EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000017836 (Gene tree)
Gene ID: 101993183
Gene Symbol: Shq1
Alias: 2810403P18Rik|Grim-1
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 110165 bases
Position: chrJH996431.1:14833355-14943519
Accession: 101993183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000020046	SHQ1	PF04925.15	6.5e-70	1	1
ENSMOCP00000020050	SHQ1	PF04925.15	6.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000023867	-	1362	-	ENSMOCP00000020050	453 (aa)	-	-
ENSMOCT00000023863	-	2038	XM_005364948	ENSMOCP00000020046	564 (aa)	XP_005365005	UPI00038BD1E1

Gene Model

Click here to download ENSMOCG00000017836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000017836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000017836	Shq1	98	85.656	ENSG00000144736	SHQ1	100	84.000	Homo_sapiens
ENSMOCG00000017836	Shq1	77	60.412	ENSAPOG00000000397	shq1	70	61.187	Acanthochromis_polyacanthus
ENSMOCG00000017836	Shq1	98	86.475	ENSAMEG00000015140	SHQ1	98	75.132	Ailuropoda_melanoleuca
ENSMOCG00000017836	Shq1	78	60.811	ENSACIG00000021249	shq1	88	54.762	Amphilophus_citrinellus
ENSMOCG00000017836	Shq1	79	60.889	ENSAOCG00000023311	shq1	73	60.965	Amphiprion_ocellaris
ENSMOCG00000017836	Shq1	79	60.667	ENSAPEG00000021686	shq1	73	60.746	Amphiprion_percula
ENSMOCG00000017836	Shq1	79	60.538	ENSATEG00000008475	shq1	72	60.987	Anabas_testudineus
ENSMOCG00000017836	Shq1	79	66.071	ENSAPLG00000013926	SHQ1	88	66.518	Anas_platyrhynchos
ENSMOCG00000017836	Shq1	67	78.378	ENSACAG00000014809	SHQ1	82	60.360	Anolis_carolinensis
ENSMOCG00000017836	Shq1	100	82.787	ENSANAG00000029241	SHQ1	100	74.870	Aotus_nancymaae
ENSMOCG00000017836	Shq1	97	58.082	ENSANAG00000030500	-	99	56.838	Aotus_nancymaae
ENSMOCG00000017836	Shq1	78	58.520	ENSACLG00000023077	shq1	79	54.706	Astatotilapia_calliptera
ENSMOCG00000017836	Shq1	76	55.787	ENSAMXG00000043822	shq1	74	56.881	Astyanax_mexicanus
ENSMOCG00000017836	Shq1	100	82.787	ENSBTAG00000005436	SHQ1	100	72.586	Bos_taurus
ENSMOCG00000017836	Shq1	77	33.108	WBGene00021655	Y48A5A.1	97	34.004	Caenorhabditis_elegans
ENSMOCG00000017836	Shq1	98	83.197	ENSCJAG00000015131	SHQ1	98	74.912	Callithrix_jacchus
ENSMOCG00000017836	Shq1	100	84.836	ENSCAFG00000006434	SHQ1	99	75.087	Canis_familiaris
ENSMOCG00000017836	Shq1	100	84.836	ENSCAFG00020016743	SHQ1	99	75.087	Canis_lupus_dingo
ENSMOCG00000017836	Shq1	100	82.377	ENSCHIG00000012271	SHQ1	91	72.241	Capra_hircus
ENSMOCG00000017836	Shq1	99	73.720	ENSTSYG00000014439	SHQ1	99	71.053	Carlito_syrichta
ENSMOCG00000017836	Shq1	90	64.355	ENSCAPG00000009343	SHQ1	97	85.897	Cavia_aperea
ENSMOCG00000017836	Shq1	98	83.607	ENSCPOG00000011443	SHQ1	99	73.162	Cavia_porcellus
ENSMOCG00000017836	Shq1	97	60.793	ENSCCAG00000036087	-	98	57.848	Cebus_capucinus
ENSMOCG00000017836	Shq1	98	64.223	ENSCCAG00000027080	SHQ1	98	65.785	Cebus_capucinus
ENSMOCG00000017836	Shq1	100	83.197	ENSCATG00000041238	SHQ1	100	73.966	Cercocebus_atys
ENSMOCG00000017836	Shq1	98	83.607	ENSCLAG00000004206	SHQ1	99	73.868	Chinchilla_lanigera
ENSMOCG00000017836	Shq1	80	77.419	ENSCSAG00000011514	SHQ1	100	70.672	Chlorocebus_sabaeus
ENSMOCG00000017836	Shq1	61	71.304	ENSCHOG00000003273	-	100	71.304	Choloepus_hoffmanni
ENSMOCG00000017836	Shq1	99	69.388	ENSCPBG00000006441	SHQ1	95	60.929	Chrysemys_picta_bellii
ENSMOCG00000017836	Shq1	63	59.091	ENSCING00000008013	-	95	41.950	Ciona_intestinalis
ENSMOCG00000017836	Shq1	63	62.791	ENSCSAVG00000002332	-	98	41.136	Ciona_savignyi
ENSMOCG00000017836	Shq1	99	83.197	ENSCANG00000039295	SHQ1	100	73.868	Colobus_angolensis_palliatus
ENSMOCG00000017836	Shq1	100	93.852	ENSCGRG00001012583	Shq1	100	93.852	Cricetulus_griseus_chok1gshd
ENSMOCG00000017836	Shq1	100	93.852	ENSCGRG00000009849	Shq1	100	93.852	Cricetulus_griseus_crigri
ENSMOCG00000017836	Shq1	74	61.722	ENSCSEG00000007829	shq1	70	61.486	Cynoglossus_semilaevis
ENSMOCG00000017836	Shq1	77	60.870	ENSCVAG00000020049	shq1	74	60.870	Cyprinodon_variegatus
ENSMOCG00000017836	Shq1	77	59.039	ENSDARG00000058522	shq1	75	57.174	Danio_rerio
ENSMOCG00000017836	Shq1	100	85.656	ENSDNOG00000033937	SHQ1	100	74.523	Dasypus_novemcinctus
ENSMOCG00000017836	Shq1	86	83.168	ENSETEG00000005766	SHQ1	96	63.339	Echinops_telfairi
ENSMOCG00000017836	Shq1	71	54.167	ENSEBUG00000005445	shq1	79	50.000	Eptatretus_burgeri
ENSMOCG00000017836	Shq1	100	85.656	ENSEASG00005002237	SHQ1	100	75.260	Equus_asinus_asinus
ENSMOCG00000017836	Shq1	99	86.066	ENSECAG00000015673	SHQ1	97	74.609	Equus_caballus
ENSMOCG00000017836	Shq1	98	79.918	ENSEEUG00000010568	SHQ1	98	72.887	Erinaceus_europaeus
ENSMOCG00000017836	Shq1	73	61.871	ENSELUG00000003476	shq1	81	59.079	Esox_lucius
ENSMOCG00000017836	Shq1	100	86.475	ENSFCAG00000012781	SHQ1	100	75.433	Felis_catus
ENSMOCG00000017836	Shq1	99	56.537	ENSFALG00000013428	SHQ1	72	68.707	Ficedula_albicollis
ENSMOCG00000017836	Shq1	98	82.377	ENSFDAG00000005595	SHQ1	91	70.370	Fukomys_damarensis
ENSMOCG00000017836	Shq1	77	60.137	ENSFHEG00000017552	shq1	73	60.137	Fundulus_heteroclitus
ENSMOCG00000017836	Shq1	58	73.171	ENSGMOG00000007350	shq1	100	57.935	Gadus_morhua
ENSMOCG00000017836	Shq1	78	69.388	ENSGALG00000007798	SHQ1	72	69.388	Gallus_gallus
ENSMOCG00000017836	Shq1	58	75.610	ENSGACG00000011797	shq1	100	60.202	Gasterosteus_aculeatus
ENSMOCG00000017836	Shq1	98	84.836	ENSGGOG00000034818	SHQ1	99	74.869	Gorilla_gorilla
ENSMOCG00000017836	Shq1	78	58.296	ENSHBUG00000010857	shq1	78	57.796	Haplochromis_burtoni
ENSMOCG00000017836	Shq1	98	84.426	ENSHGLG00000003637	SHQ1	91	71.210	Heterocephalus_glaber_female
ENSMOCG00000017836	Shq1	98	84.426	ENSHGLG00100011957	SHQ1	90	71.795	Heterocephalus_glaber_male
ENSMOCG00000017836	Shq1	77	57.931	ENSHCOG00000010799	shq1	73	59.268	Hippocampus_comes
ENSMOCG00000017836	Shq1	72	65.000	ENSIPUG00000001247	shq1	74	59.729	Ictalurus_punctatus
ENSMOCG00000017836	Shq1	98	81.557	ENSSTOG00000010043	SHQ1	100	72.711	Ictidomys_tridecemlineatus
ENSMOCG00000017836	Shq1	98	86.885	ENSJJAG00000017611	Shq1	99	86.885	Jaculus_jaculus
ENSMOCG00000017836	Shq1	78	60.674	ENSKMAG00000004457	shq1	75	61.074	Kryptolebias_marmoratus
ENSMOCG00000017836	Shq1	97	63.855	ENSLACG00000014243	SHQ1	86	54.261	Latimeria_chalumnae
ENSMOCG00000017836	Shq1	97	55.160	ENSLOCG00000009970	shq1	91	53.229	Lepisosteus_oculatus
ENSMOCG00000017836	Shq1	99	55.009	ENSMFAG00000037396	-	99	55.009	Macaca_fascicularis
ENSMOCG00000017836	Shq1	100	83.607	ENSMFAG00000039148	SHQ1	100	73.966	Macaca_fascicularis
ENSMOCG00000017836	Shq1	89	82.143	ENSMMUG00000009571	SHQ1	96	72.556	Macaca_mulatta
ENSMOCG00000017836	Shq1	99	54.833	ENSMMUG00000021761	-	99	54.833	Macaca_mulatta
ENSMOCG00000017836	Shq1	100	83.607	ENSMNEG00000032667	SHQ1	100	73.966	Macaca_nemestrina
ENSMOCG00000017836	Shq1	100	83.197	ENSMLEG00000038493	SHQ1	100	74.138	Mandrillus_leucophaeus
ENSMOCG00000017836	Shq1	78	61.298	ENSMAMG00000023432	shq1	68	61.298	Mastacembelus_armatus
ENSMOCG00000017836	Shq1	78	58.520	ENSMZEG00005008649	shq1	78	58.004	Maylandia_zebra
ENSMOCG00000017836	Shq1	78	67.574	ENSMGAG00000009640	SHQ1	73	67.800	Meleagris_gallopavo
ENSMOCG00000017836	Shq1	100	95.492	ENSMAUG00000022030	Shq1	100	95.492	Mesocricetus_auratus
ENSMOCG00000017836	Shq1	99	84.898	ENSMICG00000009224	SHQ1	99	74.655	Microcebus_murinus
ENSMOCG00000017836	Shq1	77	59.310	ENSMMOG00000010569	shq1	73	59.310	Mola_mola
ENSMOCG00000017836	Shq1	95	71.784	ENSMODG00000003926	SHQ1	99	62.657	Monodelphis_domestica
ENSMOCG00000017836	Shq1	78	61.224	ENSMALG00000008870	shq1	72	62.132	Monopterus_albus
ENSMOCG00000017836	Shq1	100	93.852	MGP_CAROLIEiJ_G0028689	Shq1	100	93.852	Mus_caroli
ENSMOCG00000017836	Shq1	100	93.852	ENSMUSG00000035378	Shq1	100	93.852	Mus_musculus
ENSMOCG00000017836	Shq1	100	92.623	MGP_PahariEiJ_G0022440	Shq1	100	92.623	Mus_pahari
ENSMOCG00000017836	Shq1	100	93.033	MGP_SPRETEiJ_G0029717	Shq1	100	93.033	Mus_spretus
ENSMOCG00000017836	Shq1	100	83.607	ENSMPUG00000017006	SHQ1	98	73.875	Mustela_putorius_furo
ENSMOCG00000017836	Shq1	88	71.784	ENSMLUG00000013539	SHQ1	98	70.115	Myotis_lucifugus
ENSMOCG00000017836	Shq1	97	88.750	ENSNGAG00000023317	Shq1	85	88.750	Nannospalax_galili
ENSMOCG00000017836	Shq1	63	56.863	ENSNBRG00000024004	shq1	75	56.378	Neolamprologus_brichardi
ENSMOCG00000017836	Shq1	98	86.475	ENSNLEG00000002731	SHQ1	99	76.091	Nomascus_leucogenys
ENSMOCG00000017836	Shq1	83	65.741	ENSMEUG00000009350	-	89	65.741	Notamacropus_eugenii
ENSMOCG00000017836	Shq1	99	71.503	ENSODEG00000009192	SHQ1	99	83.193	Octodon_degus
ENSMOCG00000017836	Shq1	78	58.296	ENSONIG00000020264	shq1	78	57.796	Oreochromis_niloticus
ENSMOCG00000017836	Shq1	97	85.294	ENSOCUG00000016695	SHQ1	98	75.130	Oryctolagus_cuniculus
ENSMOCG00000017836	Shq1	76	59.028	ENSORLG00000023538	shq1	80	58.202	Oryzias_latipes
ENSMOCG00000017836	Shq1	76	59.722	ENSORLG00020003697	shq1	79	58.876	Oryzias_latipes_hni
ENSMOCG00000017836	Shq1	76	59.491	ENSORLG00015021040	shq1	78	59.633	Oryzias_latipes_hsok
ENSMOCG00000017836	Shq1	76	60.417	ENSOMEG00000001225	shq1	80	59.243	Oryzias_melastigma
ENSMOCG00000017836	Shq1	98	83.806	ENSOGAG00000003898	SHQ1	100	73.077	Otolemur_garnettii
ENSMOCG00000017836	Shq1	100	81.301	ENSOARG00000009547	SHQ1	100	71.453	Ovis_aries
ENSMOCG00000017836	Shq1	98	85.656	ENSPPAG00000027714	SHQ1	99	74.869	Pan_paniscus
ENSMOCG00000017836	Shq1	99	58.464	ENSPPAG00000043263	-	99	57.417	Pan_paniscus
ENSMOCG00000017836	Shq1	100	86.475	ENSPPRG00000004769	SHQ1	100	74.957	Panthera_pardus
ENSMOCG00000017836	Shq1	98	79.487	ENSPTIG00000011478	SHQ1	100	70.669	Panthera_tigris_altaica
ENSMOCG00000017836	Shq1	99	57.941	ENSPTRG00000048303	-	99	56.894	Pan_troglodytes
ENSMOCG00000017836	Shq1	98	85.656	ENSPTRG00000015106	SHQ1	99	74.869	Pan_troglodytes
ENSMOCG00000017836	Shq1	100	83.197	ENSPANG00000002881	SHQ1	100	74.655	Papio_anubis
ENSMOCG00000017836	Shq1	65	70.270	ENSPKIG00000021517	shq1	76	57.763	Paramormyrops_kingsleyae
ENSMOCG00000017836	Shq1	99	69.038	ENSPSIG00000005536	SHQ1	95	60.413	Pelodiscus_sinensis
ENSMOCG00000017836	Shq1	79	57.753	ENSPMGG00000008838	shq1	76	57.428	Periophthalmus_magnuspinnatus
ENSMOCG00000017836	Shq1	100	95.902	ENSPEMG00000000251	Shq1	100	95.902	Peromyscus_maniculatus_bairdii
ENSMOCG00000017836	Shq1	78	55.928	ENSPMAG00000005372	shq1	99	56.152	Petromyzon_marinus
ENSMOCG00000017836	Shq1	77	58.998	ENSPFOG00000003118	shq1	81	58.352	Poecilia_formosa
ENSMOCG00000017836	Shq1	61	57.184	ENSPMEG00000011076	shq1	77	56.704	Poecilia_mexicana
ENSMOCG00000017836	Shq1	70	54.657	ENSPREG00000000591	shq1	73	57.908	Poecilia_reticulata
ENSMOCG00000017836	Shq1	98	84.016	ENSPPYG00000013717	SHQ1	99	74.520	Pongo_abelii
ENSMOCG00000017836	Shq1	95	83.607	ENSPCAG00000009035	SHQ1	99	72.408	Procavia_capensis
ENSMOCG00000017836	Shq1	98	84.211	ENSPCOG00000008415	SHQ1	99	75.087	Propithecus_coquereli
ENSMOCG00000017836	Shq1	98	84.016	ENSPVAG00000017392	SHQ1	99	75.176	Pteropus_vampyrus
ENSMOCG00000017836	Shq1	78	58.520	ENSPNYG00000003878	shq1	73	59.911	Pundamilia_nyererei
ENSMOCG00000017836	Shq1	76	60.829	ENSPNAG00000026840	shq1	71	60.959	Pygocentrus_nattereri
ENSMOCG00000017836	Shq1	100	94.262	ENSRNOG00000005433	Shq1	100	81.260	Rattus_norvegicus
ENSMOCG00000017836	Shq1	99	77.600	ENSRBIG00000026280	SHQ1	100	70.087	Rhinopithecus_bieti
ENSMOCG00000017836	Shq1	99	83.197	ENSRROG00000034126	SHQ1	100	73.868	Rhinopithecus_roxellana
ENSMOCG00000017836	Shq1	98	67.213	ENSSBOG00000021038	SHQ1	98	67.135	Saimiri_boliviensis_boliviensis
ENSMOCG00000017836	Shq1	93	74.583	ENSSHAG00000015077	SHQ1	99	62.172	Sarcophilus_harrisii
ENSMOCG00000017836	Shq1	78	62.557	ENSSFOG00015016241	shq1	91	54.244	Scleropages_formosus
ENSMOCG00000017836	Shq1	79	62.584	ENSSMAG00000016151	shq1	73	63.029	Scophthalmus_maximus
ENSMOCG00000017836	Shq1	82	59.322	ENSSDUG00000011986	shq1	78	58.776	Seriola_dumerili
ENSMOCG00000017836	Shq1	73	62.077	ENSSLDG00000013908	shq1	72	61.486	Seriola_lalandi_dorsalis
ENSMOCG00000017836	Shq1	98	66.667	ENSSARG00000007119	SHQ1	98	61.210	Sorex_araneus
ENSMOCG00000017836	Shq1	75	68.387	ENSSPUG00000011526	-	87	58.887	Sphenodon_punctatus
ENSMOCG00000017836	Shq1	99	81.148	ENSSSCG00000011518	SHQ1	99	71.777	Sus_scrofa
ENSMOCG00000017836	Shq1	79	68.080	ENSTGUG00000009933	SHQ1	77	68.080	Taeniopygia_guttata
ENSMOCG00000017836	Shq1	67	66.102	ENSTRUG00000009446	shq1	75	56.920	Takifugu_rubripes
ENSMOCG00000017836	Shq1	73	55.529	ENSTNIG00000007354	shq1	97	55.157	Tetraodon_nigroviridis
ENSMOCG00000017836	Shq1	72	91.489	ENSTBEG00000011295	SHQ1	78	91.489	Tupaia_belangeri
ENSMOCG00000017836	Shq1	96	83.607	ENSTTRG00000005320	SHQ1	98	75.177	Tursiops_truncatus
ENSMOCG00000017836	Shq1	94	86.087	ENSUMAG00000024031	SHQ1	98	73.322	Ursus_maritimus
ENSMOCG00000017836	Shq1	91	62.852	ENSVPAG00000004880	SHQ1	100	62.852	Vicugna_pacos
ENSMOCG00000017836	Shq1	100	84.836	ENSVVUG00000013906	SHQ1	99	74.913	Vulpes_vulpes
ENSMOCG00000017836	Shq1	79	65.169	ENSXETG00000032215	shq1	72	65.169	Xenopus_tropicalis