EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000017247 (Gene tree)
Gene ID: -
Gene Symbol: Rtl3
Alias: D430021I08Rik|Mar3|Mart3|ZHC5|Zcchc5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 1749 bases
Position: chrJH996495.1:382378-384126
Accession: 101990112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000019177	zf-CCHC	PF00098.23	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000022986	-	1614	XM_005369868	ENSMOCP00000019177	537 (aa)	XP_005369925	-

Gene Model

Click here to download ENSMOCG00000017247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000017247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000017247	Rtl3	99	51.013	ENSG00000179300	RTL3	99	51.193	Homo_sapiens
ENSMOCG00000017247	Rtl3	100	49.177	ENSTSYG00000008776	RTL3	100	49.177	Carlito_syrichta
ENSMOCG00000017247	Rtl3	100	76.449	ENSCGRG00001015952	Rtl3	100	76.449	Cricetulus_griseus_chok1gshd
ENSMOCG00000017247	Rtl3	100	56.318	ENSDORG00000029995	Rtl3	100	56.318	Dipodomys_ordii
ENSMOCG00000017247	Rtl3	100	52.962	ENSECAG00000029496	RTL3	100	51.332	Equus_caballus
ENSMOCG00000017247	Rtl3	100	54.690	ENSSTOG00000027152	RTL3	100	54.690	Ictidomys_tridecemlineatus
ENSMOCG00000017247	Rtl3	100	53.488	ENSJJAG00000014790	-	100	52.594	Jaculus_jaculus
ENSMOCG00000017247	Rtl3	100	75.543	ENSMAUG00000011823	Rtl3	100	75.543	Mesocricetus_auratus
ENSMOCG00000017247	Rtl3	100	51.906	ENSMICG00000004901	RTL3	100	51.906	Microcebus_murinus
ENSMOCG00000017247	Rtl3	100	73.084	MGP_CAROLIEiJ_G0033333	Rtl3	100	73.084	Mus_caroli
ENSMOCG00000017247	Rtl3	100	74.153	ENSMUSG00000047686	Rtl3	100	74.153	Mus_musculus
ENSMOCG00000017247	Rtl3	100	74.688	MGP_PahariEiJ_G0031869	Rtl3	100	74.688	Mus_pahari
ENSMOCG00000017247	Rtl3	100	74.153	MGP_SPRETEiJ_G0034497	Rtl3	100	74.153	Mus_spretus
ENSMOCG00000017247	Rtl3	100	62.304	ENSNGAG00000002851	Rtl3	100	61.606	Nannospalax_galili
ENSMOCG00000017247	Rtl3	100	56.304	ENSOCUG00000025689	RTL3	100	56.304	Oryctolagus_cuniculus
ENSMOCG00000017247	Rtl3	100	51.083	ENSPCOG00000016711	RTL3	100	52.952	Propithecus_coquereli
ENSMOCG00000017247	Rtl3	100	74.153	ENSRNOG00000002429	Rtl3	100	74.153	Rattus_norvegicus
ENSMOCG00000017247	Rtl3	100	51.287	ENSTBEG00000002464	RTL3	100	50.919	Tupaia_belangeri