EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000016838 (Gene tree)
Gene ID: 101991439
Gene Symbol: Prpf8
Alias: D11Bwg0410e|DBF3/PRP8|Prp8|Sfprp8l
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 25941 bases
Position: chr7:23622006-23647946
Accession: 101991439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000018592	RRM_4	PF10598.9	3.1e-48	1	1
ENSMOCP00000018592	U5_2-snRNA_bdg	PF10597.9	6.1e-74	1	1
ENSMOCP00000018592	PRO8NT	PF08082.11	1.2e-86	1	1
ENSMOCP00000018592	U6-snRNA_bdg	PF10596.9	1.5e-89	1	1
ENSMOCP00000018592	PROCN	PF08083.11	1.6e-235	1	1
ENSMOCP00000018592	PRP8_domainIV	PF12134.8	3.2e-130	1	1
ENSMOCP00000018592	PROCT	PF08084.11	1.3e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000022397	-	7256	XM_005349550	ENSMOCP00000018592	2335 (aa)	XP_005349607	UPI00032B025E

Gene Model

Click here to download ENSMOCG00000016838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000016838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000016838	Prpf8	100	99.957	ENSG00000174231	PRPF8	100	99.957	Homo_sapiens
ENSMOCG00000016838	Prpf8	100	97.820	ENSAPOG00000010079	prpf8	100	97.820	Acanthochromis_polyacanthus
ENSMOCG00000016838	Prpf8	100	99.957	ENSAMEG00000007940	PRPF8	100	99.957	Ailuropoda_melanoleuca
ENSMOCG00000016838	Prpf8	100	95.549	ENSACIG00000018280	prpf8	100	95.925	Amphilophus_citrinellus
ENSMOCG00000016838	Prpf8	100	97.820	ENSAOCG00000010725	prpf8	100	97.820	Amphiprion_ocellaris
ENSMOCG00000016838	Prpf8	100	97.820	ENSAPEG00000014397	prpf8	100	97.820	Amphiprion_percula
ENSMOCG00000016838	Prpf8	100	97.263	ENSATEG00000010062	prpf8	100	97.263	Anabas_testudineus
ENSMOCG00000016838	Prpf8	96	99.511	ENSAPLG00000010357	PRPF8	100	99.511	Anas_platyrhynchos
ENSMOCG00000016838	Prpf8	83	97.477	ENSACAG00000014784	PRPF8	99	97.477	Anolis_carolinensis
ENSMOCG00000016838	Prpf8	100	99.957	ENSANAG00000032629	PRPF8	100	99.957	Aotus_nancymaae
ENSMOCG00000016838	Prpf8	100	97.447	ENSACLG00000020858	prpf8	100	97.447	Astatotilapia_calliptera
ENSMOCG00000016838	Prpf8	100	97.731	ENSAMXG00000020291	prpf8	100	97.731	Astyanax_mexicanus
ENSMOCG00000016838	Prpf8	100	99.957	ENSBTAG00000011488	PRPF8	100	99.957	Bos_taurus
ENSMOCG00000016838	Prpf8	99	86.444	WBGene00004187	prp-8	99	86.529	Caenorhabditis_elegans
ENSMOCG00000016838	Prpf8	100	99.957	ENSCJAG00000001911	PRPF8	100	99.957	Callithrix_jacchus
ENSMOCG00000016838	Prpf8	100	99.957	ENSCAFG00000019221	PRPF8	100	99.957	Canis_familiaris
ENSMOCG00000016838	Prpf8	96	99.955	ENSCAFG00020009943	PRPF8	100	99.955	Canis_lupus_dingo
ENSMOCG00000016838	Prpf8	100	99.957	ENSCHIG00000017499	PRPF8	100	99.957	Capra_hircus
ENSMOCG00000016838	Prpf8	100	99.957	ENSTSYG00000014120	PRPF8	100	99.957	Carlito_syrichta
ENSMOCG00000016838	Prpf8	96	97.728	ENSCAPG00000009459	PRPF8	99	97.728	Cavia_aperea
ENSMOCG00000016838	Prpf8	100	99.957	ENSCPOG00000010379	PRPF8	100	99.957	Cavia_porcellus
ENSMOCG00000016838	Prpf8	100	99.957	ENSCCAG00000031983	-	100	99.957	Cebus_capucinus
ENSMOCG00000016838	Prpf8	100	99.957	ENSCATG00000038595	PRPF8	100	99.957	Cercocebus_atys
ENSMOCG00000016838	Prpf8	100	99.957	ENSCLAG00000004388	PRPF8	100	99.957	Chinchilla_lanigera
ENSMOCG00000016838	Prpf8	100	99.957	ENSCSAG00000013929	PRPF8	100	99.957	Chlorocebus_sabaeus
ENSMOCG00000016838	Prpf8	81	99.738	ENSCHOG00000008590	PRPF8	88	99.738	Choloepus_hoffmanni
ENSMOCG00000016838	Prpf8	100	99.486	ENSCPBG00000020409	PRPF8	100	99.486	Chrysemys_picta_bellii
ENSMOCG00000016838	Prpf8	99	92.874	ENSCSAVG00000007825	-	100	91.280	Ciona_savignyi
ENSMOCG00000016838	Prpf8	100	99.957	ENSCANG00000043088	PRPF8	100	99.957	Colobus_angolensis_palliatus
ENSMOCG00000016838	Prpf8	74	99.533	ENSCGRG00000005129	Prpf8	100	99.533	Cricetulus_griseus_crigri
ENSMOCG00000016838	Prpf8	100	97.649	ENSCSEG00000007905	prpf8	100	97.649	Cynoglossus_semilaevis
ENSMOCG00000016838	Prpf8	100	97.609	ENSDARG00000026180	prpf8	100	97.609	Danio_rerio
ENSMOCG00000016838	Prpf8	93	99.908	ENSDNOG00000018471	PRPF8	99	99.908	Dasypus_novemcinctus
ENSMOCG00000016838	Prpf8	84	99.432	ENSDORG00000006185	Prpf8	96	99.432	Dipodomys_ordii
ENSMOCG00000016838	Prpf8	99	91.549	FBgn0033688	Prp8	98	91.122	Drosophila_melanogaster
ENSMOCG00000016838	Prpf8	100	94.475	ENSETEG00000017592	PRPF8	100	94.475	Echinops_telfairi
ENSMOCG00000016838	Prpf8	99	93.729	ENSEBUG00000006548	prpf8	99	93.729	Eptatretus_burgeri
ENSMOCG00000016838	Prpf8	100	99.957	ENSEASG00005009514	PRPF8	100	99.957	Equus_asinus_asinus
ENSMOCG00000016838	Prpf8	97	99.956	ENSECAG00000021318	PRPF8	100	99.956	Equus_caballus
ENSMOCG00000016838	Prpf8	67	100.000	ENSEEUG00000012120	-	67	100.000	Erinaceus_europaeus
ENSMOCG00000016838	Prpf8	98	96.547	ENSELUG00000007120	prpf8	99	96.547	Esox_lucius
ENSMOCG00000016838	Prpf8	100	99.957	ENSFCAG00000006297	PRPF8	100	99.957	Felis_catus
ENSMOCG00000016838	Prpf8	100	99.443	ENSFALG00000006628	PRPF8	100	99.443	Ficedula_albicollis
ENSMOCG00000016838	Prpf8	100	99.957	ENSFDAG00000004711	PRPF8	100	99.957	Fukomys_damarensis
ENSMOCG00000016838	Prpf8	100	97.438	ENSFHEG00000021084	prpf8	100	97.438	Fundulus_heteroclitus
ENSMOCG00000016838	Prpf8	100	95.389	ENSGMOG00000002028	prpf8	99	95.389	Gadus_morhua
ENSMOCG00000016838	Prpf8	100	99.400	ENSGALG00000002943	PRPF8	100	99.400	Gallus_gallus
ENSMOCG00000016838	Prpf8	99	97.520	ENSGAFG00000010337	prpf8	99	97.520	Gambusia_affinis
ENSMOCG00000016838	Prpf8	100	97.516	ENSGACG00000008504	prpf8	100	97.516	Gasterosteus_aculeatus
ENSMOCG00000016838	Prpf8	100	99.486	ENSGAGG00000008350	PRPF8	100	99.486	Gopherus_agassizii
ENSMOCG00000016838	Prpf8	100	99.957	ENSGGOG00000005516	PRPF8	100	99.957	Gorilla_gorilla
ENSMOCG00000016838	Prpf8	100	97.604	ENSHBUG00000016192	prpf8	100	97.604	Haplochromis_burtoni
ENSMOCG00000016838	Prpf8	100	99.957	ENSHGLG00000012029	PRPF8	100	99.957	Heterocephalus_glaber_female
ENSMOCG00000016838	Prpf8	100	99.957	ENSHGLG00100016494	PRPF8	100	99.957	Heterocephalus_glaber_male
ENSMOCG00000016838	Prpf8	100	97.563	ENSHCOG00000016414	prpf8	100	97.563	Hippocampus_comes
ENSMOCG00000016838	Prpf8	100	97.605	ENSIPUG00000023230	prpf8	100	97.605	Ictalurus_punctatus
ENSMOCG00000016838	Prpf8	100	99.957	ENSSTOG00000005128	PRPF8	100	99.957	Ictidomys_tridecemlineatus
ENSMOCG00000016838	Prpf8	100	97.859	ENSJJAG00000021159	Prpf8	100	97.859	Jaculus_jaculus
ENSMOCG00000016838	Prpf8	99	97.977	ENSKMAG00000016118	prpf8	99	97.977	Kryptolebias_marmoratus
ENSMOCG00000016838	Prpf8	100	97.478	ENSLBEG00000026903	prpf8	100	97.478	Labrus_bergylta
ENSMOCG00000016838	Prpf8	95	96.072	ENSLACG00000010479	PRPF8	99	98.551	Latimeria_chalumnae
ENSMOCG00000016838	Prpf8	99	97.731	ENSLOCG00000005409	prpf8	99	97.731	Lepisosteus_oculatus
ENSMOCG00000016838	Prpf8	100	99.957	ENSLAFG00000015445	PRPF8	100	99.957	Loxodonta_africana
ENSMOCG00000016838	Prpf8	100	99.957	ENSMFAG00000039995	PRPF8	100	99.957	Macaca_fascicularis
ENSMOCG00000016838	Prpf8	100	99.957	ENSMMUG00000004820	PRPF8	100	99.957	Macaca_mulatta
ENSMOCG00000016838	Prpf8	100	99.957	ENSMNEG00000035713	PRPF8	100	99.957	Macaca_nemestrina
ENSMOCG00000016838	Prpf8	100	99.957	ENSMLEG00000037937	PRPF8	100	99.957	Mandrillus_leucophaeus
ENSMOCG00000016838	Prpf8	100	97.776	ENSMAMG00000008919	prpf8	100	97.776	Mastacembelus_armatus
ENSMOCG00000016838	Prpf8	100	97.447	ENSMZEG00005015073	prpf8	100	97.447	Maylandia_zebra
ENSMOCG00000016838	Prpf8	100	99.400	ENSMGAG00000004769	PRPF8	100	99.400	Meleagris_gallopavo
ENSMOCG00000016838	Prpf8	100	100.000	ENSMICG00000010320	PRPF8	100	100.000	Microcebus_murinus
ENSMOCG00000016838	Prpf8	100	97.305	ENSMMOG00000011887	prpf8	100	97.305	Mola_mola
ENSMOCG00000016838	Prpf8	100	99.786	ENSMODG00000010480	PRPF8	100	99.786	Monodelphis_domestica
ENSMOCG00000016838	Prpf8	97	97.713	ENSMALG00000003558	prpf8	100	97.713	Monopterus_albus
ENSMOCG00000016838	Prpf8	100	99.957	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.957	Mus_caroli
ENSMOCG00000016838	Prpf8	100	99.957	ENSMUSG00000020850	Prpf8	100	99.957	Mus_musculus
ENSMOCG00000016838	Prpf8	100	99.872	MGP_PahariEiJ_G0017877	Prpf8	100	99.872	Mus_pahari
ENSMOCG00000016838	Prpf8	100	99.957	MGP_SPRETEiJ_G0017583	Prpf8	100	99.957	Mus_spretus
ENSMOCG00000016838	Prpf8	100	99.957	ENSMPUG00000013227	PRPF8	100	99.957	Mustela_putorius_furo
ENSMOCG00000016838	Prpf8	100	99.786	ENSMLUG00000002666	PRPF8	100	99.786	Myotis_lucifugus
ENSMOCG00000016838	Prpf8	100	98.244	ENSNGAG00000005305	Prpf8	100	98.244	Nannospalax_galili
ENSMOCG00000016838	Prpf8	100	97.489	ENSNBRG00000013127	prpf8	100	97.489	Neolamprologus_brichardi
ENSMOCG00000016838	Prpf8	97	97.632	ENSNLEG00000000897	PRPF8	98	97.632	Nomascus_leucogenys
ENSMOCG00000016838	Prpf8	99	98.001	ENSMEUG00000015999	PRPF8	100	98.001	Notamacropus_eugenii
ENSMOCG00000016838	Prpf8	100	98.501	ENSOPRG00000003102	PRPF8	100	98.501	Ochotona_princeps
ENSMOCG00000016838	Prpf8	100	99.957	ENSODEG00000008468	PRPF8	100	99.957	Octodon_degus
ENSMOCG00000016838	Prpf8	100	97.490	ENSONIG00000008153	prpf8	100	97.490	Oreochromis_niloticus
ENSMOCG00000016838	Prpf8	82	99.645	ENSOANG00000004250	PRPF8	97	99.645	Ornithorhynchus_anatinus
ENSMOCG00000016838	Prpf8	100	99.957	ENSOCUG00000000081	PRPF8	100	99.957	Oryctolagus_cuniculus
ENSMOCG00000016838	Prpf8	99	97.687	ENSORLG00000008036	prpf8	99	97.687	Oryzias_latipes
ENSMOCG00000016838	Prpf8	99	97.646	ENSORLG00020021070	prpf8	99	97.646	Oryzias_latipes_hni
ENSMOCG00000016838	Prpf8	99	97.687	ENSORLG00015002340	prpf8	99	97.687	Oryzias_latipes_hsok
ENSMOCG00000016838	Prpf8	99	96.187	ENSOMEG00000016866	prpf8	99	96.187	Oryzias_melastigma
ENSMOCG00000016838	Prpf8	100	99.829	ENSOARG00000013312	PRPF8	100	99.829	Ovis_aries
ENSMOCG00000016838	Prpf8	100	99.957	ENSPPAG00000042753	PRPF8	100	99.957	Pan_paniscus
ENSMOCG00000016838	Prpf8	100	99.957	ENSPPRG00000008746	PRPF8	100	99.957	Panthera_pardus
ENSMOCG00000016838	Prpf8	100	99.872	ENSPTIG00000019200	PRPF8	100	99.872	Panthera_tigris_altaica
ENSMOCG00000016838	Prpf8	100	99.957	ENSPTRG00000039576	PRPF8	100	99.957	Pan_troglodytes
ENSMOCG00000016838	Prpf8	99	99.014	ENSPANG00000024607	PRPF8	99	99.014	Papio_anubis
ENSMOCG00000016838	Prpf8	100	97.319	ENSPKIG00000011201	prpf8	100	97.319	Paramormyrops_kingsleyae
ENSMOCG00000016838	Prpf8	100	99.443	ENSPSIG00000013393	PRPF8	100	99.443	Pelodiscus_sinensis
ENSMOCG00000016838	Prpf8	100	100.000	ENSPEMG00000021699	Prpf8	100	100.000	Peromyscus_maniculatus_bairdii
ENSMOCG00000016838	Prpf8	96	93.853	ENSPMAG00000005438	prpf8	100	93.898	Petromyzon_marinus
ENSMOCG00000016838	Prpf8	100	99.786	ENSPCIG00000022603	PRPF8	100	99.822	Phascolarctos_cinereus
ENSMOCG00000016838	Prpf8	100	96.990	ENSPFOG00000007005	prpf8	100	96.990	Poecilia_formosa
ENSMOCG00000016838	Prpf8	100	96.403	ENSPLAG00000020777	prpf8	100	96.403	Poecilia_latipinna
ENSMOCG00000016838	Prpf8	100	96.990	ENSPMEG00000004051	prpf8	100	96.990	Poecilia_mexicana
ENSMOCG00000016838	Prpf8	100	97.645	ENSPREG00000021902	prpf8	100	97.645	Poecilia_reticulata
ENSMOCG00000016838	Prpf8	100	99.957	ENSPPYG00000007777	PRPF8	100	99.957	Pongo_abelii
ENSMOCG00000016838	Prpf8	90	99.647	ENSPCAG00000008938	PRPF8	90	99.647	Procavia_capensis
ENSMOCG00000016838	Prpf8	100	100.000	ENSPCOG00000015182	PRPF8	100	100.000	Propithecus_coquereli
ENSMOCG00000016838	Prpf8	93	100.000	ENSPVAG00000002134	PRPF8	93	100.000	Pteropus_vampyrus
ENSMOCG00000016838	Prpf8	100	97.604	ENSPNYG00000016356	prpf8	100	97.604	Pundamilia_nyererei
ENSMOCG00000016838	Prpf8	100	97.648	ENSPNAG00000009247	prpf8	100	97.648	Pygocentrus_nattereri
ENSMOCG00000016838	Prpf8	100	99.957	ENSRNOG00000003495	Prpf8	100	99.957	Rattus_norvegicus
ENSMOCG00000016838	Prpf8	100	99.957	ENSRBIG00000031219	PRPF8	100	99.957	Rhinopithecus_bieti
ENSMOCG00000016838	Prpf8	100	99.957	ENSRROG00000038014	PRPF8	100	99.957	Rhinopithecus_roxellana
ENSMOCG00000016838	Prpf8	99	62.430	YHR165C	PRP8	95	62.484	Saccharomyces_cerevisiae
ENSMOCG00000016838	Prpf8	100	99.957	ENSSBOG00000029717	PRPF8	100	99.957	Saimiri_boliviensis_boliviensis
ENSMOCG00000016838	Prpf8	100	99.743	ENSSHAG00000006167	PRPF8	100	99.743	Sarcophilus_harrisii
ENSMOCG00000016838	Prpf8	100	97.523	ENSSFOG00015013905	prpf8	100	97.523	Scleropages_formosus
ENSMOCG00000016838	Prpf8	100	97.394	ENSSMAG00000017736	prpf8	100	97.394	Scophthalmus_maximus
ENSMOCG00000016838	Prpf8	100	97.776	ENSSDUG00000003029	prpf8	100	97.776	Seriola_dumerili
ENSMOCG00000016838	Prpf8	68	98.936	ENSSLDG00000017096	prpf8	100	98.936	Seriola_lalandi_dorsalis
ENSMOCG00000016838	Prpf8	87	99.395	ENSSARG00000002892	PRPF8	87	99.395	Sorex_araneus
ENSMOCG00000016838	Prpf8	100	99.272	ENSSPUG00000007463	PRPF8	100	99.272	Sphenodon_punctatus
ENSMOCG00000016838	Prpf8	100	97.221	ENSSPAG00000015639	prpf8	100	97.221	Stegastes_partitus
ENSMOCG00000016838	Prpf8	100	99.957	ENSSSCG00000017817	PRPF8	100	99.957	Sus_scrofa
ENSMOCG00000016838	Prpf8	52	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSMOCG00000016838	Prpf8	100	99.443	ENSTGUG00000005648	-	100	99.443	Taeniopygia_guttata
ENSMOCG00000016838	Prpf8	100	97.563	ENSTRUG00000015906	prpf8	100	97.563	Takifugu_rubripes
ENSMOCG00000016838	Prpf8	95	98.746	ENSTNIG00000003460	prpf8	99	98.746	Tetraodon_nigroviridis
ENSMOCG00000016838	Prpf8	93	99.932	ENSTBEG00000006431	PRPF8	93	99.932	Tupaia_belangeri
ENSMOCG00000016838	Prpf8	100	99.358	ENSTTRG00000006869	PRPF8	100	99.358	Tursiops_truncatus
ENSMOCG00000016838	Prpf8	54	99.921	ENSUAMG00000015644	-	96	99.921	Ursus_americanus
ENSMOCG00000016838	Prpf8	100	99.700	ENSUMAG00000009385	PRPF8	100	99.700	Ursus_maritimus
ENSMOCG00000016838	Prpf8	71	99.310	ENSVPAG00000006063	-	71	99.310	Vicugna_pacos
ENSMOCG00000016838	Prpf8	100	99.957	ENSVVUG00000021695	PRPF8	99	99.957	Vulpes_vulpes
ENSMOCG00000016838	Prpf8	100	98.759	ENSXETG00000022259	prpf8	100	98.759	Xenopus_tropicalis
ENSMOCG00000016838	Prpf8	100	97.566	ENSXCOG00000012775	prpf8	100	97.566	Xiphophorus_couchianus
ENSMOCG00000016838	Prpf8	100	97.523	ENSXMAG00000008505	prpf8	100	97.523	Xiphophorus_maculatus