EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000017961 (Gene tree)
Gene ID: 101993795
Gene Symbol: Zfp39
Alias: CTfin33|Zfp-39
Full Name: zinc finger protein 39-like
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 14144 bases
Position: chr7:39728520-39742663
Accession: 101993795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000020209	zf-C2H2	PF00096.26	5.3e-54	1	10
ENSMOCP00000020209	zf-C2H2	PF00096.26	5.3e-54	2	10
ENSMOCP00000020209	zf-C2H2	PF00096.26	5.3e-54	3	10
ENSMOCP00000020209	zf-C2H2	PF00096.26	5.3e-54	4	10
ENSMOCP00000020209	zf-C2H2	PF00096.26	5.3e-54	5	10
ENSMOCP00000020209	zf-C2H2	PF00096.26	5.3e-54	6	10
ENSMOCP00000020209	zf-C2H2	PF00096.26	5.3e-54	7	10
ENSMOCP00000020209	zf-C2H2	PF00096.26	5.3e-54	8	10
ENSMOCP00000020209	zf-C2H2	PF00096.26	5.3e-54	9	10
ENSMOCP00000020209	zf-C2H2	PF00096.26	5.3e-54	10	10
ENSMOCP00000020209	zf-met	PF12874.7	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000024030	-	2100	XM_013347075	ENSMOCP00000020209	699 (aa)	XP_013202529	-

Gene Model

Click here to download ENSMOCG00000017961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000017961's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000017961	Zfp39	93	49.235	ENSMOCG00000007851	-	99	49.235
ENSMOCG00000017961	Zfp39	63	39.437	ENSMOCG00000022870	Zfp236	67	42.308
ENSMOCG00000017961	Zfp39	94	45.897	ENSMOCG00000006946	Zfp53	97	45.897
ENSMOCG00000017961	Zfp39	70	48.828	ENSMOCG00000000365	-	94	48.828
ENSMOCG00000017961	Zfp39	93	51.579	ENSMOCG00000017127	-	98	51.579
ENSMOCG00000017961	Zfp39	94	52.366	ENSMOCG00000021383	Zfp251	97	52.366
ENSMOCG00000017961	Zfp39	74	37.037	ENSMOCG00000002689	Zfp423	96	33.898
ENSMOCG00000017961	Zfp39	60	35.417	ENSMOCG00000003611	Maz	58	33.193
ENSMOCG00000017961	Zfp39	79	60.714	ENSMOCG00000003394	-	69	60.714
ENSMOCG00000017961	Zfp39	94	45.995	ENSMOCG00000003692	Zfp354a	98	48.657
ENSMOCG00000017961	Zfp39	93	44.745	ENSMOCG00000000804	Zfp317	89	44.745
ENSMOCG00000017961	Zfp39	94	44.054	ENSMOCG00000020165	Zfp101	98	44.054
ENSMOCG00000017961	Zfp39	96	44.186	ENSMOCG00000014774	Zfp961	99	44.186
ENSMOCG00000017961	Zfp39	60	51.327	ENSMOCG00000002904	Zfp768	51	49.296
ENSMOCG00000017961	Zfp39	67	60.000	ENSMOCG00000017799	-	80	60.000
ENSMOCG00000017961	Zfp39	60	39.450	ENSMOCG00000004895	Zfp64	73	36.420
ENSMOCG00000017961	Zfp39	94	49.470	ENSMOCG00000007908	Zfp560	87	50.427
ENSMOCG00000017961	Zfp39	94	51.502	ENSMOCG00000002167	Zfp712	99	51.502
ENSMOCG00000017961	Zfp39	67	35.312	ENSMOCG00000016267	Prdm5	76	39.172
ENSMOCG00000017961	Zfp39	94	46.779	ENSMOCG00000001762	-	98	60.465
ENSMOCG00000017961	Zfp39	59	44.792	ENSMOCG00000006225	Wt1	57	41.525
ENSMOCG00000017961	Zfp39	94	59.535	ENSMOCG00000002761	Zfp1	86	59.535
ENSMOCG00000017961	Zfp39	60	31.982	ENSMOCG00000009299	Zfp784	68	33.173
ENSMOCG00000017961	Zfp39	62	32.067	ENSMOCG00000016268	Zfp574	71	34.684
ENSMOCG00000017961	Zfp39	93	44.068	ENSMOCG00000007791	-	82	49.254
ENSMOCG00000017961	Zfp39	62	34.891	ENSMOCG00000005503	Zfp319	94	33.645
ENSMOCG00000017961	Zfp39	70	33.624	ENSMOCG00000021124	Repin1	79	44.545
ENSMOCG00000017961	Zfp39	60	37.812	ENSMOCG00000005017	Zbtb17	55	37.812
ENSMOCG00000017961	Zfp39	72	37.226	ENSMOCG00000003536	Snai3	52	37.226
ENSMOCG00000017961	Zfp39	60	43.284	ENSMOCG00000004478	-	100	43.284
ENSMOCG00000017961	Zfp39	51	37.956	ENSMOCG00000006622	Snai2	50	37.956
ENSMOCG00000017961	Zfp39	60	38.889	ENSMOCG00000020296	Zfp628	58	36.979
ENSMOCG00000017961	Zfp39	94	46.919	ENSMOCG00000015724	Zfp26	98	46.919

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000017961	Zfp39	93	58.030	ENSCPOG00000036704	-	99	58.030	Cavia_porcellus
ENSMOCG00000017961	Zfp39	99	83.217	ENSCGRG00001002406	Zfp39	99	83.217	Cricetulus_griseus_chok1gshd
ENSMOCG00000017961	Zfp39	99	83.077	ENSCGRG00000002730	Zfp39	99	83.077	Cricetulus_griseus_crigri
ENSMOCG00000017961	Zfp39	98	69.397	ENSJJAG00000018925	Zfp39	98	69.397	Jaculus_jaculus
ENSMOCG00000017961	Zfp39	99	83.595	ENSMAUG00000001536	Zfp39	98	83.595	Mesocricetus_auratus
ENSMOCG00000017961	Zfp39	96	78.940	MGP_PahariEiJ_G0017548	Zfp39	99	76.783	Mus_pahari
ENSMOCG00000017961	Zfp39	99	66.899	ENSNGAG00000019853	Zfp39	99	66.899	Nannospalax_galili
ENSMOCG00000017961	Zfp39	60	77.333	ENSODEG00000000805	-	100	77.333	Octodon_degus
ENSMOCG00000017961	Zfp39	99	84.755	ENSPEMG00000009428	Zfp39	99	84.755	Peromyscus_maniculatus_bairdii
ENSMOCG00000017961	Zfp39	99	76.643	ENSRNOG00000014712	Zfp39	99	76.643	Rattus_norvegicus