EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000017142 (Gene tree)
Gene ID: 101987797
Gene Symbol: Smarcad1
Alias: D6Pas1|Etl1
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 68380 bases
Position: chrLG3:21662100-21730479
Accession: 101987797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000019028	ResIII	PF04851.15	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000022835	-	4644	XM_013351290	ENSMOCP00000019028	1023 (aa)	XP_013206744	UPI00038BB60F

Gene Model

Click here to download ENSMOCG00000017142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000017142's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000017142	Smarcad1	50	34.701	ENSMOCG00000018583	-	55	34.701
ENSMOCG00000017142	Smarcad1	51	36.890	ENSMOCG00000019342	Hells	67	36.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000017142	Smarcad1	100	93.080	ENSG00000163104	SMARCAD1	100	97.148	Homo_sapiens
ENSMOCG00000017142	Smarcad1	98	61.582	ENSAPOG00000011446	smarcad1a	96	61.582	Acanthochromis_polyacanthus
ENSMOCG00000017142	Smarcad1	100	92.218	ENSAMEG00000005844	SMARCAD1	100	92.218	Ailuropoda_melanoleuca
ENSMOCG00000017142	Smarcad1	68	68.773	ENSACIG00000018326	smarcad1a	100	68.773	Amphilophus_citrinellus
ENSMOCG00000017142	Smarcad1	100	61.582	ENSAOCG00000019762	smarcad1a	96	61.582	Amphiprion_ocellaris
ENSMOCG00000017142	Smarcad1	100	61.723	ENSAPEG00000003889	smarcad1a	98	60.385	Amphiprion_percula
ENSMOCG00000017142	Smarcad1	78	65.850	ENSATEG00000015608	smarcad1a	84	65.850	Anabas_testudineus
ENSMOCG00000017142	Smarcad1	94	71.665	ENSAPLG00000004630	SMARCAD1	100	71.768	Anas_platyrhynchos
ENSMOCG00000017142	Smarcad1	100	69.553	ENSACAG00000013554	SMARCAD1	100	69.747	Anolis_carolinensis
ENSMOCG00000017142	Smarcad1	100	92.704	ENSANAG00000020488	SMARCAD1	100	92.704	Aotus_nancymaae
ENSMOCG00000017142	Smarcad1	92	66.459	ENSACLG00000017063	smarcad1a	98	60.631	Astatotilapia_calliptera
ENSMOCG00000017142	Smarcad1	70	61.345	ENSAMXG00000015470	smarcad1a	98	61.345	Astyanax_mexicanus
ENSMOCG00000017142	Smarcad1	77	59.091	ENSAMXG00000019130	smarcad1b	85	60.025	Astyanax_mexicanus
ENSMOCG00000017142	Smarcad1	100	91.351	ENSBTAG00000017061	SMARCAD1	100	91.351	Bos_taurus
ENSMOCG00000017142	Smarcad1	60	43.226	WBGene00010845	M03C11.8	70	40.483	Caenorhabditis_elegans
ENSMOCG00000017142	Smarcad1	100	93.171	ENSCJAG00000006778	SMARCAD1	100	93.171	Callithrix_jacchus
ENSMOCG00000017142	Smarcad1	100	92.023	ENSCAFG00000010026	SMARCAD1	100	92.023	Canis_familiaris
ENSMOCG00000017142	Smarcad1	86	93.552	ENSCAFG00020003994	SMARCAD1	99	93.552	Canis_lupus_dingo
ENSMOCG00000017142	Smarcad1	100	91.634	ENSCHIG00000012905	SMARCAD1	100	91.634	Capra_hircus
ENSMOCG00000017142	Smarcad1	100	93.087	ENSTSYG00000002706	SMARCAD1	100	93.087	Carlito_syrichta
ENSMOCG00000017142	Smarcad1	90	75.510	ENSCAPG00000016744	SMARCAD1	96	76.375	Cavia_aperea
ENSMOCG00000017142	Smarcad1	100	91.085	ENSCPOG00000011398	SMARCAD1	100	91.085	Cavia_porcellus
ENSMOCG00000017142	Smarcad1	100	92.885	ENSCCAG00000022264	SMARCAD1	100	97.315	Cebus_capucinus
ENSMOCG00000017142	Smarcad1	100	92.885	ENSCATG00000035663	SMARCAD1	100	93.701	Cercocebus_atys
ENSMOCG00000017142	Smarcad1	82	94.286	ENSCSAG00000004186	SMARCAD1	100	94.286	Chlorocebus_sabaeus
ENSMOCG00000017142	Smarcad1	100	71.893	ENSCPBG00000013203	SMARCAD1	100	72.579	Chrysemys_picta_bellii
ENSMOCG00000017142	Smarcad1	64	49.249	ENSCING00000001688	-	99	49.249	Ciona_intestinalis
ENSMOCG00000017142	Smarcad1	100	92.788	ENSCANG00000003556	SMARCAD1	100	97.148	Colobus_angolensis_palliatus
ENSMOCG00000017142	Smarcad1	100	95.406	ENSCGRG00001015056	Smarcad1	100	95.406	Cricetulus_griseus_chok1gshd
ENSMOCG00000017142	Smarcad1	100	95.406	ENSCGRG00000014087	Smarcad1	100	95.406	Cricetulus_griseus_crigri
ENSMOCG00000017142	Smarcad1	100	60.201	ENSCSEG00000014419	-	96	58.540	Cynoglossus_semilaevis
ENSMOCG00000017142	Smarcad1	97	62.798	ENSCSEG00000017903	smarcad1a	100	46.737	Cynoglossus_semilaevis
ENSMOCG00000017142	Smarcad1	85	53.443	ENSDARG00000014041	smarcad1a	92	54.171	Danio_rerio
ENSMOCG00000017142	Smarcad1	78	57.602	ENSDARG00000073721	smarcad1b	82	58.673	Danio_rerio
ENSMOCG00000017142	Smarcad1	100	91.910	ENSDNOG00000000806	-	100	91.910	Dasypus_novemcinctus
ENSMOCG00000017142	Smarcad1	100	89.786	ENSDORG00000012331	Smarcad1	100	89.786	Dipodomys_ordii
ENSMOCG00000017142	Smarcad1	63	45.846	FBgn0032157	Etl1	80	44.721	Drosophila_melanogaster
ENSMOCG00000017142	Smarcad1	61	46.022	ENSEBUG00000003969	smarcad1a	96	46.191	Eptatretus_burgeri
ENSMOCG00000017142	Smarcad1	100	92.218	ENSEASG00005012382	SMARCAD1	100	92.218	Equus_asinus_asinus
ENSMOCG00000017142	Smarcad1	100	92.218	ENSECAG00000011562	SMARCAD1	100	92.218	Equus_caballus
ENSMOCG00000017142	Smarcad1	100	51.115	ENSELUG00000018535	smarcad1a	100	50.931	Esox_lucius
ENSMOCG00000017142	Smarcad1	79	56.953	ENSELUG00000019154	smarcad1b	81	57.038	Esox_lucius
ENSMOCG00000017142	Smarcad1	100	91.723	ENSFCAG00000003958	SMARCAD1	100	96.812	Felis_catus
ENSMOCG00000017142	Smarcad1	100	66.731	ENSFALG00000006089	SMARCAD1	100	66.538	Ficedula_albicollis
ENSMOCG00000017142	Smarcad1	100	92.195	ENSFDAG00000017027	SMARCAD1	100	92.195	Fukomys_damarensis
ENSMOCG00000017142	Smarcad1	65	65.172	ENSFHEG00000012778	smarcad1a	63	64.265	Fundulus_heteroclitus
ENSMOCG00000017142	Smarcad1	84	57.258	ENSGMOG00000018995	smarcad1a	97	56.701	Gadus_morhua
ENSMOCG00000017142	Smarcad1	79	71.707	ENSGALG00000037339	SMARCAD1	94	73.785	Gallus_gallus
ENSMOCG00000017142	Smarcad1	90	66.509	ENSGAFG00000013498	smarcad1a	60	66.509	Gambusia_affinis
ENSMOCG00000017142	Smarcad1	85	57.775	ENSGACG00000007327	smarcad1a	99	58.116	Gasterosteus_aculeatus
ENSMOCG00000017142	Smarcad1	100	72.115	ENSGAGG00000008582	SMARCAD1	100	72.394	Gopherus_agassizii
ENSMOCG00000017142	Smarcad1	100	93.177	ENSGGOG00000023001	SMARCAD1	100	93.177	Gorilla_gorilla
ENSMOCG00000017142	Smarcad1	92	66.303	ENSHBUG00000011042	smarcad1a	98	60.274	Haplochromis_burtoni
ENSMOCG00000017142	Smarcad1	100	92.128	ENSHGLG00000005070	SMARCAD1	100	92.128	Heterocephalus_glaber_female
ENSMOCG00000017142	Smarcad1	100	92.128	ENSHGLG00100006812	SMARCAD1	100	92.128	Heterocephalus_glaber_male
ENSMOCG00000017142	Smarcad1	99	63.919	ENSHCOG00000007848	smarcad1a	66	58.445	Hippocampus_comes
ENSMOCG00000017142	Smarcad1	81	56.938	ENSIPUG00000022817	smarcad1b	84	59.796	Ictalurus_punctatus
ENSMOCG00000017142	Smarcad1	79	64.789	ENSIPUG00000000242	smarcad1a	97	59.780	Ictalurus_punctatus
ENSMOCG00000017142	Smarcad1	100	93.184	ENSSTOG00000001227	SMARCAD1	100	93.184	Ictidomys_tridecemlineatus
ENSMOCG00000017142	Smarcad1	100	93.372	ENSJJAG00000022342	Smarcad1	100	93.372	Jaculus_jaculus
ENSMOCG00000017142	Smarcad1	64	63.897	ENSKMAG00000021351	smarcad1a	63	63.447	Kryptolebias_marmoratus
ENSMOCG00000017142	Smarcad1	97	64.040	ENSLBEG00000008088	smarcad1a	98	61.769	Labrus_bergylta
ENSMOCG00000017142	Smarcad1	100	54.773	ENSLOCG00000012909	smarcad1a	100	55.342	Lepisosteus_oculatus
ENSMOCG00000017142	Smarcad1	100	89.864	ENSLAFG00000000040	SMARCAD1	100	89.864	Loxodonta_africana
ENSMOCG00000017142	Smarcad1	100	92.885	ENSMFAG00000042606	SMARCAD1	100	93.813	Macaca_fascicularis
ENSMOCG00000017142	Smarcad1	87	93.813	ENSMMUG00000022242	SMARCAD1	100	93.813	Macaca_mulatta
ENSMOCG00000017142	Smarcad1	100	92.885	ENSMNEG00000038117	SMARCAD1	100	97.148	Macaca_nemestrina
ENSMOCG00000017142	Smarcad1	100	92.885	ENSMLEG00000038333	SMARCAD1	100	97.148	Mandrillus_leucophaeus
ENSMOCG00000017142	Smarcad1	69	63.092	ENSMAMG00000000933	smarcad1a	68	63.092	Mastacembelus_armatus
ENSMOCG00000017142	Smarcad1	92	66.459	ENSMZEG00005005203	smarcad1a	100	49.358	Maylandia_zebra
ENSMOCG00000017142	Smarcad1	94	63.955	ENSMGAG00000005577	SMARCAD1	100	63.955	Meleagris_gallopavo
ENSMOCG00000017142	Smarcad1	100	95.112	ENSMAUG00000008417	Smarcad1	100	95.112	Mesocricetus_auratus
ENSMOCG00000017142	Smarcad1	100	92.031	ENSMICG00000009746	SMARCAD1	100	92.031	Microcebus_murinus
ENSMOCG00000017142	Smarcad1	77	58.177	ENSMMOG00000000275	smarcad1a	97	58.555	Mola_mola
ENSMOCG00000017142	Smarcad1	100	79.710	ENSMODG00000019268	SMARCAD1	100	79.710	Monodelphis_domestica
ENSMOCG00000017142	Smarcad1	95	95.390	MGP_CAROLIEiJ_G0028458	-	77	95.390	Mus_caroli
ENSMOCG00000017142	Smarcad1	100	94.238	ENSMUSG00000029920	Smarcad1	100	94.238	Mus_musculus
ENSMOCG00000017142	Smarcad1	100	94.434	MGP_PahariEiJ_G0022198	Smarcad1	100	94.434	Mus_pahari
ENSMOCG00000017142	Smarcad1	100	94.336	MGP_SPRETEiJ_G0029462	Smarcad1	100	94.336	Mus_spretus
ENSMOCG00000017142	Smarcad1	100	92.023	ENSMPUG00000002111	SMARCAD1	100	92.023	Mustela_putorius_furo
ENSMOCG00000017142	Smarcad1	100	89.202	ENSMLUG00000000425	SMARCAD1	100	89.202	Myotis_lucifugus
ENSMOCG00000017142	Smarcad1	100	92.780	ENSNGAG00000000810	Smarcad1	100	92.780	Nannospalax_galili
ENSMOCG00000017142	Smarcad1	69	61.254	ENSNBRG00000012749	smarcad1a	85	60.979	Neolamprologus_brichardi
ENSMOCG00000017142	Smarcad1	100	93.177	ENSNLEG00000014225	SMARCAD1	100	97.148	Nomascus_leucogenys
ENSMOCG00000017142	Smarcad1	100	91.351	ENSODEG00000004334	SMARCAD1	100	91.351	Octodon_degus
ENSMOCG00000017142	Smarcad1	100	52.237	ENSONIG00000015059	smarcad1a	100	52.432	Oreochromis_niloticus
ENSMOCG00000017142	Smarcad1	80	82.971	ENSOANG00000013764	SMARCAD1	100	82.971	Ornithorhynchus_anatinus
ENSMOCG00000017142	Smarcad1	100	93.171	ENSOCUG00000017283	SMARCAD1	100	93.171	Oryctolagus_cuniculus
ENSMOCG00000017142	Smarcad1	65	65.211	ENSORLG00000004869	smarcad1a	64	63.947	Oryzias_latipes
ENSMOCG00000017142	Smarcad1	65	65.211	ENSORLG00020020569	smarcad1a	64	63.947	Oryzias_latipes_hni
ENSMOCG00000017142	Smarcad1	65	65.060	ENSORLG00015009045	smarcad1a	69	60.219	Oryzias_latipes_hsok
ENSMOCG00000017142	Smarcad1	65	65.113	ENSOMEG00000023032	smarcad1a	69	60.959	Oryzias_melastigma
ENSMOCG00000017142	Smarcad1	100	91.448	ENSOGAG00000011444	SMARCAD1	100	91.448	Otolemur_garnettii
ENSMOCG00000017142	Smarcad1	100	91.634	ENSOARG00000017851	SMARCAD1	100	91.634	Ovis_aries
ENSMOCG00000017142	Smarcad1	100	93.080	ENSPPAG00000035715	SMARCAD1	100	93.080	Pan_paniscus
ENSMOCG00000017142	Smarcad1	100	91.723	ENSPPRG00000024756	SMARCAD1	100	96.812	Panthera_pardus
ENSMOCG00000017142	Smarcad1	100	91.545	ENSPTIG00000017868	SMARCAD1	100	91.545	Panthera_tigris_altaica
ENSMOCG00000017142	Smarcad1	100	93.177	ENSPTRG00000023126	SMARCAD1	100	97.148	Pan_troglodytes
ENSMOCG00000017142	Smarcad1	100	91.545	ENSPANG00000019757	SMARCAD1	100	91.545	Papio_anubis
ENSMOCG00000017142	Smarcad1	100	70.734	ENSPSIG00000010255	SMARCAD1	100	71.333	Pelodiscus_sinensis
ENSMOCG00000017142	Smarcad1	63	63.764	ENSPMGG00000010735	smarcad1a	96	61.933	Periophthalmus_magnuspinnatus
ENSMOCG00000017142	Smarcad1	100	81.232	ENSPEMG00000001854	Smarcad1	100	81.152	Peromyscus_maniculatus_bairdii
ENSMOCG00000017142	Smarcad1	99	47.009	ENSPMAG00000003516	smarcad1a	99	46.981	Petromyzon_marinus
ENSMOCG00000017142	Smarcad1	77	85.714	ENSPCIG00000008137	SMARCAD1	98	87.225	Phascolarctos_cinereus
ENSMOCG00000017142	Smarcad1	94	66.459	ENSPFOG00000019116	smarcad1a	88	63.165	Poecilia_formosa
ENSMOCG00000017142	Smarcad1	63	66.303	ENSPLAG00000000108	smarcad1a	63	63.112	Poecilia_latipinna
ENSMOCG00000017142	Smarcad1	63	66.459	ENSPMEG00000009155	smarcad1a	63	63.256	Poecilia_mexicana
ENSMOCG00000017142	Smarcad1	94	66.927	ENSPREG00000018185	smarcad1a	84	66.927	Poecilia_reticulata
ENSMOCG00000017142	Smarcad1	100	92.600	ENSPPYG00000014935	SMARCAD1	100	92.600	Pongo_abelii
ENSMOCG00000017142	Smarcad1	73	93.770	ENSPCOG00000020478	SMARCAD1	89	93.770	Propithecus_coquereli
ENSMOCG00000017142	Smarcad1	100	90.379	ENSPVAG00000001760	SMARCAD1	100	90.379	Pteropus_vampyrus
ENSMOCG00000017142	Smarcad1	61	66.186	ENSPNYG00000010087	smarcad1a	85	60.168	Pundamilia_nyererei
ENSMOCG00000017142	Smarcad1	78	58.693	ENSPNAG00000010099	smarcad1b	84	59.824	Pygocentrus_nattereri
ENSMOCG00000017142	Smarcad1	100	50.094	ENSPNAG00000001663	smarcad1a	100	49.906	Pygocentrus_nattereri
ENSMOCG00000017142	Smarcad1	100	95.117	ENSRNOG00000006391	Smarcad1	100	95.117	Rattus_norvegicus
ENSMOCG00000017142	Smarcad1	100	92.885	ENSRBIG00000041989	SMARCAD1	100	92.885	Rhinopithecus_bieti
ENSMOCG00000017142	Smarcad1	100	92.885	ENSRROG00000035309	SMARCAD1	100	92.885	Rhinopithecus_roxellana
ENSMOCG00000017142	Smarcad1	100	92.982	ENSSBOG00000032114	SMARCAD1	100	97.315	Saimiri_boliviensis_boliviensis
ENSMOCG00000017142	Smarcad1	100	80.483	ENSSHAG00000001279	SMARCAD1	100	80.483	Sarcophilus_harrisii
ENSMOCG00000017142	Smarcad1	75	57.403	ENSSFOG00015020909	smarcad1a	100	57.403	Scleropages_formosus
ENSMOCG00000017142	Smarcad1	85	56.674	ENSSFOG00015016814	smarcad1b	100	51.434	Scleropages_formosus
ENSMOCG00000017142	Smarcad1	65	65.727	ENSSMAG00000001326	smarcad1a	65	63.546	Scophthalmus_maximus
ENSMOCG00000017142	Smarcad1	63	66.303	ENSSDUG00000022338	smarcad1a	87	60.082	Seriola_dumerili
ENSMOCG00000017142	Smarcad1	63	65.991	ENSSLDG00000024986	smarcad1a	68	59.809	Seriola_lalandi_dorsalis
ENSMOCG00000017142	Smarcad1	58	84.087	ENSSPUG00000004633	SMARCAD1	100	84.087	Sphenodon_punctatus
ENSMOCG00000017142	Smarcad1	69	62.518	ENSSPAG00000001970	smarcad1a	69	60.107	Stegastes_partitus
ENSMOCG00000017142	Smarcad1	100	92.315	ENSSSCG00000009193	SMARCAD1	100	93.936	Sus_scrofa
ENSMOCG00000017142	Smarcad1	76	77.255	ENSTGUG00000003127	SMARCAD1	100	77.510	Taeniopygia_guttata
ENSMOCG00000017142	Smarcad1	85	57.371	ENSTNIG00000017585	smarcad1a	99	57.583	Tetraodon_nigroviridis
ENSMOCG00000017142	Smarcad1	91	96.032	ENSTBEG00000002789	SMARCAD1	91	96.032	Tupaia_belangeri
ENSMOCG00000017142	Smarcad1	97	91.118	ENSTTRG00000000226	SMARCAD1	99	91.118	Tursiops_truncatus
ENSMOCG00000017142	Smarcad1	100	92.121	ENSUAMG00000022262	SMARCAD1	100	92.121	Ursus_americanus
ENSMOCG00000017142	Smarcad1	100	92.210	ENSUMAG00000004549	SMARCAD1	100	92.210	Ursus_maritimus
ENSMOCG00000017142	Smarcad1	100	92.218	ENSVVUG00000007271	SMARCAD1	100	93.817	Vulpes_vulpes
ENSMOCG00000017142	Smarcad1	84	65.455	ENSXETG00000019214	smarcad1	100	65.341	Xenopus_tropicalis
ENSMOCG00000017142	Smarcad1	74	59.025	ENSXCOG00000005232	smarcad1a	88	56.903	Xiphophorus_couchianus
ENSMOCG00000017142	Smarcad1	63	66.147	ENSXMAG00000015350	smarcad1a	58	66.147	Xiphophorus_maculatus