EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000016986 (Gene tree)
Gene ID: 101987087
Gene Symbol: -
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 42563 bases
Position: chr4:3391133-3433695
Accession: 101987087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000018807	ResIII	PF04851.15	7.8e-11	1	1
ENSMOCP00000018807	DEAD	PF00270.29	4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000022613	-	3613	XM_005345397	ENSMOCP00000018807	1051 (aa)	XP_005345454	-

Gene Model

Click here to download ENSMOCG00000016986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000016986's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000016986	-	54	41.980	ENSMOCG00000006305	Chd1l	62	41.980
ENSMOCG00000016986	-	93	83.874	ENSMOCG00000009464	Smarca1	93	83.874

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000016986	-	99	97.433	ENSG00000153147	SMARCA5	99	97.433	Homo_sapiens
ENSMOCG00000016986	-	99	97.624	ENSAMEG00000009585	SMARCA5	99	97.624	Ailuropoda_melanoleuca
ENSMOCG00000016986	-	92	96.509	ENSAPLG00000009206	SMARCA5	100	96.509	Anas_platyrhynchos
ENSMOCG00000016986	-	97	93.708	ENSACAG00000003038	SMARCA5	98	95.069	Anolis_carolinensis
ENSMOCG00000016986	-	99	97.529	ENSANAG00000019345	SMARCA5	99	98.896	Aotus_nancymaae
ENSMOCG00000016986	-	99	97.338	ENSBTAG00000003399	SMARCA5	99	97.338	Bos_taurus
ENSMOCG00000016986	-	99	97.624	ENSCJAG00000002735	SMARCA5	99	97.624	Callithrix_jacchus
ENSMOCG00000016986	-	99	97.624	ENSCAFG00000007525	SMARCA5	99	97.624	Canis_familiaris
ENSMOCG00000016986	-	98	97.674	ENSCAFG00020025641	SMARCA5	99	97.674	Canis_lupus_dingo
ENSMOCG00000016986	-	99	97.624	ENSCHIG00000013730	-	99	97.624	Capra_hircus
ENSMOCG00000016986	-	99	95.913	ENSCHIG00000016375	-	99	95.913	Capra_hircus
ENSMOCG00000016986	-	99	95.311	ENSTSYG00000009954	SMARCA5	99	99.094	Carlito_syrichta
ENSMOCG00000016986	-	97	95.379	ENSCAPG00000013747	SMARCA5	99	95.379	Cavia_aperea
ENSMOCG00000016986	-	99	98.192	ENSCPOG00000002259	SMARCA5	99	98.192	Cavia_porcellus
ENSMOCG00000016986	-	99	97.624	ENSCCAG00000027215	SMARCA5	99	98.996	Cebus_capucinus
ENSMOCG00000016986	-	99	97.529	ENSCATG00000044917	SMARCA5	99	97.529	Cercocebus_atys
ENSMOCG00000016986	-	97	97.154	ENSCLAG00000006153	SMARCA5	100	99.396	Chinchilla_lanigera
ENSMOCG00000016986	-	92	99.174	ENSCSAG00000003448	SMARCA5	100	99.174	Chlorocebus_sabaeus
ENSMOCG00000016986	-	90	98.178	ENSCHOG00000011724	SMARCA5	88	98.178	Choloepus_hoffmanni
ENSMOCG00000016986	-	95	98.094	ENSCPBG00000027535	SMARCA5	97	97.428	Chrysemys_picta_bellii
ENSMOCG00000016986	-	99	97.338	ENSCANG00000041629	SMARCA5	99	97.338	Colobus_angolensis_palliatus
ENSMOCG00000016986	-	100	98.006	ENSCGRG00001012719	Smarca5	99	98.006	Cricetulus_griseus_chok1gshd
ENSMOCG00000016986	-	97	97.933	ENSCGRG00000001417	Smarca5	99	99.496	Cricetulus_griseus_crigri
ENSMOCG00000016986	-	98	94.584	ENSDNOG00000009158	SMARCA5	96	95.459	Dasypus_novemcinctus
ENSMOCG00000016986	-	90	90.717	ENSDORG00000003466	Smarca5	97	90.717	Dipodomys_ordii
ENSMOCG00000016986	-	92	85.434	ENSEBUG00000014773	SMARCA5	96	85.434	Eptatretus_burgeri
ENSMOCG00000016986	-	99	97.909	ENSEASG00005001866	SMARCA5	98	99.394	Equus_asinus_asinus
ENSMOCG00000016986	-	99	97.909	ENSECAG00000002676	SMARCA5	99	97.909	Equus_caballus
ENSMOCG00000016986	-	94	94.864	ENSEEUG00000013176	SMARCA5	100	94.864	Erinaceus_europaeus
ENSMOCG00000016986	-	92	89.072	ENSELUG00000014653	SMARCA5	99	89.072	Esox_lucius
ENSMOCG00000016986	-	99	97.719	ENSFCAG00000004544	SMARCA5	99	97.719	Felis_catus
ENSMOCG00000016986	-	92	97.113	ENSFALG00000004987	SMARCA5	100	97.113	Ficedula_albicollis
ENSMOCG00000016986	-	99	95.594	ENSFDAG00000021016	SMARCA5	100	99.396	Fukomys_damarensis
ENSMOCG00000016986	-	98	85.149	ENSGMOG00000007519	SMARCA5	98	86.614	Gadus_morhua
ENSMOCG00000016986	-	97	95.980	ENSGALG00000009913	SMARCA5	97	96.538	Gallus_gallus
ENSMOCG00000016986	-	99	86.237	ENSGACG00000017238	SMARCA5	95	90.481	Gasterosteus_aculeatus
ENSMOCG00000016986	-	97	96.758	ENSGAGG00000019882	SMARCA5	98	96.866	Gopherus_agassizii
ENSMOCG00000016986	-	99	97.433	ENSGGOG00000012595	SMARCA5	99	98.993	Gorilla_gorilla
ENSMOCG00000016986	-	96	89.474	ENSHGLG00000000317	-	96	89.474	Heterocephalus_glaber_female
ENSMOCG00000016986	-	99	97.431	ENSHGLG00000000816	-	99	97.431	Heterocephalus_glaber_female
ENSMOCG00000016986	-	96	98.213	ENSHGLG00100018421	-	100	99.295	Heterocephalus_glaber_male
ENSMOCG00000016986	-	99	98.101	ENSSTOG00000010683	SMARCA5	99	98.101	Ictidomys_tridecemlineatus
ENSMOCG00000016986	-	99	97.714	ENSJJAG00000014965	Smarca5	99	97.714	Jaculus_jaculus
ENSMOCG00000016986	-	94	95.257	ENSLACG00000007091	SMARCA5	97	95.257	Latimeria_chalumnae
ENSMOCG00000016986	-	94	91.980	ENSLOCG00000008966	SMARCA5	98	90.467	Lepisosteus_oculatus
ENSMOCG00000016986	-	99	97.909	ENSLAFG00000007795	SMARCA5	99	97.909	Loxodonta_africana
ENSMOCG00000016986	-	99	97.529	ENSMFAG00000043649	SMARCA5	99	97.529	Macaca_fascicularis
ENSMOCG00000016986	-	99	97.529	ENSMMUG00000000829	SMARCA5	99	97.529	Macaca_mulatta
ENSMOCG00000016986	-	99	97.529	ENSMNEG00000031916	SMARCA5	99	97.529	Macaca_nemestrina
ENSMOCG00000016986	-	99	97.529	ENSMLEG00000042393	SMARCA5	99	97.529	Mandrillus_leucophaeus
ENSMOCG00000016986	-	95	96.900	ENSMGAG00000003517	SMARCA5	99	96.900	Meleagris_gallopavo
ENSMOCG00000016986	-	94	99.597	ENSMAUG00000015902	Smarca5	98	99.597	Mesocricetus_auratus
ENSMOCG00000016986	-	99	97.719	ENSMICG00000003971	SMARCA5	99	97.719	Microcebus_murinus
ENSMOCG00000016986	-	99	96.346	ENSMODG00000000391	SMARCA5	98	96.404	Monodelphis_domestica
ENSMOCG00000016986	-	99	98.287	ENSMUSG00000031715	Smarca5	99	98.287	Mus_musculus
ENSMOCG00000016986	-	99	98.478	MGP_PahariEiJ_G0022862	Smarca5	99	98.478	Mus_pahari
ENSMOCG00000016986	-	99	98.099	ENSMLUG00000000468	SMARCA5	99	98.099	Myotis_lucifugus
ENSMOCG00000016986	-	99	98.287	ENSNGAG00000000441	Smarca5	99	98.287	Nannospalax_galili
ENSMOCG00000016986	-	99	97.529	ENSNLEG00000005383	SMARCA5	99	97.529	Nomascus_leucogenys
ENSMOCG00000016986	-	92	91.116	ENSMEUG00000001267	SMARCA5	100	91.116	Notamacropus_eugenii
ENSMOCG00000016986	-	85	97.906	ENSOPRG00000014427	SMARCA5	86	97.906	Ochotona_princeps
ENSMOCG00000016986	-	92	98.762	ENSOANG00000013921	SMARCA5	100	98.762	Ornithorhynchus_anatinus
ENSMOCG00000016986	-	92	99.587	ENSOCUG00000013042	SMARCA5	100	99.587	Oryctolagus_cuniculus
ENSMOCG00000016986	-	99	97.624	ENSOGAG00000009702	SMARCA5	99	97.624	Otolemur_garnettii
ENSMOCG00000016986	-	99	97.336	ENSOARG00000010589	SMARCA5	99	97.336	Ovis_aries
ENSMOCG00000016986	-	99	97.529	ENSPPAG00000028523	SMARCA5	99	98.993	Pan_paniscus
ENSMOCG00000016986	-	98	92.390	ENSPPRG00000004925	SMARCA5	96	93.781	Panthera_pardus
ENSMOCG00000016986	-	96	98.911	ENSPTIG00000020959	SMARCA5	97	98.911	Panthera_tigris_altaica
ENSMOCG00000016986	-	99	97.529	ENSPTRG00000016472	SMARCA5	99	98.993	Pan_troglodytes
ENSMOCG00000016986	-	99	97.529	ENSPANG00000001175	SMARCA5	99	97.529	Papio_anubis
ENSMOCG00000016986	-	93	90.695	ENSPKIG00000015885	SMARCA5	100	90.928	Paramormyrops_kingsleyae
ENSMOCG00000016986	-	93	90.369	ENSPKIG00000015699	SMARCA5	98	89.362	Paramormyrops_kingsleyae
ENSMOCG00000016986	-	95	95.787	ENSPSIG00000004177	SMARCA5	100	95.787	Pelodiscus_sinensis
ENSMOCG00000016986	-	92	89.609	ENSPMGG00000012316	SMARCA5	100	89.609	Periophthalmus_magnuspinnatus
ENSMOCG00000016986	-	97	97.642	ENSPEMG00000008060	Smarca5	99	97.642	Peromyscus_maniculatus_bairdii
ENSMOCG00000016986	-	96	69.360	ENSPMAG00000006011	SMARCA5	83	83.385	Petromyzon_marinus
ENSMOCG00000016986	-	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSMOCG00000016986	-	99	96.146	ENSPCIG00000003926	SMARCA5	99	95.224	Phascolarctos_cinereus
ENSMOCG00000016986	-	99	97.624	ENSPPYG00000015091	SMARCA5	99	97.624	Pongo_abelii
ENSMOCG00000016986	-	86	89.157	ENSPCAG00000014230	SMARCA5	88	90.233	Procavia_capensis
ENSMOCG00000016986	-	99	94.962	ENSPCOG00000026744	SMARCA5	99	95.573	Propithecus_coquereli
ENSMOCG00000016986	-	99	97.429	ENSPVAG00000006482	SMARCA5	100	97.429	Pteropus_vampyrus
ENSMOCG00000016986	-	97	88.149	ENSPNAG00000027824	SMARCA5	97	90.041	Pygocentrus_nattereri
ENSMOCG00000016986	-	95	99.497	ENSRNOG00000018149	Smarca5	100	99.497	Rattus_norvegicus
ENSMOCG00000016986	-	99	97.341	ENSRBIG00000044644	SMARCA5	99	97.341	Rhinopithecus_bieti
ENSMOCG00000016986	-	98	97.289	ENSRROG00000029591	SMARCA5	99	98.994	Rhinopithecus_roxellana
ENSMOCG00000016986	-	99	97.719	ENSSBOG00000036257	SMARCA5	99	97.719	Saimiri_boliviensis_boliviensis
ENSMOCG00000016986	-	94	98.691	ENSSHAG00000008464	SMARCA5	100	98.691	Sarcophilus_harrisii
ENSMOCG00000016986	-	95	89.950	ENSSFOG00015013252	SMARCA5	97	89.950	Scleropages_formosus
ENSMOCG00000016986	-	97	94.494	ENSSPUG00000007604	SMARCA5	99	95.980	Sphenodon_punctatus
ENSMOCG00000016986	-	99	97.624	ENSSSCG00000009047	SMARCA5	99	97.688	Sus_scrofa
ENSMOCG00000016986	-	96	96.028	ENSTGUG00000002408	SMARCA5	99	96.028	Taeniopygia_guttata
ENSMOCG00000016986	-	98	97.578	ENSUAMG00000023495	SMARCA5	98	97.578	Ursus_americanus
ENSMOCG00000016986	-	95	99.003	ENSUMAG00000015324	SMARCA5	97	99.003	Ursus_maritimus
ENSMOCG00000016986	-	99	97.529	ENSVPAG00000008982	SMARCA5	99	97.529	Vicugna_pacos
ENSMOCG00000016986	-	99	97.624	ENSVVUG00000017473	SMARCA5	99	97.624	Vulpes_vulpes
ENSMOCG00000016986	-	93	90.172	ENSXETG00000017566	smarca5	95	93.136	Xenopus_tropicalis