EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000017969 (Gene tree)
Gene ID: 101980672
Gene Symbol: Cnot1
Alias: 6030411K04Rik
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 80126 bases
Position: chr4:13451730-13531855
Accession: 101980672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000020263	Not1	PF04054.15	9e-153	1	1
ENSMOCP00000020259	Not1	PF04054.15	9.2e-153	1	1
ENSMOCP00000020269	Not1	PF04054.15	1.3e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000024081	-	7664	XM_005345548	ENSMOCP00000020259	2376 (aa)	XP_005345605	UPI00038BED29
ENSMOCT00000024091	-	6981	-	ENSMOCP00000020269	2326 (aa)	-	UPI00038C24A7
ENSMOCT00000024085	-	7035	-	ENSMOCP00000020263	2344 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000017969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000017969's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000017969	Cnot1	100	99.369	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSMOCG00000017969	Cnot1	97	96.774	ENSAPOG00000005042	cnot1	100	96.774	Acanthochromis_polyacanthus
ENSMOCG00000017969	Cnot1	100	99.285	ENSAMEG00000017298	CNOT1	100	99.285	Ailuropoda_melanoleuca
ENSMOCG00000017969	Cnot1	91	89.655	ENSACIG00000016003	cnot1	100	89.981	Amphilophus_citrinellus
ENSMOCG00000017969	Cnot1	100	90.386	ENSAPEG00000022342	cnot1	100	90.512	Amphiprion_percula
ENSMOCG00000017969	Cnot1	97	96.914	ENSATEG00000012892	cnot1	100	96.914	Anabas_testudineus
ENSMOCG00000017969	Cnot1	100	97.395	ENSAPLG00000007162	CNOT1	100	97.395	Anas_platyrhynchos
ENSMOCG00000017969	Cnot1	92	95.733	ENSACAG00000001602	CNOT1	98	95.965	Anolis_carolinensis
ENSMOCG00000017969	Cnot1	100	97.979	ENSANAG00000038198	CNOT1	100	97.979	Aotus_nancymaae
ENSMOCG00000017969	Cnot1	97	96.914	ENSACLG00000014234	cnot1	100	96.914	Astatotilapia_calliptera
ENSMOCG00000017969	Cnot1	100	90.745	ENSAMXG00000013170	cnot1	100	91.253	Astyanax_mexicanus
ENSMOCG00000017969	Cnot1	100	99.453	ENSBTAG00000020782	CNOT1	100	99.453	Bos_taurus
ENSMOCG00000017969	Cnot1	83	40.442	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSMOCG00000017969	Cnot1	100	99.327	ENSCJAG00000011318	CNOT1	100	99.327	Callithrix_jacchus
ENSMOCG00000017969	Cnot1	100	99.118	ENSCAFG00000008426	CNOT1	100	99.118	Canis_familiaris
ENSMOCG00000017969	Cnot1	100	99.398	ENSCAFG00020010156	CNOT1	100	99.398	Canis_lupus_dingo
ENSMOCG00000017969	Cnot1	100	99.453	ENSCHIG00000010452	CNOT1	100	99.453	Capra_hircus
ENSMOCG00000017969	Cnot1	100	99.495	ENSTSYG00000006888	CNOT1	100	99.495	Carlito_syrichta
ENSMOCG00000017969	Cnot1	100	94.865	ENSCPOG00000013026	CNOT1	100	94.865	Cavia_porcellus
ENSMOCG00000017969	Cnot1	100	97.769	ENSCCAG00000026333	CNOT1	100	97.769	Cebus_capucinus
ENSMOCG00000017969	Cnot1	100	99.411	ENSCATG00000032625	CNOT1	100	99.411	Cercocebus_atys
ENSMOCG00000017969	Cnot1	100	99.537	ENSCLAG00000006289	CNOT1	100	99.537	Chinchilla_lanigera
ENSMOCG00000017969	Cnot1	100	99.411	ENSCSAG00000004731	CNOT1	100	99.411	Chlorocebus_sabaeus
ENSMOCG00000017969	Cnot1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSMOCG00000017969	Cnot1	98	95.530	ENSCPBG00000026222	CNOT1	99	98.472	Chrysemys_picta_bellii
ENSMOCG00000017969	Cnot1	100	58.953	ENSCING00000009149	-	100	58.427	Ciona_intestinalis
ENSMOCG00000017969	Cnot1	90	62.973	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSMOCG00000017969	Cnot1	100	97.560	ENSCANG00000040534	CNOT1	100	97.560	Colobus_angolensis_palliatus
ENSMOCG00000017969	Cnot1	100	99.790	ENSCGRG00001016365	Cnot1	100	99.790	Cricetulus_griseus_chok1gshd
ENSMOCG00000017969	Cnot1	100	99.790	ENSCGRG00000001714	Cnot1	100	99.790	Cricetulus_griseus_crigri
ENSMOCG00000017969	Cnot1	100	82.854	ENSCVAG00000018930	cnot1	100	82.728	Cyprinodon_variegatus
ENSMOCG00000017969	Cnot1	100	89.816	ENSDARG00000004174	cnot1	100	89.774	Danio_rerio
ENSMOCG00000017969	Cnot1	100	96.887	ENSDNOG00000013250	CNOT1	100	96.887	Dasypus_novemcinctus
ENSMOCG00000017969	Cnot1	99	46.190	FBgn0085436	Not1	99	47.993	Drosophila_melanogaster
ENSMOCG00000017969	Cnot1	84	97.440	ENSETEG00000012806	CNOT1	84	97.440	Echinops_telfairi
ENSMOCG00000017969	Cnot1	81	82.212	ENSEBUG00000011534	cnot1	95	82.212	Eptatretus_burgeri
ENSMOCG00000017969	Cnot1	97	99.259	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSMOCG00000017969	Cnot1	100	99.579	ENSECAG00000009889	CNOT1	100	99.579	Equus_caballus
ENSMOCG00000017969	Cnot1	90	98.903	ENSEEUG00000006015	CNOT1	90	98.903	Erinaceus_europaeus
ENSMOCG00000017969	Cnot1	100	89.570	ENSELUG00000014085	cnot1	100	89.293	Esox_lucius
ENSMOCG00000017969	Cnot1	100	99.287	ENSFCAG00000025155	CNOT1	100	99.287	Felis_catus
ENSMOCG00000017969	Cnot1	100	97.433	ENSFALG00000007285	CNOT1	100	97.433	Ficedula_albicollis
ENSMOCG00000017969	Cnot1	100	99.453	ENSFDAG00000013399	CNOT1	100	99.453	Fukomys_damarensis
ENSMOCG00000017969	Cnot1	100	90.130	ENSFHEG00000020574	cnot1	100	90.130	Fundulus_heteroclitus
ENSMOCG00000017969	Cnot1	92	89.471	ENSGMOG00000012864	cnot1	100	89.842	Gadus_morhua
ENSMOCG00000017969	Cnot1	100	97.475	ENSGALG00000002301	CNOT1	100	97.475	Gallus_gallus
ENSMOCG00000017969	Cnot1	100	89.001	ENSGAFG00000015005	cnot1	100	88.959	Gambusia_affinis
ENSMOCG00000017969	Cnot1	92	90.172	ENSGACG00000002606	cnot1	100	95.631	Gasterosteus_aculeatus
ENSMOCG00000017969	Cnot1	100	97.518	ENSGAGG00000022646	CNOT1	100	97.518	Gopherus_agassizii
ENSMOCG00000017969	Cnot1	100	99.327	ENSGGOG00000009547	CNOT1	100	99.327	Gorilla_gorilla
ENSMOCG00000017969	Cnot1	97	96.914	ENSHBUG00000001729	cnot1	100	96.914	Haplochromis_burtoni
ENSMOCG00000017969	Cnot1	100	99.369	ENSHGLG00000014322	CNOT1	100	99.369	Heterocephalus_glaber_female
ENSMOCG00000017969	Cnot1	100	89.172	ENSHCOG00000006501	cnot1	100	89.311	Hippocampus_comes
ENSMOCG00000017969	Cnot1	100	88.674	ENSIPUG00000011915	cnot1	100	89.136	Ictalurus_punctatus
ENSMOCG00000017969	Cnot1	100	99.453	ENSSTOG00000005490	CNOT1	100	99.453	Ictidomys_tridecemlineatus
ENSMOCG00000017969	Cnot1	100	98.925	ENSJJAG00000000633	Cnot1	100	98.925	Jaculus_jaculus
ENSMOCG00000017969	Cnot1	100	90.004	ENSKMAG00000006149	cnot1	100	89.883	Kryptolebias_marmoratus
ENSMOCG00000017969	Cnot1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSMOCG00000017969	Cnot1	100	94.823	ENSLACG00000010869	CNOT1	100	94.823	Latimeria_chalumnae
ENSMOCG00000017969	Cnot1	100	92.743	ENSLOCG00000006324	cnot1	100	92.785	Lepisosteus_oculatus
ENSMOCG00000017969	Cnot1	100	99.327	ENSLAFG00000000098	CNOT1	100	99.327	Loxodonta_africana
ENSMOCG00000017969	Cnot1	100	99.398	ENSMFAG00000035888	CNOT1	100	99.398	Macaca_fascicularis
ENSMOCG00000017969	Cnot1	100	99.369	ENSMMUG00000014625	CNOT1	100	99.369	Macaca_mulatta
ENSMOCG00000017969	Cnot1	100	96.819	ENSMNEG00000031820	CNOT1	100	99.393	Macaca_nemestrina
ENSMOCG00000017969	Cnot1	100	98.194	ENSMLEG00000040933	CNOT1	100	98.194	Mandrillus_leucophaeus
ENSMOCG00000017969	Cnot1	100	89.299	ENSMAMG00000016524	cnot1	100	89.295	Mastacembelus_armatus
ENSMOCG00000017969	Cnot1	97	96.914	ENSMZEG00005016210	cnot1	100	96.914	Maylandia_zebra
ENSMOCG00000017969	Cnot1	100	97.222	ENSMGAG00000001908	CNOT1	100	97.222	Meleagris_gallopavo
ENSMOCG00000017969	Cnot1	100	99.285	ENSMICG00000007071	CNOT1	100	99.285	Microcebus_murinus
ENSMOCG00000017969	Cnot1	97	93.548	ENSMMOG00000019134	cnot1	100	93.548	Mola_mola
ENSMOCG00000017969	Cnot1	100	97.602	ENSMODG00000014199	CNOT1	100	97.602	Monodelphis_domestica
ENSMOCG00000017969	Cnot1	100	90.004	ENSMALG00000008645	cnot1	100	90.046	Monopterus_albus
ENSMOCG00000017969	Cnot1	97	100.000	MGP_CAROLIEiJ_G0031430	Cnot1	92	100.000	Mus_caroli
ENSMOCG00000017969	Cnot1	100	99.874	ENSMUSG00000036550	Cnot1	100	99.874	Mus_musculus
ENSMOCG00000017969	Cnot1	100	99.832	MGP_PahariEiJ_G0023028	Cnot1	100	99.832	Mus_pahari
ENSMOCG00000017969	Cnot1	100	99.874	MGP_SPRETEiJ_G0032549	Cnot1	100	99.874	Mus_spretus
ENSMOCG00000017969	Cnot1	100	99.579	ENSMPUG00000004830	CNOT1	100	99.579	Mustela_putorius_furo
ENSMOCG00000017969	Cnot1	100	98.906	ENSMLUG00000003728	CNOT1	100	98.906	Myotis_lucifugus
ENSMOCG00000017969	Cnot1	100	99.579	ENSNGAG00000018628	Cnot1	100	99.579	Nannospalax_galili
ENSMOCG00000017969	Cnot1	94	96.914	ENSNBRG00000019358	cnot1	100	96.914	Neolamprologus_brichardi
ENSMOCG00000017969	Cnot1	100	99.312	ENSNLEG00000003566	CNOT1	100	99.312	Nomascus_leucogenys
ENSMOCG00000017969	Cnot1	86	97.763	ENSMEUG00000006145	CNOT1	87	97.763	Notamacropus_eugenii
ENSMOCG00000017969	Cnot1	87	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSMOCG00000017969	Cnot1	100	99.411	ENSODEG00000016337	CNOT1	100	99.411	Octodon_degus
ENSMOCG00000017969	Cnot1	100	90.369	ENSONIG00000007358	cnot1	100	89.962	Oreochromis_niloticus
ENSMOCG00000017969	Cnot1	92	98.089	ENSOANG00000012109	CNOT1	100	98.119	Ornithorhynchus_anatinus
ENSMOCG00000017969	Cnot1	100	99.411	ENSOCUG00000006911	CNOT1	100	99.411	Oryctolagus_cuniculus
ENSMOCG00000017969	Cnot1	100	90.398	ENSORLG00000013734	cnot1	100	90.352	Oryzias_latipes
ENSMOCG00000017969	Cnot1	100	90.691	ENSORLG00020017012	cnot1	100	90.446	Oryzias_latipes_hni
ENSMOCG00000017969	Cnot1	100	90.519	ENSORLG00015007091	cnot1	100	90.017	Oryzias_latipes_hsok
ENSMOCG00000017969	Cnot1	100	89.841	ENSOMEG00000015124	cnot1	100	90.094	Oryzias_melastigma
ENSMOCG00000017969	Cnot1	100	99.327	ENSOGAG00000000543	CNOT1	100	99.327	Otolemur_garnettii
ENSMOCG00000017969	Cnot1	100	99.453	ENSOARG00000001567	CNOT1	100	99.453	Ovis_aries
ENSMOCG00000017969	Cnot1	100	99.369	ENSPPAG00000022013	CNOT1	100	99.369	Pan_paniscus
ENSMOCG00000017969	Cnot1	100	99.579	ENSPPRG00000004867	CNOT1	100	99.579	Panthera_pardus
ENSMOCG00000017969	Cnot1	100	99.579	ENSPTIG00000012589	CNOT1	100	99.579	Panthera_tigris_altaica
ENSMOCG00000017969	Cnot1	100	99.355	ENSPTRG00000008183	CNOT1	100	99.355	Pan_troglodytes
ENSMOCG00000017969	Cnot1	100	95.935	ENSPANG00000020901	CNOT1	100	95.935	Papio_anubis
ENSMOCG00000017969	Cnot1	100	92.027	ENSPKIG00000023538	CNOT1	100	92.195	Paramormyrops_kingsleyae
ENSMOCG00000017969	Cnot1	97	93.118	ENSPKIG00000002914	CNOT1	99	93.118	Paramormyrops_kingsleyae
ENSMOCG00000017969	Cnot1	100	97.391	ENSPSIG00000005499	CNOT1	100	97.391	Pelodiscus_sinensis
ENSMOCG00000017969	Cnot1	100	81.208	ENSPMAG00000009381	cnot1	100	81.108	Petromyzon_marinus
ENSMOCG00000017969	Cnot1	100	97.509	ENSPCIG00000007343	CNOT1	100	98.472	Phascolarctos_cinereus
ENSMOCG00000017969	Cnot1	99	89.642	ENSPFOG00000003497	cnot1	100	89.641	Poecilia_formosa
ENSMOCG00000017969	Cnot1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSMOCG00000017969	Cnot1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSMOCG00000017969	Cnot1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSMOCG00000017969	Cnot1	100	99.327	ENSPPYG00000007410	CNOT1	100	99.327	Pongo_abelii
ENSMOCG00000017969	Cnot1	90	97.274	ENSPCAG00000003241	CNOT1	90	97.274	Procavia_capensis
ENSMOCG00000017969	Cnot1	100	99.312	ENSPCOG00000027139	CNOT1	100	99.312	Propithecus_coquereli
ENSMOCG00000017969	Cnot1	100	96.928	ENSPVAG00000004243	CNOT1	100	96.928	Pteropus_vampyrus
ENSMOCG00000017969	Cnot1	97	96.914	ENSPNYG00000012919	cnot1	100	96.914	Pundamilia_nyererei
ENSMOCG00000017969	Cnot1	100	89.693	ENSPNAG00000000246	cnot1	100	90.114	Pygocentrus_nattereri
ENSMOCG00000017969	Cnot1	100	99.790	ENSRNOG00000012271	Cnot1	100	99.790	Rattus_norvegicus
ENSMOCG00000017969	Cnot1	100	97.291	ENSRBIG00000044598	CNOT1	100	97.291	Rhinopithecus_bieti
ENSMOCG00000017969	Cnot1	100	99.411	ENSRROG00000000906	CNOT1	100	99.411	Rhinopithecus_roxellana
ENSMOCG00000017969	Cnot1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSMOCG00000017969	Cnot1	100	95.111	ENSSBOG00000029155	CNOT1	100	95.111	Saimiri_boliviensis_boliviensis
ENSMOCG00000017969	Cnot1	100	97.771	ENSSHAG00000012187	CNOT1	100	97.771	Sarcophilus_harrisii
ENSMOCG00000017969	Cnot1	100	92.377	ENSSFOG00015017614	cnot1	100	92.117	Scleropages_formosus
ENSMOCG00000017969	Cnot1	97	96.914	ENSSMAG00000013844	cnot1	100	96.914	Scophthalmus_maximus
ENSMOCG00000017969	Cnot1	97	96.774	ENSSDUG00000021491	cnot1	100	96.774	Seriola_dumerili
ENSMOCG00000017969	Cnot1	97	96.774	ENSSLDG00000014816	cnot1	100	96.774	Seriola_lalandi_dorsalis
ENSMOCG00000017969	Cnot1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSMOCG00000017969	Cnot1	100	90.390	ENSSPAG00000018802	cnot1	100	90.180	Stegastes_partitus
ENSMOCG00000017969	Cnot1	100	99.369	ENSSSCG00000002799	CNOT1	100	99.369	Sus_scrofa
ENSMOCG00000017969	Cnot1	100	97.310	ENSTGUG00000005919	CNOT1	100	97.310	Taeniopygia_guttata
ENSMOCG00000017969	Cnot1	100	88.903	ENSTNIG00000018706	cnot1	100	88.667	Tetraodon_nigroviridis
ENSMOCG00000017969	Cnot1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSMOCG00000017969	Cnot1	95	99.242	ENSTTRG00000008460	CNOT1	95	99.242	Tursiops_truncatus
ENSMOCG00000017969	Cnot1	100	99.579	ENSUAMG00000009251	CNOT1	100	99.579	Ursus_americanus
ENSMOCG00000017969	Cnot1	100	99.579	ENSUMAG00000021291	CNOT1	100	99.579	Ursus_maritimus
ENSMOCG00000017969	Cnot1	97	96.809	ENSVPAG00000008846	CNOT1	97	96.809	Vicugna_pacos
ENSMOCG00000017969	Cnot1	100	98.365	ENSVVUG00000024037	CNOT1	100	98.974	Vulpes_vulpes
ENSMOCG00000017969	Cnot1	100	89.966	ENSXETG00000015900	cnot1	100	89.757	Xenopus_tropicalis
ENSMOCG00000017969	Cnot1	100	89.169	ENSXCOG00000013552	cnot1	100	89.127	Xiphophorus_couchianus
ENSMOCG00000017969	Cnot1	100	89.211	ENSXMAG00000006031	cnot1	100	89.169	Xiphophorus_maculatus