EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000016587 (Gene tree)
Gene ID: 101981118
Gene Symbol: Rc3h1
Alias: 5730557L09Rik|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 42946 bases
Position: chrJH996427.1:10148597-10191542
Accession: 101981118
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000018239	zf-CCCH	PF00642.24	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000022037	-	3228	XM_013352493	ENSMOCP00000018239	1075 (aa)	XP_013207947	-

Gene Model

Click here to download ENSMOCG00000016587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000016587's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000016587	Rc3h1	89	51.680	ENSMOCG00000009592	Rc3h2	81	51.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000016587	Rc3h1	98	92.519	ENSG00000135870	RC3H1	93	92.898	Homo_sapiens
ENSMOCG00000016587	Rc3h1	98	93.081	ENSAMEG00000015657	RC3H1	93	93.081	Ailuropoda_melanoleuca
ENSMOCG00000016587	Rc3h1	98	84.644	ENSAPLG00000005341	RC3H1	93	84.067	Anas_platyrhynchos
ENSMOCG00000016587	Rc3h1	98	81.895	ENSACAG00000015271	RC3H1	93	81.861	Anolis_carolinensis
ENSMOCG00000016587	Rc3h1	98	92.614	ENSANAG00000036716	RC3H1	93	93.087	Aotus_nancymaae
ENSMOCG00000016587	Rc3h1	98	91.193	ENSBTAG00000052708	RC3H1	93	91.572	Bos_taurus
ENSMOCG00000016587	Rc3h1	98	92.519	ENSCJAG00000009106	RC3H1	93	92.992	Callithrix_jacchus
ENSMOCG00000016587	Rc3h1	98	93.081	ENSCAFG00000014434	RC3H1	93	93.460	Canis_familiaris
ENSMOCG00000016587	Rc3h1	98	92.992	ENSCAFG00020017112	RC3H1	93	93.371	Canis_lupus_dingo
ENSMOCG00000016587	Rc3h1	98	91.469	ENSCHIG00000002873	RC3H1	93	91.848	Capra_hircus
ENSMOCG00000016587	Rc3h1	98	91.564	ENSTSYG00000003913	RC3H1	93	91.848	Carlito_syrichta
ENSMOCG00000016587	Rc3h1	98	89.100	ENSCPOG00000004349	RC3H1	93	89.100	Cavia_porcellus
ENSMOCG00000016587	Rc3h1	98	90.625	ENSCCAG00000025652	RC3H1	93	91.098	Cebus_capucinus
ENSMOCG00000016587	Rc3h1	98	92.614	ENSCATG00000033497	RC3H1	93	92.992	Cercocebus_atys
ENSMOCG00000016587	Rc3h1	98	91.856	ENSCLAG00000011267	RC3H1	93	92.140	Chinchilla_lanigera
ENSMOCG00000016587	Rc3h1	94	92.567	ENSCSAG00000011823	RC3H1	79	92.963	Chlorocebus_sabaeus
ENSMOCG00000016587	Rc3h1	98	86.158	ENSCPBG00000014670	RC3H1	93	85.687	Chrysemys_picta_bellii
ENSMOCG00000016587	Rc3h1	98	92.621	ENSCANG00000032120	RC3H1	93	92.999	Colobus_angolensis_palliatus
ENSMOCG00000016587	Rc3h1	98	96.486	ENSCGRG00001020812	Rc3h1	93	96.486	Cricetulus_griseus_chok1gshd
ENSMOCG00000016587	Rc3h1	98	96.486	ENSCGRG00000011952	Rc3h1	93	96.486	Cricetulus_griseus_crigri
ENSMOCG00000016587	Rc3h1	58	90.193	ENSDNOG00000011494	RC3H1	99	90.836	Dasypus_novemcinctus
ENSMOCG00000016587	Rc3h1	98	91.848	ENSDORG00000004855	Rc3h1	93	92.227	Dipodomys_ordii
ENSMOCG00000016587	Rc3h1	85	94.238	ENSETEG00000012064	RC3H1	87	94.238	Echinops_telfairi
ENSMOCG00000016587	Rc3h1	98	91.280	ENSEASG00005017000	RC3H1	93	91.564	Equus_asinus_asinus
ENSMOCG00000016587	Rc3h1	98	91.090	ENSECAG00000021208	RC3H1	93	91.374	Equus_caballus
ENSMOCG00000016587	Rc3h1	80	94.958	ENSEEUG00000014861	RC3H1	86	78.788	Erinaceus_europaeus
ENSMOCG00000016587	Rc3h1	98	92.992	ENSFCAG00000014924	RC3H1	93	93.371	Felis_catus
ENSMOCG00000016587	Rc3h1	98	83.490	ENSFALG00000002947	RC3H1	93	82.817	Ficedula_albicollis
ENSMOCG00000016587	Rc3h1	98	91.951	ENSFDAG00000013303	RC3H1	93	92.140	Fukomys_damarensis
ENSMOCG00000016587	Rc3h1	98	84.072	ENSGALG00000004587	RC3H1	93	83.491	Gallus_gallus
ENSMOCG00000016587	Rc3h1	98	84.275	ENSGAGG00000018194	RC3H1	93	84.181	Gopherus_agassizii
ENSMOCG00000016587	Rc3h1	98	85.890	ENSGGOG00000005735	RC3H1	93	86.269	Gorilla_gorilla
ENSMOCG00000016587	Rc3h1	85	85.952	ENSHGLG00000004183	-	92	85.952	Heterocephalus_glaber_female
ENSMOCG00000016587	Rc3h1	98	90.814	ENSHGLG00100008577	RC3H1	93	91.098	Heterocephalus_glaber_male
ENSMOCG00000016587	Rc3h1	98	92.986	ENSSTOG00000016033	RC3H1	93	93.649	Ictidomys_tridecemlineatus
ENSMOCG00000016587	Rc3h1	98	92.979	ENSJJAG00000018915	Rc3h1	93	93.074	Jaculus_jaculus
ENSMOCG00000016587	Rc3h1	98	72.336	ENSLACG00000016186	RC3H1	92	75.657	Latimeria_chalumnae
ENSMOCG00000016587	Rc3h1	95	93.039	ENSLAFG00000004367	RC3H1	93	93.431	Loxodonta_africana
ENSMOCG00000016587	Rc3h1	98	92.519	ENSMFAG00000033725	RC3H1	93	92.898	Macaca_fascicularis
ENSMOCG00000016587	Rc3h1	98	92.614	ENSMMUG00000000630	RC3H1	93	92.992	Macaca_mulatta
ENSMOCG00000016587	Rc3h1	98	92.614	ENSMNEG00000035968	RC3H1	93	92.992	Macaca_nemestrina
ENSMOCG00000016587	Rc3h1	98	92.519	ENSMLEG00000037455	RC3H1	93	92.898	Mandrillus_leucophaeus
ENSMOCG00000016587	Rc3h1	85	96.605	ENSMAUG00000020864	Rc3h1	86	96.605	Mesocricetus_auratus
ENSMOCG00000016587	Rc3h1	98	92.796	ENSMICG00000003000	RC3H1	93	93.175	Microcebus_murinus
ENSMOCG00000016587	Rc3h1	98	89.120	ENSMODG00000004289	RC3H1	93	89.215	Monodelphis_domestica
ENSMOCG00000016587	Rc3h1	98	95.632	MGP_CAROLIEiJ_G0014756	Rc3h1	93	95.632	Mus_caroli
ENSMOCG00000016587	Rc3h1	98	95.442	ENSMUSG00000040423	Rc3h1	93	95.442	Mus_musculus
ENSMOCG00000016587	Rc3h1	98	95.442	MGP_PahariEiJ_G0027992	Rc3h1	93	95.442	Mus_pahari
ENSMOCG00000016587	Rc3h1	98	95.252	MGP_SPRETEiJ_G0015563	Rc3h1	93	95.252	Mus_spretus
ENSMOCG00000016587	Rc3h1	98	92.986	ENSMPUG00000004747	RC3H1	93	92.986	Mustela_putorius_furo
ENSMOCG00000016587	Rc3h1	98	91.461	ENSMLUG00000011127	RC3H1	93	91.841	Myotis_lucifugus
ENSMOCG00000016587	Rc3h1	98	95.347	ENSNGAG00000011135	Rc3h1	93	95.347	Nannospalax_galili
ENSMOCG00000016587	Rc3h1	98	92.898	ENSNLEG00000015327	RC3H1	93	93.277	Nomascus_leucogenys
ENSMOCG00000016587	Rc3h1	94	82.150	ENSOPRG00000013068	RC3H1	90	82.544	Ochotona_princeps
ENSMOCG00000016587	Rc3h1	98	92.045	ENSODEG00000014185	RC3H1	93	92.045	Octodon_degus
ENSMOCG00000016587	Rc3h1	98	87.453	ENSOANG00000000924	RC3H1	93	87.734	Ornithorhynchus_anatinus
ENSMOCG00000016587	Rc3h1	96	92.012	ENSOCUG00000004930	RC3H1	92	92.397	Oryctolagus_cuniculus
ENSMOCG00000016587	Rc3h1	98	85.147	ENSOGAG00000004044	RC3H1	93	85.525	Otolemur_garnettii
ENSMOCG00000016587	Rc3h1	98	91.533	ENSOARG00000013011	RC3H1	93	91.910	Ovis_aries
ENSMOCG00000016587	Rc3h1	98	92.526	ENSPPAG00000039253	RC3H1	93	92.904	Pan_paniscus
ENSMOCG00000016587	Rc3h1	98	92.512	ENSPPRG00000009007	RC3H1	93	92.891	Panthera_pardus
ENSMOCG00000016587	Rc3h1	98	92.642	ENSPTIG00000015326	RC3H1	93	93.113	Panthera_tigris_altaica
ENSMOCG00000016587	Rc3h1	98	92.526	ENSPTRG00000001702	RC3H1	93	92.904	Pan_troglodytes
ENSMOCG00000016587	Rc3h1	98	92.519	ENSPANG00000008886	RC3H1	93	92.898	Papio_anubis
ENSMOCG00000016587	Rc3h1	98	86.359	ENSPSIG00000016181	RC3H1	93	86.265	Pelodiscus_sinensis
ENSMOCG00000016587	Rc3h1	98	96.011	ENSPEMG00000011966	Rc3h1	93	96.011	Peromyscus_maniculatus_bairdii
ENSMOCG00000016587	Rc3h1	66	92.135	ENSPCIG00000002058	RC3H1	89	92.135	Phascolarctos_cinereus
ENSMOCG00000016587	Rc3h1	98	89.773	ENSPPYG00000000490	RC3H1	91	92.562	Pongo_abelii
ENSMOCG00000016587	Rc3h1	85	97.368	ENSPCAG00000010775	RC3H1	87	97.368	Procavia_capensis
ENSMOCG00000016587	Rc3h1	87	91.765	ENSPCOG00000021795	RC3H1	96	92.193	Propithecus_coquereli
ENSMOCG00000016587	Rc3h1	92	97.765	ENSPVAG00000007593	RC3H1	93	83.886	Pteropus_vampyrus
ENSMOCG00000016587	Rc3h1	95	58.824	ENSPNAG00000023439	rc3h1a	79	90.463	Pygocentrus_nattereri
ENSMOCG00000016587	Rc3h1	98	92.715	ENSRBIG00000037743	RC3H1	93	93.094	Rhinopithecus_bieti
ENSMOCG00000016587	Rc3h1	98	92.708	ENSRROG00000036546	RC3H1	93	93.087	Rhinopithecus_roxellana
ENSMOCG00000016587	Rc3h1	98	84.608	ENSSBOG00000010664	RC3H1	100	87.500	Saimiri_boliviensis_boliviensis
ENSMOCG00000016587	Rc3h1	98	87.996	ENSSHAG00000007589	RC3H1	93	88.091	Sarcophilus_harrisii
ENSMOCG00000016587	Rc3h1	80	93.865	ENSSARG00000004660	RC3H1	75	93.865	Sorex_araneus
ENSMOCG00000016587	Rc3h1	98	80.639	ENSSPUG00000018472	RC3H1	93	81.279	Sphenodon_punctatus
ENSMOCG00000016587	Rc3h1	98	93.175	ENSSSCG00000015498	RC3H1	93	93.555	Sus_scrofa
ENSMOCG00000016587	Rc3h1	98	84.057	ENSTGUG00000004090	RC3H1	93	83.286	Taeniopygia_guttata
ENSMOCG00000016587	Rc3h1	86	94.368	ENSTBEG00000005015	RC3H1	82	94.368	Tupaia_belangeri
ENSMOCG00000016587	Rc3h1	98	92.155	ENSTTRG00000008572	RC3H1	93	92.533	Tursiops_truncatus
ENSMOCG00000016587	Rc3h1	98	92.701	ENSUAMG00000019525	RC3H1	93	92.701	Ursus_americanus
ENSMOCG00000016587	Rc3h1	98	93.182	ENSUMAG00000020087	RC3H1	93	93.182	Ursus_maritimus
ENSMOCG00000016587	Rc3h1	89	97.275	ENSVPAG00000002591	RC3H1	85	97.275	Vicugna_pacos
ENSMOCG00000016587	Rc3h1	98	92.729	ENSVVUG00000014201	RC3H1	93	93.107	Vulpes_vulpes
ENSMOCG00000016587	Rc3h1	98	75.187	ENSXETG00000020030	rc3h1	93	75.093	Xenopus_tropicalis