EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000016782 (Gene tree)
Gene ID: 101995304
Gene Symbol: Ddx56
Alias: 2600001H07Rik|D11Ertd619e|NOH61
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 7944 bases
Position: chrJH996436.1:13353820-13361763
Accession: 101995304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000018509	ResIII	PF04851.15	3.7e-08	1	1
ENSMOCP00000018509	DEAD	PF00270.29	1.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000022313	-	2016	XM_005366196	ENSMOCP00000018509	546 (aa)	XP_005366253	UPI00038C5F68

Gene Model

Click here to download ENSMOCG00000016782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000016782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000016782	Ddx56	72	31.095	ENSMOCG00000009654	Ddx52	61	30.846
ENSMOCG00000016782	Ddx56	66	30.000	ENSMOCG00000014170	Ddx3x	52	30.000
ENSMOCG00000016782	Ddx56	68	49.180	ENSMOCG00000000257	Ddx1	54	49.180
ENSMOCG00000016782	Ddx56	86	32.484	ENSMOCG00000003693	Ddx47	91	32.627
ENSMOCG00000016782	Ddx56	58	31.771	ENSMOCG00000017297	-	81	31.771
ENSMOCG00000016782	Ddx56	66	30.607	ENSMOCG00000002596	D1Pas1	52	30.239
ENSMOCG00000016782	Ddx56	72	30.673	ENSMOCG00000018690	Ddx49	76	30.175
ENSMOCG00000016782	Ddx56	70	30.175	ENSMOCG00000017220	Ddx19a	73	30.175
ENSMOCG00000016782	Ddx56	67	30.163	ENSMOCG00000019953	-	51	30.163

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000016782	Ddx56	100	91.042	ENSG00000136271	DDX56	100	94.595	Homo_sapiens
ENSMOCG00000016782	Ddx56	98	62.635	ENSAPOG00000017113	ddx56	98	62.996	Acanthochromis_polyacanthus
ENSMOCG00000016782	Ddx56	100	88.278	ENSAMEG00000017711	DDX56	100	88.278	Ailuropoda_melanoleuca
ENSMOCG00000016782	Ddx56	92	58.546	ENSACIG00000013747	ddx56	98	66.851	Amphilophus_citrinellus
ENSMOCG00000016782	Ddx56	88	65.503	ENSAOCG00000015447	-	87	65.503	Amphiprion_ocellaris
ENSMOCG00000016782	Ddx56	97	62.338	ENSAOCG00000018059	ddx56	93	65.800	Amphiprion_ocellaris
ENSMOCG00000016782	Ddx56	99	62.724	ENSAPEG00000007267	ddx56	99	62.724	Amphiprion_percula
ENSMOCG00000016782	Ddx56	98	63.587	ENSATEG00000005279	ddx56	98	63.884	Anabas_testudineus
ENSMOCG00000016782	Ddx56	98	62.455	ENSACLG00000020113	ddx56	98	63.406	Astatotilapia_calliptera
ENSMOCG00000016782	Ddx56	98	60.180	ENSAMXG00000019357	ddx56	99	61.622	Astyanax_mexicanus
ENSMOCG00000016782	Ddx56	100	90.476	ENSBTAG00000010602	DDX56	100	90.476	Bos_taurus
ENSMOCG00000016782	Ddx56	98	40.497	WBGene00016073	C24H12.4	86	40.497	Caenorhabditis_elegans
ENSMOCG00000016782	Ddx56	100	90.128	ENSCJAG00000012233	DDX56	100	90.128	Callithrix_jacchus
ENSMOCG00000016782	Ddx56	82	86.771	ENSCAFG00000029295	DDX56	100	86.771	Canis_familiaris
ENSMOCG00000016782	Ddx56	100	84.615	ENSCAFG00020019695	DDX56	100	84.615	Canis_lupus_dingo
ENSMOCG00000016782	Ddx56	100	90.476	ENSCHIG00000014261	DDX56	100	90.476	Capra_hircus
ENSMOCG00000016782	Ddx56	100	90.128	ENSTSYG00000008048	DDX56	100	90.676	Carlito_syrichta
ENSMOCG00000016782	Ddx56	86	87.315	ENSCAPG00000006286	DDX56	100	87.104	Cavia_aperea
ENSMOCG00000016782	Ddx56	100	88.117	ENSCPOG00000003359	DDX56	100	87.934	Cavia_porcellus
ENSMOCG00000016782	Ddx56	100	89.214	ENSCCAG00000025303	DDX56	100	89.945	Cebus_capucinus
ENSMOCG00000016782	Ddx56	100	91.026	ENSCATG00000039389	DDX56	100	91.026	Cercocebus_atys
ENSMOCG00000016782	Ddx56	100	89.927	ENSCLAG00000007666	DDX56	100	89.927	Chinchilla_lanigera
ENSMOCG00000016782	Ddx56	100	91.042	ENSCSAG00000015636	DDX56	100	91.042	Chlorocebus_sabaeus
ENSMOCG00000016782	Ddx56	98	69.174	ENSCPBG00000024556	DDX56	97	68.807	Chrysemys_picta_bellii
ENSMOCG00000016782	Ddx56	92	55.796	ENSCING00000005185	-	98	55.992	Ciona_intestinalis
ENSMOCG00000016782	Ddx56	91	54.059	ENSCSAVG00000011266	-	99	54.059	Ciona_savignyi
ENSMOCG00000016782	Ddx56	100	90.859	ENSCANG00000028187	DDX56	100	90.859	Colobus_angolensis_palliatus
ENSMOCG00000016782	Ddx56	100	95.604	ENSCGRG00001019019	Ddx56	100	95.604	Cricetulus_griseus_chok1gshd
ENSMOCG00000016782	Ddx56	100	95.604	ENSCGRG00000011870	Ddx56	100	95.604	Cricetulus_griseus_crigri
ENSMOCG00000016782	Ddx56	98	64.107	ENSCSEG00000008368	ddx56	99	63.929	Cynoglossus_semilaevis
ENSMOCG00000016782	Ddx56	98	63.158	ENSCVAG00000006499	ddx56	98	64.065	Cyprinodon_variegatus
ENSMOCG00000016782	Ddx56	99	62.970	ENSDARG00000020913	ddx56	99	64.057	Danio_rerio
ENSMOCG00000016782	Ddx56	86	85.805	ENSDNOG00000036526	DDX56	99	85.805	Dasypus_novemcinctus
ENSMOCG00000016782	Ddx56	92	49.803	FBgn0001565	Hlc	90	49.803	Drosophila_melanogaster
ENSMOCG00000016782	Ddx56	83	77.833	ENSETEG00000002969	-	74	77.833	Echinops_telfairi
ENSMOCG00000016782	Ddx56	87	59.579	ENSETEG00000019559	-	100	58.737	Echinops_telfairi
ENSMOCG00000016782	Ddx56	98	57.658	ENSEBUG00000009986	ddx56	99	58.378	Eptatretus_burgeri
ENSMOCG00000016782	Ddx56	100	90.842	ENSEASG00005017795	DDX56	100	90.842	Equus_asinus_asinus
ENSMOCG00000016782	Ddx56	100	90.659	ENSECAG00000019897	DDX56	100	90.659	Equus_caballus
ENSMOCG00000016782	Ddx56	86	88.771	ENSEEUG00000004849	DDX56	100	88.771	Erinaceus_europaeus
ENSMOCG00000016782	Ddx56	97	65.138	ENSELUG00000004150	ddx56	97	66.052	Esox_lucius
ENSMOCG00000016782	Ddx56	99	88.073	ENSFCAG00000010261	DDX56	99	88.440	Felis_catus
ENSMOCG00000016782	Ddx56	100	89.194	ENSFDAG00000007128	DDX56	100	89.194	Fukomys_damarensis
ENSMOCG00000016782	Ddx56	98	63.636	ENSFHEG00000018008	ddx56	95	67.475	Fundulus_heteroclitus
ENSMOCG00000016782	Ddx56	97	61.754	ENSGAFG00000006906	ddx56	93	64.789	Gambusia_affinis
ENSMOCG00000016782	Ddx56	95	70.532	ENSGAGG00000006789	DDX56	91	71.345	Gopherus_agassizii
ENSMOCG00000016782	Ddx56	100	91.042	ENSGGOG00000012031	DDX56	100	91.042	Gorilla_gorilla
ENSMOCG00000016782	Ddx56	92	60.861	ENSHBUG00000015246	ddx56	93	60.962	Haplochromis_burtoni
ENSMOCG00000016782	Ddx56	100	89.744	ENSHGLG00000017271	DDX56	100	89.744	Heterocephalus_glaber_female
ENSMOCG00000016782	Ddx56	100	89.744	ENSHGLG00100015731	DDX56	100	89.744	Heterocephalus_glaber_male
ENSMOCG00000016782	Ddx56	97	63.352	ENSHCOG00000001685	ddx56	97	63.352	Hippocampus_comes
ENSMOCG00000016782	Ddx56	99	61.744	ENSIPUG00000006602	ddx56	98	61.566	Ictalurus_punctatus
ENSMOCG00000016782	Ddx56	100	89.560	ENSSTOG00000000464	DDX56	100	89.560	Ictidomys_tridecemlineatus
ENSMOCG00000016782	Ddx56	99	90.775	ENSJJAG00000014269	Ddx56	100	90.775	Jaculus_jaculus
ENSMOCG00000016782	Ddx56	98	63.472	ENSKMAG00000016611	ddx56	98	63.834	Kryptolebias_marmoratus
ENSMOCG00000016782	Ddx56	98	62.289	ENSLBEG00000026281	ddx56	98	62.862	Labrus_bergylta
ENSMOCG00000016782	Ddx56	97	67.219	ENSLACG00000015551	DDX56	96	67.582	Latimeria_chalumnae
ENSMOCG00000016782	Ddx56	99	62.898	ENSLOCG00000015185	ddx56	99	63.214	Lepisosteus_oculatus
ENSMOCG00000016782	Ddx56	99	88.376	ENSLAFG00000018206	DDX56	99	88.007	Loxodonta_africana
ENSMOCG00000016782	Ddx56	100	91.209	ENSMFAG00000041001	DDX56	100	91.209	Macaca_fascicularis
ENSMOCG00000016782	Ddx56	100	91.026	ENSMMUG00000002645	DDX56	100	91.026	Macaca_mulatta
ENSMOCG00000016782	Ddx56	100	91.209	ENSMNEG00000028492	DDX56	100	91.209	Macaca_nemestrina
ENSMOCG00000016782	Ddx56	100	91.026	ENSMLEG00000043591	DDX56	100	91.026	Mandrillus_leucophaeus
ENSMOCG00000016782	Ddx56	97	63.206	ENSMAMG00000007776	ddx56	97	64.771	Mastacembelus_armatus
ENSMOCG00000016782	Ddx56	98	62.455	ENSMZEG00005009813	ddx56	98	63.406	Maylandia_zebra
ENSMOCG00000016782	Ddx56	100	90.494	ENSMICG00000005550	DDX56	100	90.494	Microcebus_murinus
ENSMOCG00000016782	Ddx56	90	67.000	ENSMMOG00000009654	ddx56	94	67.600	Mola_mola
ENSMOCG00000016782	Ddx56	100	73.913	ENSMODG00000016137	DDX56	100	73.913	Monodelphis_domestica
ENSMOCG00000016782	Ddx56	68	63.807	ENSMALG00000016910	ddx56	99	63.807	Monopterus_albus
ENSMOCG00000016782	Ddx56	100	94.139	MGP_CAROLIEiJ_G0016069	Ddx56	100	94.139	Mus_caroli
ENSMOCG00000016782	Ddx56	100	93.956	ENSMUSG00000004393	Ddx56	100	93.956	Mus_musculus
ENSMOCG00000016782	Ddx56	100	94.689	MGP_PahariEiJ_G0016822	Ddx56	100	94.689	Mus_pahari
ENSMOCG00000016782	Ddx56	100	93.956	MGP_SPRETEiJ_G0016911	Ddx56	100	93.956	Mus_spretus
ENSMOCG00000016782	Ddx56	100	87.179	ENSMPUG00000018196	DDX56	88	87.179	Mustela_putorius_furo
ENSMOCG00000016782	Ddx56	100	89.377	ENSMLUG00000003509	DDX56	100	89.560	Myotis_lucifugus
ENSMOCG00000016782	Ddx56	100	91.758	ENSNGAG00000018785	Ddx56	100	91.758	Nannospalax_galili
ENSMOCG00000016782	Ddx56	92	63.294	ENSNBRG00000002656	ddx56	93	62.963	Neolamprologus_brichardi
ENSMOCG00000016782	Ddx56	100	91.590	ENSNLEG00000003816	DDX56	100	91.590	Nomascus_leucogenys
ENSMOCG00000016782	Ddx56	91	76.008	ENSMEUG00000006788	DDX56	100	76.008	Notamacropus_eugenii
ENSMOCG00000016782	Ddx56	100	87.751	ENSOPRG00000000292	-	100	87.751	Ochotona_princeps
ENSMOCG00000016782	Ddx56	69	93.600	ENSODEG00000014807	DDX56	100	93.600	Octodon_degus
ENSMOCG00000016782	Ddx56	98	64.991	ENSONIG00000011509	ddx56	98	64.815	Oreochromis_niloticus
ENSMOCG00000016782	Ddx56	74	69.479	ENSOANG00000015987	-	95	69.479	Ornithorhynchus_anatinus
ENSMOCG00000016782	Ddx56	97	67.216	ENSOANG00000006320	-	100	69.794	Ornithorhynchus_anatinus
ENSMOCG00000016782	Ddx56	100	86.837	ENSOCUG00000022918	DDX56	100	87.751	Oryctolagus_cuniculus
ENSMOCG00000016782	Ddx56	99	63.978	ENSORLG00000001434	ddx56	99	63.978	Oryzias_latipes
ENSMOCG00000016782	Ddx56	98	64.312	ENSORLG00020015718	ddx56	95	64.312	Oryzias_latipes_hni
ENSMOCG00000016782	Ddx56	98	64.663	ENSORLG00015003004	ddx56	95	64.144	Oryzias_latipes_hsok
ENSMOCG00000016782	Ddx56	98	63.884	ENSOMEG00000022072	ddx56	98	64.610	Oryzias_melastigma
ENSMOCG00000016782	Ddx56	100	89.580	ENSOGAG00000009981	DDX56	100	89.580	Otolemur_garnettii
ENSMOCG00000016782	Ddx56	100	90.659	ENSOARG00000015240	DDX56	100	90.659	Ovis_aries
ENSMOCG00000016782	Ddx56	100	87.050	ENSPPAG00000029147	DDX56	100	87.050	Pan_paniscus
ENSMOCG00000016782	Ddx56	100	73.224	ENSPPAG00000031263	-	100	73.042	Pan_paniscus
ENSMOCG00000016782	Ddx56	99	86.813	ENSPPRG00000014594	DDX56	99	87.546	Panthera_pardus
ENSMOCG00000016782	Ddx56	86	85.138	ENSPTIG00000019500	DDX56	92	85.563	Panthera_tigris_altaica
ENSMOCG00000016782	Ddx56	94	74.903	ENSPTRG00000052765	-	100	74.710	Pan_troglodytes
ENSMOCG00000016782	Ddx56	100	90.676	ENSPTRG00000019147	DDX56	100	90.676	Pan_troglodytes
ENSMOCG00000016782	Ddx56	100	91.026	ENSPANG00000002446	DDX56	100	91.026	Papio_anubis
ENSMOCG00000016782	Ddx56	98	65.217	ENSPKIG00000018998	ddx56	98	64.312	Paramormyrops_kingsleyae
ENSMOCG00000016782	Ddx56	96	63.873	ENSPMGG00000017421	ddx56	96	65.251	Periophthalmus_magnuspinnatus
ENSMOCG00000016782	Ddx56	100	82.065	ENSPCIG00000009336	DDX56	100	82.065	Phascolarctos_cinereus
ENSMOCG00000016782	Ddx56	97	63.553	ENSPFOG00000018658	ddx56	97	63.736	Poecilia_formosa
ENSMOCG00000016782	Ddx56	97	63.553	ENSPLAG00000019208	ddx56	97	63.736	Poecilia_latipinna
ENSMOCG00000016782	Ddx56	97	63.553	ENSPMEG00000001775	ddx56	97	63.736	Poecilia_mexicana
ENSMOCG00000016782	Ddx56	97	63.822	ENSPREG00000015142	ddx56	97	64.103	Poecilia_reticulata
ENSMOCG00000016782	Ddx56	100	91.590	ENSPPYG00000017591	DDX56	100	91.590	Pongo_abelii
ENSMOCG00000016782	Ddx56	96	88.046	ENSPCAG00000011499	DDX56	100	87.856	Procavia_capensis
ENSMOCG00000016782	Ddx56	100	90.311	ENSPCOG00000024864	DDX56	100	90.128	Propithecus_coquereli
ENSMOCG00000016782	Ddx56	88	93.023	ENSPVAG00000000791	DDX56	88	93.023	Pteropus_vampyrus
ENSMOCG00000016782	Ddx56	98	62.274	ENSPNYG00000019212	ddx56	98	63.225	Pundamilia_nyererei
ENSMOCG00000016782	Ddx56	98	63.383	ENSPNAG00000025446	ddx56	99	63.538	Pygocentrus_nattereri
ENSMOCG00000016782	Ddx56	100	95.055	ENSRNOG00000004670	Ddx56	100	95.055	Rattus_norvegicus
ENSMOCG00000016782	Ddx56	100	91.042	ENSRBIG00000030140	DDX56	100	91.042	Rhinopithecus_bieti
ENSMOCG00000016782	Ddx56	100	90.676	ENSRROG00000044428	DDX56	100	90.676	Rhinopithecus_roxellana
ENSMOCG00000016782	Ddx56	97	42.612	YLR276C	-	91	43.646	Saccharomyces_cerevisiae
ENSMOCG00000016782	Ddx56	100	90.128	ENSSBOG00000034339	DDX56	100	90.128	Saimiri_boliviensis_boliviensis
ENSMOCG00000016782	Ddx56	86	81.780	ENSSHAG00000016615	DDX56	99	81.780	Sarcophilus_harrisii
ENSMOCG00000016782	Ddx56	98	65.693	ENSSFOG00015012795	ddx56	97	65.693	Scleropages_formosus
ENSMOCG00000016782	Ddx56	98	62.791	ENSSMAG00000011280	ddx56	99	63.148	Scophthalmus_maximus
ENSMOCG00000016782	Ddx56	98	62.523	ENSSDUG00000023597	ddx56	98	63.423	Seriola_dumerili
ENSMOCG00000016782	Ddx56	98	62.523	ENSSLDG00000018369	ddx56	98	63.423	Seriola_lalandi_dorsalis
ENSMOCG00000016782	Ddx56	75	87.106	ENSSARG00000014363	DDX56	79	85.596	Sorex_araneus
ENSMOCG00000016782	Ddx56	99	67.093	ENSSPUG00000000784	DDX56	96	66.910	Sphenodon_punctatus
ENSMOCG00000016782	Ddx56	92	65.949	ENSSPAG00000009392	ddx56	95	66.344	Stegastes_partitus
ENSMOCG00000016782	Ddx56	100	89.781	ENSSSCG00000016745	DDX56	100	89.781	Sus_scrofa
ENSMOCG00000016782	Ddx56	99	63.168	ENSTRUG00000018623	ddx56	99	63.168	Takifugu_rubripes
ENSMOCG00000016782	Ddx56	98	60.993	ENSTNIG00000013593	ddx56	98	61.717	Tetraodon_nigroviridis
ENSMOCG00000016782	Ddx56	100	88.645	ENSTBEG00000007119	DDX56	100	88.645	Tupaia_belangeri
ENSMOCG00000016782	Ddx56	86	88.559	ENSTTRG00000010552	DDX56	100	88.559	Tursiops_truncatus
ENSMOCG00000016782	Ddx56	100	88.645	ENSUAMG00000014194	DDX56	100	88.645	Ursus_americanus
ENSMOCG00000016782	Ddx56	100	88.645	ENSUMAG00000009666	DDX56	100	88.645	Ursus_maritimus
ENSMOCG00000016782	Ddx56	100	87.179	ENSVVUG00000011905	DDX56	100	87.179	Vulpes_vulpes
ENSMOCG00000016782	Ddx56	98	64.376	ENSXETG00000019000	ddx56	99	65.461	Xenopus_tropicalis
ENSMOCG00000016782	Ddx56	97	62.900	ENSXCOG00000017413	ddx56	97	62.712	Xiphophorus_couchianus
ENSMOCG00000016782	Ddx56	97	63.486	ENSXMAG00000018749	ddx56	97	63.486	Xiphophorus_maculatus