_musculus
ENSMOCG00000016291	Ybx3	100	98.723	MGP_PahariEiJ_G0022709	Ybx3	86	96.764	Mus_pahari
ENSMOCG00000016291	Ybx3	100	98.298	MGP_SPRETEiJ_G0029994	Ybx3	86	96.440	Mus_spretus
ENSMOCG00000016291	Ybx3	95	74.086	ENSMPUG00000011810	YBX3	82	76.527	Mustela_putorius_furo
ENSMOCG00000016291	Ybx3	86	90.706	ENSMLUG00000007476	YBX3	100	90.706	Myotis_lucifugus
ENSMOCG00000016291	Ybx3	96	89.456	ENSNGAG00000000710	Ybx3	95	88.841	Nannospalax_galili
ENSMOCG00000016291	Ybx3	96	88.475	ENSNLEG00000034844	YBX3	88	85.531	Nomascus_leucogenys
ENSMOCG00000016291	Ybx3	57	77.457	ENSMEUG00000002507	-	81	77.457	Notamacropus_eugenii
ENSMOCG00000016291	Ybx3	96	84.407	ENSODEG00000017957	YBX3	89	84.768	Octodon_degus
ENSMOCG00000016291	Ybx3	96	88.435	ENSOCUG00000001889	YBX3	88	88.079	Oryctolagus_cuniculus
ENSMOCG00000016291	Ybx3	94	98.230	ENSOGAG00000013245	YBX3	82	91.586	Otolemur_garnettii
ENSMOCG00000016291	Ybx3	88	98.969	ENSOARG00000020919	YBX3	99	81.605	Ovis_aries
ENSMOCG00000016291	Ybx3	95	91.126	ENSPPAG00000039068	YBX3	87	88.854	Pan_paniscus
ENSMOCG00000016291	Ybx3	96	92.203	ENSPPRG00000005859	YBX3	81	93.729	Panthera_pardus
ENSMOCG00000016291	Ybx3	93	93.662	ENSPTIG00000005322	YBX3	81	93.357	Panthera_tigris_altaica
ENSMOCG00000016291	Ybx3	96	91.186	ENSPTRG00000004681	YBX3	83	89.389	Pan_troglodytes
ENSMOCG00000016291	Ybx3	96	90.508	ENSPANG00000010280	YBX3	84	88.746	Papio_anubis
ENSMOCG00000016291	Ybx3	91	84.651	ENSPSIG00000009247	YBX3	100	84.651	Pelodiscus_sinensis
ENSMOCG00000016291	Ybx3	100	99.149	ENSPEMG00000012132	-	98	97.411	Peromyscus_maniculatus_bairdii
ENSMOCG00000016291	Ybx3	100	99.149	ENSPEMG00000010391	-	89	99.149	Peromyscus_maniculatus_bairdii
ENSMOCG00000016291	Ybx3	84	81.853	ENSPCIG00000029949	YBX3	100	81.853	Phascolarctos_cinereus
ENSMOCG00000016291	Ybx3	96	90.847	ENSPPYG00000004279	YBX3	84	89.068	Pongo_abelii
ENSMOCG00000016291	Ybx3	70	93.953	ENSPCAG00000001397	YBX3	77	93.722	Procavia_capensis
ENSMOCG00000016291	Ybx3	63	91.623	ENSPCOG00000011663	YBX3	82	85.308	Propithecus_coquereli
ENSMOCG00000016291	Ybx3	98	79.000	ENSPVAG00000006740	YBX3	83	78.457	Pteropus_vampyrus
ENSMOCG00000016291	Ybx3	100	99.013	ENSRNOG00000005480	Ybx3	86	97.411	Rattus_norvegicus
ENSMOCG00000016291	Ybx3	95	90.785	ENSRBIG00000039208	YBX3	84	88.746	Rhinopithecus_bieti
ENSMOCG00000016291	Ybx3	96	90.847	ENSRROG00000029638	YBX3	84	89.068	Rhinopithecus_roxellana
ENSMOCG00000016291	Ybx3	93	92.727	ENSSBOG00000030573	YBX3	87	89.527	Saimiri_boliviensis_boliviensis
ENSMOCG00000016291	Ybx3	83	98.837	ENSSHAG00000003262	YBX3	98	82.818	Sarcophilus_harrisii
ENSMOCG00000016291	Ybx3	58	89.928	ENSSPUG00000009911	-	73	87.179	Sphenodon_punctatus
ENSMOCG00000016291	Ybx3	94	92.414	ENSSSCG00000000633	YBX3	82	92.332	Sus_scrofa
ENSMOCG00000016291	Ybx3	89	97.143	ENSTGUG00000012047	YBX3	75	97.143	Taeniopygia_guttata
ENSMOCG00000016291	Ybx3	94	92.734	ENSTBEG00000012570	YBX3	81	92.833	Tupaia_belangeri
ENSMOCG00000016291	Ybx3	86	82.331	ENSTTRG00000008045	YBX3	100	83.459	Tursiops_truncatus
ENSMOCG00000016291	Ybx3	90	90.253	ENSUAMG00000016662	YBX3	100	90.253	Ursus_americanus
ENSMOCG00000016291	Ybx3	93	93.662	ENSUMAG00000016118	YBX3	94	93.357	Ursus_maritimus
ENSMOCG00000016291	Ybx3	73	100.000	ENSVPAG00000000876	YBX3	100	70.775	Vicugna_pacos
ENSMOCG00000016291	Ybx3	90	89.531	ENSVVUG00000004956	YBX3	100	89.531	Vulpes_vulpes
ENSMOCG00000016291	Ybx3	92	72.727	ENSXETG00000016239	ybx3	87	83.810	Xenopus_tropicalis