EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000017022 (Gene tree)
Gene ID: 102002143
Gene Symbol: Rab1a
Alias: Gtbp|Rab-1|Rab1|Ypt1|ras-related YPT1 protein
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 30461 bases
Position: chrJH996439.1:6360627-6391087
Accession: 102002143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000018865	MMR_HSR1	PF01926.23	1.4e-05	1	1
ENSMOCP00000018859	MMR_HSR1	PF01926.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000022665	-	2866	XM_005366450	ENSMOCP00000018859	205 (aa)	XP_005366507	UPI00038BCE62
ENSMOCT00000022668	-	417	-	ENSMOCP00000018862	138 (aa)	-	-
ENSMOCT00000022670	-	381	-	ENSMOCP00000018864	126 (aa)	-	-
ENSMOCT00000022671	-	609	-	ENSMOCP00000018865	202 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000017022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000017022's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000017022	Rab1a	81	38.415	ENSMOCG00000022441	Nras	87	38.922
ENSMOCG00000017022	Rab1a	69	30.872	ENSMOCG00000002133	Arl4d	73	30.872
ENSMOCG00000017022	Rab1a	97	35.533	ENSMOCG00000006448	Rab17	92	35.533
ENSMOCG00000017022	Rab1a	96	34.536	ENSMOCG00000000744	Hras	94	34.536
ENSMOCG00000017022	Rab1a	58	33.058	ENSMOCG00000019685	Arl2	61	33.058
ENSMOCG00000017022	Rab1a	100	46.009	ENSMOCG00000021138	Rab11a	99	46.009
ENSMOCG00000017022	Rab1a	96	52.062	ENSMOCG00000021448	Rab13	97	51.777
ENSMOCG00000017022	Rab1a	83	49.704	ENSMOCG00000000452	Rab12	86	46.032
ENSMOCG00000017022	Rab1a	96	39.286	ENSMOCG00000014387	Rab6a	93	39.286
ENSMOCG00000017022	Rab1a	92	47.849	ENSMOCG00000014140	Rab2a	99	45.714
ENSMOCG00000017022	Rab1a	80	50.909	ENSMOCG00000018796	Rab15	78	50.909
ENSMOCG00000017022	Rab1a	96	44.330	ENSMOCG00000009706	Rab5a	90	44.330
ENSMOCG00000017022	Rab1a	77	38.994	ENSMOCG00000015920	Rab9	79	38.994
ENSMOCG00000017022	Rab1a	83	44.186	ENSMOCG00000019866	Rab33b	76	43.429
ENSMOCG00000017022	Rab1a	84	46.821	ENSMOCG00000010953	Rab25	81	46.821
ENSMOCG00000017022	Rab1a	81	48.214	ENSMOCG00000020142	Rab33a	71	48.214
ENSMOCG00000017022	Rab1a	81	50.610	ENSMOCG00000009821	-	82	50.602
ENSMOCG00000017022	Rab1a	76	37.255	ENSMOCG00000002775	Rabl2	67	37.255
ENSMOCG00000017022	Rab1a	96	43.590	ENSMOCG00000018531	-	89	43.590
ENSMOCG00000017022	Rab1a	79	39.264	ENSMOCG00000002760	Rab7	79	39.264
ENSMOCG00000017022	Rab1a	91	48.634	ENSMOCG00000013161	Rab2b	99	45.960
ENSMOCG00000017022	Rab1a	86	43.820	ENSMOCG00000006994	Rab39b	84	43.820
ENSMOCG00000017022	Rab1a	96	45.361	ENSMOCG00000013044	Rab18	93	45.361
ENSMOCG00000017022	Rab1a	96	39.086	ENSMOCG00000012268	Rab22a	97	39.086
ENSMOCG00000017022	Rab1a	82	30.178	ENSMOCG00000017489	Eras	71	30.178
ENSMOCG00000017022	Rab1a	58	32.203	ENSMOCG00000018769	Arl8b	61	32.203
ENSMOCG00000017022	Rab1a	100	46.047	ENSMOCG00000012667	Rab11b	99	46.047
ENSMOCG00000017022	Rab1a	97	39.614	ENSMOCG00000021639	Rab42	96	39.614
ENSMOCG00000017022	Rab1a	62	31.538	ENSMOCG00000004173	Arl14	66	31.538
ENSMOCG00000017022	Rab1a	83	32.544	ENSMOCG00000022240	Rheb	91	32.544
ENSMOCG00000017022	Rab1a	70	30.769	ENSMOCG00000015961	Arl3	73	30.769
ENSMOCG00000017022	Rab1a	97	33.649	ENSMOCG00000004529	Rab36	79	33.649
ENSMOCG00000017022	Rab1a	99	44.554	ENSMOCG00000003760	Rab14	93	44.554
ENSMOCG00000017022	Rab1a	81	34.337	ENSMOCG00000000444	Rab23	70	34.337
ENSMOCG00000017022	Rab1a	77	39.623	ENSMOCG00000010381	Rab9b	83	37.952
ENSMOCG00000017022	Rab1a	78	40.373	ENSMOCG00000016580	Rab34	62	40.491
ENSMOCG00000017022	Rab1a	58	31.933	ENSMOCG00000019911	Arl4a	59	31.933
ENSMOCG00000017022	Rab1a	98	51.269	ENSMOCG00000019999	Rab35	98	51.269
ENSMOCG00000017022	Rab1a	81	37.805	ENSMOCG00000011313	Kras	95	35.359
ENSMOCG00000017022	Rab1a	82	35.928	ENSMOCG00000000582	Mras	80	35.928
ENSMOCG00000017022	Rab1a	99	91.584	ENSMOCG00000014673	Rab1b	100	91.584
ENSMOCG00000017022	Rab1a	58	34.746	ENSMOCG00000011687	Arl8a	62	34.454
ENSMOCG00000017022	Rab1a	58	31.092	ENSMOCG00000006232	Arl4c	61	31.092
ENSMOCG00000017022	Rab1a	96	36.923	ENSMOCG00000001455	Rab6b	94	36.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000017022	Rab1a	100	99.512	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSMOCG00000017022	Rab1a	99	95.050	ENSAPOG00000008143	-	100	95.050	Acanthochromis_polyacanthus
ENSMOCG00000017022	Rab1a	100	99.512	ENSAMEG00000001127	RAB1A	100	99.512	Ailuropoda_melanoleuca
ENSMOCG00000017022	Rab1a	99	95.050	ENSAOCG00000020606	-	100	95.050	Amphiprion_ocellaris
ENSMOCG00000017022	Rab1a	99	95.050	ENSAPEG00000022488	-	100	95.050	Amphiprion_percula
ENSMOCG00000017022	Rab1a	100	99.512	ENSANAG00000020929	RAB1A	100	99.512	Aotus_nancymaae
ENSMOCG00000017022	Rab1a	99	95.545	ENSACLG00000003326	-	100	95.545	Astatotilapia_calliptera
ENSMOCG00000017022	Rab1a	99	94.059	ENSAMXG00000034850	-	100	94.059	Astyanax_mexicanus
ENSMOCG00000017022	Rab1a	100	99.512	ENSBTAG00000016720	RAB1A	100	99.512	Bos_taurus
ENSMOCG00000017022	Rab1a	100	99.512	ENSCJAG00000046275	RAB1A	100	99.512	Callithrix_jacchus
ENSMOCG00000017022	Rab1a	100	99.512	ENSCAFG00000003187	RAB1A	100	99.512	Canis_familiaris
ENSMOCG00000017022	Rab1a	100	99.512	ENSCAFG00020026971	RAB1A	100	99.512	Canis_lupus_dingo
ENSMOCG00000017022	Rab1a	98	99.492	ENSCHIG00000014060	RAB1A	96	99.492	Capra_hircus
ENSMOCG00000017022	Rab1a	100	97.561	ENSTSYG00000005996	RAB1A	100	99.492	Carlito_syrichta
ENSMOCG00000017022	Rab1a	100	99.512	ENSCPOG00000015437	RAB1A	100	99.512	Cavia_porcellus
ENSMOCG00000017022	Rab1a	100	99.512	ENSCCAG00000021869	RAB1A	100	99.512	Cebus_capucinus
ENSMOCG00000017022	Rab1a	100	99.512	ENSCATG00000030853	RAB1A	100	99.512	Cercocebus_atys
ENSMOCG00000017022	Rab1a	100	99.512	ENSCLAG00000014766	RAB1A	100	99.512	Chinchilla_lanigera
ENSMOCG00000017022	Rab1a	100	99.024	ENSCPBG00000013243	RAB1A	100	99.024	Chrysemys_picta_bellii
ENSMOCG00000017022	Rab1a	100	97.073	ENSCANG00000035916	RAB1A	100	97.073	Colobus_angolensis_palliatus
ENSMOCG00000017022	Rab1a	100	99.512	ENSCGRG00001012691	-	100	99.512	Cricetulus_griseus_chok1gshd
ENSMOCG00000017022	Rab1a	100	99.512	ENSCGRG00000008456	-	100	99.512	Cricetulus_griseus_crigri
ENSMOCG00000017022	Rab1a	100	99.512	ENSDNOG00000018236	RAB1A	100	99.512	Dasypus_novemcinctus
ENSMOCG00000017022	Rab1a	100	99.512	ENSDORG00000028628	-	100	99.512	Dipodomys_ordii
ENSMOCG00000017022	Rab1a	100	83.981	FBgn0285937	Rab1	100	83.981	Drosophila_melanogaster
ENSMOCG00000017022	Rab1a	99	99.505	ENSETEG00000002205	RAB1A	100	99.505	Echinops_telfairi
ENSMOCG00000017022	Rab1a	100	99.512	ENSEASG00005007298	RAB1A	100	99.512	Equus_asinus_asinus
ENSMOCG00000017022	Rab1a	100	99.512	ENSECAG00000009926	RAB1A	100	99.512	Equus_caballus
ENSMOCG00000017022	Rab1a	99	99.505	ENSEEUG00000011721	RAB1A	100	99.505	Erinaceus_europaeus
ENSMOCG00000017022	Rab1a	99	95.098	ENSELUG00000012166	RAB1A	96	95.098	Esox_lucius
ENSMOCG00000017022	Rab1a	100	99.512	ENSFCAG00000002536	RAB1A	100	99.512	Felis_catus
ENSMOCG00000017022	Rab1a	99	98.492	ENSFALG00000013624	RAB1A	99	97.044	Ficedula_albicollis
ENSMOCG00000017022	Rab1a	100	99.512	ENSFDAG00000019505	-	100	99.512	Fukomys_damarensis
ENSMOCG00000017022	Rab1a	99	94.059	ENSFHEG00000014414	-	100	94.059	Fundulus_heteroclitus
ENSMOCG00000017022	Rab1a	100	99.024	ENSGALG00000031582	RAB1A	100	99.024	Gallus_gallus
ENSMOCG00000017022	Rab1a	99	94.059	ENSGAFG00000000918	-	100	94.059	Gambusia_affinis
ENSMOCG00000017022	Rab1a	100	99.024	ENSGAGG00000006802	RAB1A	100	99.024	Gopherus_agassizii
ENSMOCG00000017022	Rab1a	100	99.512	ENSGGOG00000026603	RAB1A	100	99.512	Gorilla_gorilla
ENSMOCG00000017022	Rab1a	100	99.512	ENSHGLG00000013585	RAB1A	100	99.512	Heterocephalus_glaber_female
ENSMOCG00000017022	Rab1a	98	99.492	ENSHGLG00100007994	RAB1A	97	99.492	Heterocephalus_glaber_male
ENSMOCG00000017022	Rab1a	100	99.512	ENSSTOG00000020693	-	100	99.512	Ictidomys_tridecemlineatus
ENSMOCG00000017022	Rab1a	98	99.492	ENSJJAG00000014396	Rab1a	100	99.492	Jaculus_jaculus
ENSMOCG00000017022	Rab1a	98	94.924	ENSKMAG00000014038	-	93	94.924	Kryptolebias_marmoratus
ENSMOCG00000017022	Rab1a	99	94.554	ENSLBEG00000028426	RAB1A	100	94.554	Labrus_bergylta
ENSMOCG00000017022	Rab1a	100	98.049	ENSLACG00000012869	RAB1A	100	98.049	Latimeria_chalumnae
ENSMOCG00000017022	Rab1a	100	99.512	ENSLAFG00000016666	RAB1A	100	99.512	Loxodonta_africana
ENSMOCG00000017022	Rab1a	100	99.512	ENSMFAG00000046246	RAB1A	100	99.512	Macaca_fascicularis
ENSMOCG00000017022	Rab1a	98	99.492	ENSMMUG00000021721	RAB1A	91	99.492	Macaca_mulatta
ENSMOCG00000017022	Rab1a	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSMOCG00000017022	Rab1a	100	99.512	ENSMLEG00000042535	RAB1A	100	99.512	Mandrillus_leucophaeus
ENSMOCG00000017022	Rab1a	99	95.545	ENSMZEG00005013959	-	100	95.545	Maylandia_zebra
ENSMOCG00000017022	Rab1a	98	98.985	ENSMGAG00000004611	RAB1A	98	98.985	Meleagris_gallopavo
ENSMOCG00000017022	Rab1a	100	99.024	ENSMAUG00000012156	Rab1a	100	99.024	Mesocricetus_auratus
ENSMOCG00000017022	Rab1a	100	99.512	ENSMICG00000012587	RAB1A	100	99.512	Microcebus_murinus
ENSMOCG00000017022	Rab1a	99	93.069	ENSMMOG00000018709	RAB1A	100	93.069	Mola_mola
ENSMOCG00000017022	Rab1a	100	99.024	ENSMODG00000003340	RAB1A	100	99.024	Monodelphis_domestica
ENSMOCG00000017022	Rab1a	100	99.512	MGP_CAROLIEiJ_G0016115	Rab1a	100	99.512	Mus_caroli
ENSMOCG00000017022	Rab1a	100	99.512	ENSMUSG00000020149	Rab1a	100	99.512	Mus_musculus
ENSMOCG00000017022	Rab1a	100	99.512	MGP_PahariEiJ_G0016776	Rab1a	100	99.512	Mus_pahari
ENSMOCG00000017022	Rab1a	100	99.512	MGP_SPRETEiJ_G0016958	Rab1a	100	99.512	Mus_spretus
ENSMOCG00000017022	Rab1a	100	99.512	ENSMPUG00000006139	RAB1A	82	99.512	Mustela_putorius_furo
ENSMOCG00000017022	Rab1a	100	99.512	ENSMLUG00000009489	RAB1A	100	99.512	Myotis_lucifugus
ENSMOCG00000017022	Rab1a	100	99.512	ENSNGAG00000005838	Rab1a	100	99.512	Nannospalax_galili
ENSMOCG00000017022	Rab1a	99	95.545	ENSNBRG00000020492	-	100	95.545	Neolamprologus_brichardi
ENSMOCG00000017022	Rab1a	98	99.492	ENSOPRG00000006595	RAB1A	100	99.492	Ochotona_princeps
ENSMOCG00000017022	Rab1a	95	99.479	ENSODEG00000011248	-	96	99.479	Octodon_degus
ENSMOCG00000017022	Rab1a	99	93.137	ENSONIG00000006819	-	100	93.137	Oreochromis_niloticus
ENSMOCG00000017022	Rab1a	100	99.024	ENSOANG00000012438	RAB1A	100	99.024	Ornithorhynchus_anatinus
ENSMOCG00000017022	Rab1a	100	99.512	ENSOCUG00000017003	RAB1A	100	99.512	Oryctolagus_cuniculus
ENSMOCG00000017022	Rab1a	100	99.512	ENSOGAG00000026181	RAB1A	100	99.512	Otolemur_garnettii
ENSMOCG00000017022	Rab1a	98	99.492	ENSOARG00000019997	RAB1A	97	99.492	Ovis_aries
ENSMOCG00000017022	Rab1a	99	99.505	ENSPPAG00000030253	RAB1A	100	99.505	Pan_paniscus
ENSMOCG00000017022	Rab1a	100	99.512	ENSPPRG00000025077	RAB1A	100	99.512	Panthera_pardus
ENSMOCG00000017022	Rab1a	98	99.492	ENSPTIG00000013471	RAB1A	97	99.492	Panthera_tigris_altaica
ENSMOCG00000017022	Rab1a	100	99.512	ENSPTRG00000011989	RAB1A	100	99.512	Pan_troglodytes
ENSMOCG00000017022	Rab1a	100	99.512	ENSPANG00000010485	RAB1A	100	99.512	Papio_anubis
ENSMOCG00000017022	Rab1a	98	98.985	ENSPSIG00000008028	RAB1A	99	96.059	Pelodiscus_sinensis
ENSMOCG00000017022	Rab1a	99	95.098	ENSPMGG00000021015	-	99	95.098	Periophthalmus_magnuspinnatus
ENSMOCG00000017022	Rab1a	100	99.512	ENSPEMG00000009340	Rab1a	100	99.512	Peromyscus_maniculatus_bairdii
ENSMOCG00000017022	Rab1a	100	99.024	ENSPCIG00000023212	RAB1A	100	99.024	Phascolarctos_cinereus
ENSMOCG00000017022	Rab1a	99	92.647	ENSPFOG00000000498	-	99	92.647	Poecilia_formosa
ENSMOCG00000017022	Rab1a	99	93.564	ENSPLAG00000015592	-	100	93.564	Poecilia_latipinna
ENSMOCG00000017022	Rab1a	99	93.564	ENSPMEG00000005288	-	100	93.564	Poecilia_mexicana
ENSMOCG00000017022	Rab1a	100	99.512	ENSPPYG00000012360	RAB1A	100	99.512	Pongo_abelii
ENSMOCG00000017022	Rab1a	100	99.512	ENSPCOG00000017244	RAB1A	100	99.512	Propithecus_coquereli
ENSMOCG00000017022	Rab1a	99	95.545	ENSPNYG00000015841	-	100	95.545	Pundamilia_nyererei
ENSMOCG00000017022	Rab1a	100	99.512	ENSRNOG00000004992	Rab1a	100	99.512	Rattus_norvegicus
ENSMOCG00000017022	Rab1a	100	99.512	ENSSBOG00000023732	RAB1A	100	99.512	Saimiri_boliviensis_boliviensis
ENSMOCG00000017022	Rab1a	99	98.000	ENSSHAG00000003597	RAB1A	98	97.512	Sarcophilus_harrisii
ENSMOCG00000017022	Rab1a	99	95.050	ENSSMAG00000021049	-	100	95.050	Scophthalmus_maximus
ENSMOCG00000017022	Rab1a	99	95.545	ENSSDUG00000022535	RAB1A	100	95.545	Seriola_dumerili
ENSMOCG00000017022	Rab1a	100	99.024	ENSSPUG00000012822	RAB1A	100	99.024	Sphenodon_punctatus
ENSMOCG00000017022	Rab1a	99	95.050	ENSSPAG00000012564	-	100	95.050	Stegastes_partitus
ENSMOCG00000017022	Rab1a	100	99.512	ENSSSCG00000008359	RAB1A	100	99.512	Sus_scrofa
ENSMOCG00000017022	Rab1a	98	98.985	ENSTGUG00000002328	RAB1A	100	96.585	Taeniopygia_guttata
ENSMOCG00000017022	Rab1a	99	94.554	ENSTRUG00000024994	RAB1A	100	94.554	Takifugu_rubripes
ENSMOCG00000017022	Rab1a	99	98.500	ENSUMAG00000021038	RAB1A	99	99.492	Ursus_maritimus
ENSMOCG00000017022	Rab1a	98	98.990	ENSVPAG00000005640	RAB1A	99	98.990	Vicugna_pacos
ENSMOCG00000017022	Rab1a	100	99.512	ENSVVUG00000027588	RAB1A	100	99.512	Vulpes_vulpes
ENSMOCG00000017022	Rab1a	99	94.059	ENSXMAG00000015776	-	100	94.059	Xiphophorus_maculatus