EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000016660 (Gene tree)
Gene ID: 101985155
Gene Symbol: Rtca
Alias: 2310009A18Rik|Rtcd1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 23521 bases
Position: chr21:13839701-13863221
Accession: 101985155
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000018332	RTC	PF01137.21	1.9e-87	1	1
ENSMOCP00000018332	RTC_insert	PF05189.13	1.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000022133	-	2441	XM_005357184	ENSMOCP00000018332	366 (aa)	XP_005357241	UPI00038C49AD

Gene Model

Click here to download ENSMOCG00000016660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000016660's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000016660	Rtca	100	91.803	ENSG00000137996	RTCA	100	93.878	Homo_sapiens
ENSMOCG00000016660	Rtca	100	69.945	ENSAPOG00000001345	rtca	99	69.945	Acanthochromis_polyacanthus
ENSMOCG00000016660	Rtca	73	92.565	ENSAMEG00000008855	RTCA	100	92.565	Ailuropoda_melanoleuca
ENSMOCG00000016660	Rtca	100	70.219	ENSACIG00000019643	rtca	100	70.219	Amphilophus_citrinellus
ENSMOCG00000016660	Rtca	100	69.945	ENSAOCG00000014979	rtca	99	69.945	Amphiprion_ocellaris
ENSMOCG00000016660	Rtca	100	69.945	ENSAPEG00000006945	rtca	99	69.945	Amphiprion_percula
ENSMOCG00000016660	Rtca	100	68.579	ENSATEG00000006315	rtca	100	68.579	Anabas_testudineus
ENSMOCG00000016660	Rtca	96	79.944	ENSAPLG00000015430	RTCA	100	79.944	Anas_platyrhynchos
ENSMOCG00000016660	Rtca	100	91.530	ENSANAG00000025446	RTCA	100	91.530	Aotus_nancymaae
ENSMOCG00000016660	Rtca	100	69.126	ENSACLG00000020770	rtca	99	69.126	Astatotilapia_calliptera
ENSMOCG00000016660	Rtca	98	72.222	ENSAMXG00000043271	rtca	98	72.222	Astyanax_mexicanus
ENSMOCG00000016660	Rtca	100	93.169	ENSBTAG00000006321	RTCA	100	93.169	Bos_taurus
ENSMOCG00000016660	Rtca	100	91.530	ENSCJAG00000003398	RTCA	100	91.530	Callithrix_jacchus
ENSMOCG00000016660	Rtca	100	92.896	ENSCAFG00000020010	RTCA	68	92.896	Canis_familiaris
ENSMOCG00000016660	Rtca	100	92.896	ENSCAFG00020011528	RTCA	57	92.896	Canis_lupus_dingo
ENSMOCG00000016660	Rtca	100	92.896	ENSCHIG00000018937	RTCA	100	92.896	Capra_hircus
ENSMOCG00000016660	Rtca	100	92.896	ENSTSYG00000011305	RTCA	100	92.896	Carlito_syrichta
ENSMOCG00000016660	Rtca	100	91.257	ENSCCAG00000021844	RTCA	100	91.257	Cebus_capucinus
ENSMOCG00000016660	Rtca	100	88.918	ENSCATG00000019364	RTCA	100	91.586	Cercocebus_atys
ENSMOCG00000016660	Rtca	87	92.429	ENSCLAG00000006125	RTCA	100	92.429	Chinchilla_lanigera
ENSMOCG00000016660	Rtca	100	92.350	ENSCSAG00000001509	RTCA	100	92.350	Chlorocebus_sabaeus
ENSMOCG00000016660	Rtca	100	92.896	ENSCHOG00000005211	RTCA	100	92.896	Choloepus_hoffmanni
ENSMOCG00000016660	Rtca	100	82.787	ENSCPBG00000026658	RTCA	100	82.787	Chrysemys_picta_bellii
ENSMOCG00000016660	Rtca	98	55.278	ENSCING00000007875	-	98	55.278	Ciona_intestinalis
ENSMOCG00000016660	Rtca	98	54.444	ENSCSAVG00000007269	-	98	54.444	Ciona_savignyi
ENSMOCG00000016660	Rtca	100	92.077	ENSCANG00000040106	RTCA	100	92.077	Colobus_angolensis_palliatus
ENSMOCG00000016660	Rtca	73	97.026	ENSCGRG00001013163	Rtca	85	97.026	Cricetulus_griseus_chok1gshd
ENSMOCG00000016660	Rtca	98	69.722	ENSCSEG00000000530	rtca	96	69.722	Cynoglossus_semilaevis
ENSMOCG00000016660	Rtca	100	58.197	ENSCVAG00000021809	rtca	100	58.197	Cyprinodon_variegatus
ENSMOCG00000016660	Rtca	100	72.131	ENSDARG00000002215	rtca	100	72.131	Danio_rerio
ENSMOCG00000016660	Rtca	100	92.077	ENSDNOG00000000456	RTCA	100	92.077	Dasypus_novemcinctus
ENSMOCG00000016660	Rtca	100	95.355	ENSDORG00000005448	Rtca	100	95.355	Dipodomys_ordii
ENSMOCG00000016660	Rtca	98	38.827	FBgn0025630	Rtca	98	38.827	Drosophila_melanogaster
ENSMOCG00000016660	Rtca	95	56.215	ENSEBUG00000008556	rtca	97	56.215	Eptatretus_burgeri
ENSMOCG00000016660	Rtca	100	92.077	ENSEASG00005015926	RTCA	100	92.077	Equus_asinus_asinus
ENSMOCG00000016660	Rtca	100	92.077	ENSECAG00000019831	RTCA	100	92.077	Equus_caballus
ENSMOCG00000016660	Rtca	91	82.659	ENSEEUG00000001165	RTCA	100	82.659	Erinaceus_europaeus
ENSMOCG00000016660	Rtca	99	72.022	ENSELUG00000003741	rtca	99	72.022	Esox_lucius
ENSMOCG00000016660	Rtca	100	92.896	ENSFCAG00000024460	RTCA	100	92.896	Felis_catus
ENSMOCG00000016660	Rtca	93	82.353	ENSFALG00000002443	RTCA	91	82.353	Ficedula_albicollis
ENSMOCG00000016660	Rtca	100	91.803	ENSFDAG00000012070	-	100	91.803	Fukomys_damarensis
ENSMOCG00000016660	Rtca	98	70.994	ENSFDAG00000016084	-	100	70.994	Fukomys_damarensis
ENSMOCG00000016660	Rtca	72	60.305	ENSFHEG00000002868	rtca	90	69.524	Fundulus_heteroclitus
ENSMOCG00000016660	Rtca	100	69.126	ENSGMOG00000013264	rtca	100	69.126	Gadus_morhua
ENSMOCG00000016660	Rtca	100	82.514	ENSGALG00000005277	RTCA	100	82.514	Gallus_gallus
ENSMOCG00000016660	Rtca	100	69.945	ENSGAFG00000011853	rtca	99	69.945	Gambusia_affinis
ENSMOCG00000016660	Rtca	100	69.126	ENSGACG00000013497	rtca	100	69.126	Gasterosteus_aculeatus
ENSMOCG00000016660	Rtca	80	83.618	ENSGAGG00000023306	RTCA	100	83.618	Gopherus_agassizii
ENSMOCG00000016660	Rtca	100	92.350	ENSGGOG00000009546	-	100	92.350	Gorilla_gorilla
ENSMOCG00000016660	Rtca	100	90.984	ENSGGOG00000044018	-	100	90.984	Gorilla_gorilla
ENSMOCG00000016660	Rtca	100	68.852	ENSHBUG00000002114	rtca	99	68.852	Haplochromis_burtoni
ENSMOCG00000016660	Rtca	100	90.984	ENSHGLG00000002617	RTCA	100	90.984	Heterocephalus_glaber_female
ENSMOCG00000016660	Rtca	100	90.984	ENSHGLG00100006056	RTCA	100	90.984	Heterocephalus_glaber_male
ENSMOCG00000016660	Rtca	100	64.481	ENSHCOG00000020628	rtca	89	64.481	Hippocampus_comes
ENSMOCG00000016660	Rtca	100	71.585	ENSIPUG00000024803	rtca	100	71.585	Ictalurus_punctatus
ENSMOCG00000016660	Rtca	100	85.246	ENSSTOG00000013528	-	100	85.246	Ictidomys_tridecemlineatus
ENSMOCG00000016660	Rtca	100	81.199	ENSSTOG00000033099	-	100	81.199	Ictidomys_tridecemlineatus
ENSMOCG00000016660	Rtca	100	67.486	ENSJJAG00000016178	Rtca	100	67.486	Jaculus_jaculus
ENSMOCG00000016660	Rtca	100	72.404	ENSKMAG00000006651	rtca	99	72.404	Kryptolebias_marmoratus
ENSMOCG00000016660	Rtca	88	69.782	ENSLBEG00000002448	-	99	69.782	Labrus_bergylta
ENSMOCG00000016660	Rtca	99	70.083	ENSLBEG00000028971	rtca	99	70.083	Labrus_bergylta
ENSMOCG00000016660	Rtca	100	78.142	ENSLACG00000013666	RTCA	100	78.142	Latimeria_chalumnae
ENSMOCG00000016660	Rtca	100	72.131	ENSLOCG00000000093	rtca	99	72.131	Lepisosteus_oculatus
ENSMOCG00000016660	Rtca	100	91.257	ENSLAFG00000001473	RTCA	100	91.257	Loxodonta_africana
ENSMOCG00000016660	Rtca	100	92.350	ENSMFAG00000034132	RTCA	100	92.350	Macaca_fascicularis
ENSMOCG00000016660	Rtca	100	91.803	ENSMMUG00000019105	RTCA	100	91.803	Macaca_mulatta
ENSMOCG00000016660	Rtca	84	91.909	ENSMNEG00000037163	RTCA	100	91.909	Macaca_nemestrina
ENSMOCG00000016660	Rtca	100	75.683	ENSMLEG00000042151	RTCA	100	75.683	Mandrillus_leucophaeus
ENSMOCG00000016660	Rtca	100	71.585	ENSMAMG00000016536	rtca	100	71.585	Mastacembelus_armatus
ENSMOCG00000016660	Rtca	100	69.126	ENSMZEG00005017945	rtca	99	69.126	Maylandia_zebra
ENSMOCG00000016660	Rtca	87	81.505	ENSMGAG00000006892	RTCA	99	81.505	Meleagris_gallopavo
ENSMOCG00000016660	Rtca	100	97.268	ENSMAUG00000008488	Rtca	100	97.268	Mesocricetus_auratus
ENSMOCG00000016660	Rtca	84	92.880	ENSMICG00000008643	RTCA	100	92.880	Microcebus_murinus
ENSMOCG00000016660	Rtca	84	71.845	ENSMMOG00000007750	rtca	100	71.845	Mola_mola
ENSMOCG00000016660	Rtca	100	89.071	ENSMODG00000003557	RTCA	100	89.071	Monodelphis_domestica
ENSMOCG00000016660	Rtca	100	71.311	ENSMALG00000020844	rtca	100	71.311	Monopterus_albus
ENSMOCG00000016660	Rtca	100	95.355	MGP_CAROLIEiJ_G0025565	Rtca	100	95.355	Mus_caroli
ENSMOCG00000016660	Rtca	100	94.809	ENSMUSG00000000339	Rtca	100	94.809	Mus_musculus
ENSMOCG00000016660	Rtca	100	95.082	MGP_PahariEiJ_G0027011	Rtca	100	95.082	Mus_pahari
ENSMOCG00000016660	Rtca	100	95.082	MGP_SPRETEiJ_G0026515	Rtca	100	95.082	Mus_spretus
ENSMOCG00000016660	Rtca	100	93.443	ENSMPUG00000012119	RTCA	100	93.443	Mustela_putorius_furo
ENSMOCG00000016660	Rtca	100	86.649	ENSMLUG00000009922	RTCA	100	86.649	Myotis_lucifugus
ENSMOCG00000016660	Rtca	100	94.536	ENSNGAG00000011540	Rtca	99	94.536	Nannospalax_galili
ENSMOCG00000016660	Rtca	100	69.126	ENSNBRG00000003062	rtca	99	69.126	Neolamprologus_brichardi
ENSMOCG00000016660	Rtca	100	91.803	ENSNLEG00000031426	RTCA	100	91.803	Nomascus_leucogenys
ENSMOCG00000016660	Rtca	58	87.805	ENSMEUG00000010030	-	77	78.788	Notamacropus_eugenii
ENSMOCG00000016660	Rtca	73	88.104	ENSOPRG00000012092	RTCA	71	88.104	Ochotona_princeps
ENSMOCG00000016660	Rtca	95	92.816	ENSODEG00000006990	RTCA	96	92.877	Octodon_degus
ENSMOCG00000016660	Rtca	100	68.852	ENSONIG00000007753	rtca	99	68.852	Oreochromis_niloticus
ENSMOCG00000016660	Rtca	87	85.489	ENSOANG00000012055	RTCA	98	85.489	Ornithorhynchus_anatinus
ENSMOCG00000016660	Rtca	100	93.169	ENSOCUG00000014247	RTCA	100	93.169	Oryctolagus_cuniculus
ENSMOCG00000016660	Rtca	100	70.492	ENSORLG00000013605	rtca	100	70.492	Oryzias_latipes
ENSMOCG00000016660	Rtca	100	70.492	ENSORLG00020001904	rtca	100	70.492	Oryzias_latipes_hni
ENSMOCG00000016660	Rtca	100	70.765	ENSORLG00015021064	rtca	100	70.765	Oryzias_latipes_hsok
ENSMOCG00000016660	Rtca	100	70.219	ENSOMEG00000000756	rtca	100	70.219	Oryzias_melastigma
ENSMOCG00000016660	Rtca	100	83.880	ENSOGAG00000005627	RTCA	100	83.880	Otolemur_garnettii
ENSMOCG00000016660	Rtca	87	91.824	ENSOARG00000018122	RTCA	100	91.824	Ovis_aries
ENSMOCG00000016660	Rtca	100	88.918	ENSPPAG00000035119	RTCA	100	91.909	Pan_paniscus
ENSMOCG00000016660	Rtca	100	92.623	ENSPPRG00000000350	RTCA	100	92.623	Panthera_pardus
ENSMOCG00000016660	Rtca	100	92.623	ENSPTIG00000012816	RTCA	100	92.623	Panthera_tigris_altaica
ENSMOCG00000016660	Rtca	100	88.391	ENSPTRG00000001004	RTCA	100	91.262	Pan_troglodytes
ENSMOCG00000016660	Rtca	100	92.350	ENSPANG00000000346	RTCA	100	92.350	Papio_anubis
ENSMOCG00000016660	Rtca	100	73.497	ENSPKIG00000001653	rtca	100	73.497	Paramormyrops_kingsleyae
ENSMOCG00000016660	Rtca	100	82.514	ENSPSIG00000011408	RTCA	100	82.514	Pelodiscus_sinensis
ENSMOCG00000016660	Rtca	100	96.448	ENSPEMG00000018582	Rtca	100	96.448	Peromyscus_maniculatus_bairdii
ENSMOCG00000016660	Rtca	99	58.470	ENSPMAG00000009110	rtca	99	58.470	Petromyzon_marinus
ENSMOCG00000016660	Rtca	100	89.071	ENSPCIG00000007684	RTCA	100	89.071	Phascolarctos_cinereus
ENSMOCG00000016660	Rtca	100	70.300	ENSPFOG00000004824	rtca	100	70.300	Poecilia_formosa
ENSMOCG00000016660	Rtca	100	70.492	ENSPLAG00000011753	rtca	99	70.492	Poecilia_latipinna
ENSMOCG00000016660	Rtca	100	70.492	ENSPMEG00000020469	rtca	99	70.492	Poecilia_mexicana
ENSMOCG00000016660	Rtca	100	71.311	ENSPREG00000001365	rtca	99	71.311	Poecilia_reticulata
ENSMOCG00000016660	Rtca	100	91.803	ENSPPYG00000001115	RTCA	100	91.803	Pongo_abelii
ENSMOCG00000016660	Rtca	100	87.705	ENSPCAG00000005076	RTCA	100	87.705	Procavia_capensis
ENSMOCG00000016660	Rtca	100	93.716	ENSPCOG00000005603	RTCA	100	93.716	Propithecus_coquereli
ENSMOCG00000016660	Rtca	100	88.654	ENSPVAG00000009478	RTCA	100	88.654	Pteropus_vampyrus
ENSMOCG00000016660	Rtca	100	69.126	ENSPNYG00000004722	rtca	99	69.126	Pundamilia_nyererei
ENSMOCG00000016660	Rtca	100	71.858	ENSPNAG00000022270	rtca	100	71.858	Pygocentrus_nattereri
ENSMOCG00000016660	Rtca	100	95.355	ENSRNOG00000014575	Rtca	100	95.355	Rattus_norvegicus
ENSMOCG00000016660	Rtca	100	88.391	ENSRBIG00000041180	RTCA	100	90.939	Rhinopithecus_bieti
ENSMOCG00000016660	Rtca	100	91.530	ENSRROG00000024929	RTCA	100	91.530	Rhinopithecus_roxellana
ENSMOCG00000016660	Rtca	100	91.257	ENSSBOG00000028626	RTCA	100	91.257	Saimiri_boliviensis_boliviensis
ENSMOCG00000016660	Rtca	100	89.617	ENSSHAG00000001758	RTCA	100	89.617	Sarcophilus_harrisii
ENSMOCG00000016660	Rtca	98	68.611	ENSSMAG00000014680	rtca	97	68.611	Scophthalmus_maximus
ENSMOCG00000016660	Rtca	98	70.000	ENSSDUG00000015585	rtca	97	70.000	Seriola_dumerili
ENSMOCG00000016660	Rtca	96	70.370	ENSSLDG00000018985	rtca	95	70.370	Seriola_lalandi_dorsalis
ENSMOCG00000016660	Rtca	87	84.543	ENSSARG00000013993	RTCA	100	84.543	Sorex_araneus
ENSMOCG00000016660	Rtca	100	68.852	ENSSPAG00000011938	rtca	99	68.852	Stegastes_partitus
ENSMOCG00000016660	Rtca	100	93.716	ENSSSCG00000006865	RTCA	100	93.716	Sus_scrofa
ENSMOCG00000016660	Rtca	100	82.787	ENSTGUG00000005154	RTCA	100	82.787	Taeniopygia_guttata
ENSMOCG00000016660	Rtca	100	71.038	ENSTRUG00000008799	rtca	100	71.038	Takifugu_rubripes
ENSMOCG00000016660	Rtca	100	72.131	ENSTNIG00000004725	rtca	100	72.131	Tetraodon_nigroviridis
ENSMOCG00000016660	Rtca	59	80.000	ENSTBEG00000000943	RTCA	82	67.227	Tupaia_belangeri
ENSMOCG00000016660	Rtca	100	88.391	ENSTTRG00000015327	RTCA	100	88.391	Tursiops_truncatus
ENSMOCG00000016660	Rtca	93	90.909	ENSUAMG00000017265	RTCA	96	90.909	Ursus_americanus
ENSMOCG00000016660	Rtca	100	92.350	ENSUMAG00000007881	RTCA	100	92.350	Ursus_maritimus
ENSMOCG00000016660	Rtca	87	82.334	ENSVPAG00000001039	RTCA	84	82.334	Vicugna_pacos
ENSMOCG00000016660	Rtca	100	92.623	ENSVVUG00000022041	RTCA	68	92.623	Vulpes_vulpes
ENSMOCG00000016660	Rtca	99	66.667	ENSXETG00000031661	RTCA	99	66.667	Xenopus_tropicalis
ENSMOCG00000016660	Rtca	100	61.202	ENSXCOG00000008002	rtca	100	61.202	Xiphophorus_couchianus
ENSMOCG00000016660	Rtca	100	70.219	ENSXMAG00000005482	rtca	99	70.219	Xiphophorus_maculatus