EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000017998 (Gene tree)
Gene ID: 102001415
Gene Symbol: Zfhx3
Alias: A230102L03Rik|Atbf1|Sci|WBP9
Full Name: zinc finger homeobox 3
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 159653 bases
Position: chr4:18901001-19060653
Accession: 102001415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000020268	zf-C2H2	PF00096.26	1.6e-12	1	2
ENSMOCP00000020268	zf-C2H2	PF00096.26	1.6e-12	2	2
ENSMOCP00000020261	zf-C2H2	PF00096.26	1.7e-12	1	2
ENSMOCP00000020261	zf-C2H2	PF00096.26	1.7e-12	2	2
ENSMOCP00000020268	zf-met	PF12874.7	6.4e-06	1	1
ENSMOCP00000020261	zf-met	PF12874.7	6.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000024083	-	15427	XM_005345704	ENSMOCP00000020261	3701 (aa)	XP_005345761	UPI00038BC29E
ENSMOCT00000024090	-	11079	-	ENSMOCP00000020268	3692 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000017998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000017998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000017998	Zfhx3	100	52.148	ENSMOCG00000021103	Zfhx4	53	51.144

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000017998	Zfhx3	100	93.925	ENSG00000140836	ZFHX3	100	93.387	Homo_sapiens
ENSMOCG00000017998	Zfhx3	100	91.805	ENSAMEG00000002197	ZFHX3	100	92.842	Ailuropoda_melanoleuca
ENSMOCG00000017998	Zfhx3	97	64.290	ENSATEG00000004640	zfhx3	87	65.298	Anabas_testudineus
ENSMOCG00000017998	Zfhx3	95	85.524	ENSAPLG00000002327	ZFHX3	99	85.666	Anas_platyrhynchos
ENSMOCG00000017998	Zfhx3	100	93.109	ENSANAG00000033325	ZFHX3	100	93.405	Aotus_nancymaae
ENSMOCG00000017998	Zfhx3	100	62.566	ENSACLG00000001914	zfhx3	100	62.880	Astatotilapia_calliptera
ENSMOCG00000017998	Zfhx3	86	66.034	ENSAMXG00000004340	zfhx3	100	63.007	Astyanax_mexicanus
ENSMOCG00000017998	Zfhx3	100	91.694	ENSBTAG00000014636	ZFHX3	100	92.742	Bos_taurus
ENSMOCG00000017998	Zfhx3	100	93.898	ENSCJAG00000043080	ZFHX3	100	93.683	Callithrix_jacchus
ENSMOCG00000017998	Zfhx3	100	93.010	ENSCAFG00000020243	ZFHX3	100	92.689	Canis_familiaris
ENSMOCG00000017998	Zfhx3	100	92.941	ENSCAFG00020020336	ZFHX3	100	93.103	Canis_lupus_dingo
ENSMOCG00000017998	Zfhx3	100	91.707	ENSCHIG00000018446	ZFHX3	100	92.295	Capra_hircus
ENSMOCG00000017998	Zfhx3	100	91.750	ENSTSYG00000029930	ZFHX3	100	91.857	Carlito_syrichta
ENSMOCG00000017998	Zfhx3	94	100.000	ENSCAPG00000010889	ZFHX3	99	98.305	Cavia_aperea
ENSMOCG00000017998	Zfhx3	100	92.709	ENSCPOG00000009111	ZFHX3	100	92.368	Cavia_porcellus
ENSMOCG00000017998	Zfhx3	100	92.986	ENSCCAG00000026346	ZFHX3	100	93.310	Cebus_capucinus
ENSMOCG00000017998	Zfhx3	100	93.590	ENSCATG00000022545	ZFHX3	100	93.637	Cercocebus_atys
ENSMOCG00000017998	Zfhx3	100	93.678	ENSCLAG00000007000	ZFHX3	100	93.335	Chinchilla_lanigera
ENSMOCG00000017998	Zfhx3	100	93.371	ENSCSAG00000004171	ZFHX3	100	94.099	Chlorocebus_sabaeus
ENSMOCG00000017998	Zfhx3	100	94.308	ENSCANG00000034216	ZFHX3	100	94.281	Colobus_angolensis_palliatus
ENSMOCG00000017998	Zfhx3	100	97.123	ENSCGRG00001012831	Zfhx3	100	97.123	Cricetulus_griseus_chok1gshd
ENSMOCG00000017998	Zfhx3	100	95.783	ENSCGRG00000001001	Zfhx3	100	95.783	Cricetulus_griseus_crigri
ENSMOCG00000017998	Zfhx3	83	65.609	ENSCSEG00000001762	zfhx3	95	62.760	Cynoglossus_semilaevis
ENSMOCG00000017998	Zfhx3	100	92.780	ENSDNOG00000046047	ZFHX3	100	92.134	Dasypus_novemcinctus
ENSMOCG00000017998	Zfhx3	100	93.681	ENSEASG00005021387	ZFHX3	100	93.602	Equus_asinus_asinus
ENSMOCG00000017998	Zfhx3	100	93.656	ENSECAG00000022984	ZFHX3	100	94.062	Equus_caballus
ENSMOCG00000017998	Zfhx3	84	91.458	ENSEEUG00000008705	ZFHX3	92	91.222	Erinaceus_europaeus
ENSMOCG00000017998	Zfhx3	86	65.918	ENSELUG00000014311	zfhx3	100	62.874	Esox_lucius
ENSMOCG00000017998	Zfhx3	100	93.378	ENSFCAG00000023839	ZFHX3	100	93.720	Felis_catus
ENSMOCG00000017998	Zfhx3	96	86.958	ENSFALG00000002706	ZFHX3	98	84.222	Ficedula_albicollis
ENSMOCG00000017998	Zfhx3	100	92.767	ENSFDAG00000015753	ZFHX3	100	92.636	Fukomys_damarensis
ENSMOCG00000017998	Zfhx3	97	63.474	ENSFHEG00000013474	zfhx3	97	75.513	Fundulus_heteroclitus
ENSMOCG00000017998	Zfhx3	86	64.665	ENSGMOG00000002909	zfhx3	100	62.752	Gadus_morhua
ENSMOCG00000017998	Zfhx3	100	86.061	ENSGALG00000000713	ZFHX3	100	86.130	Gallus_gallus
ENSMOCG00000017998	Zfhx3	97	63.179	ENSGAFG00000017278	zfhx3	95	63.785	Gambusia_affinis
ENSMOCG00000017998	Zfhx3	86	64.514	ENSGACG00000015779	zfhx3	86	64.848	Gasterosteus_aculeatus
ENSMOCG00000017998	Zfhx3	66	85.976	ENSGAGG00000002102	ZFHX3	100	86.335	Gopherus_agassizii
ENSMOCG00000017998	Zfhx3	99	93.865	ENSGGOG00000012083	ZFHX3	100	91.930	Gorilla_gorilla
ENSMOCG00000017998	Zfhx3	100	62.566	ENSHBUG00000013200	zfhx3	100	62.880	Haplochromis_burtoni
ENSMOCG00000017998	Zfhx3	100	93.265	ENSHGLG00000012541	ZFHX3	100	92.569	Heterocephalus_glaber_female
ENSMOCG00000017998	Zfhx3	100	92.751	ENSHGLG00100000797	ZFHX3	100	92.190	Heterocephalus_glaber_male
ENSMOCG00000017998	Zfhx3	72	67.037	ENSHCOG00000003135	zfhx3	86	64.324	Hippocampus_comes
ENSMOCG00000017998	Zfhx3	97	64.976	ENSIPUG00000006119	zfhx3	95	65.186	Ictalurus_punctatus
ENSMOCG00000017998	Zfhx3	100	94.518	ENSSTOG00000027206	ZFHX3	100	93.065	Ictidomys_tridecemlineatus
ENSMOCG00000017998	Zfhx3	86	64.661	ENSKMAG00000006781	zfhx3	95	63.809	Kryptolebias_marmoratus
ENSMOCG00000017998	Zfhx3	97	66.842	ENSLOCG00000004206	zfhx3	100	64.944	Lepisosteus_oculatus
ENSMOCG00000017998	Zfhx3	100	92.880	ENSLAFG00000017476	ZFHX3	100	93.432	Loxodonta_africana
ENSMOCG00000017998	Zfhx3	100	94.362	ENSMFAG00000034225	ZFHX3	100	94.551	Macaca_fascicularis
ENSMOCG00000017998	Zfhx3	100	94.281	ENSMMUG00000021041	ZFHX3	100	94.065	Macaca_mulatta
ENSMOCG00000017998	Zfhx3	100	94.310	ENSMNEG00000030137	ZFHX3	100	94.471	Macaca_nemestrina
ENSMOCG00000017998	Zfhx3	100	94.334	ENSMLEG00000042563	ZFHX3	100	94.175	Mandrillus_leucophaeus
ENSMOCG00000017998	Zfhx3	97	63.541	ENSMAMG00000021509	zfhx3	87	65.156	Mastacembelus_armatus
ENSMOCG00000017998	Zfhx3	100	62.516	ENSMZEG00005014216	zfhx3	100	62.830	Maylandia_zebra
ENSMOCG00000017998	Zfhx3	78	87.936	ENSMGAG00000008764	ZFHX3	97	86.884	Meleagris_gallopavo
ENSMOCG00000017998	Zfhx3	100	96.246	ENSMAUG00000000602	Zfhx3	100	96.246	Mesocricetus_auratus
ENSMOCG00000017998	Zfhx3	100	93.484	ENSMICG00000003537	ZFHX3	100	93.538	Microcebus_murinus
ENSMOCG00000017998	Zfhx3	97	64.079	ENSMMOG00000016551	zfhx3	95	64.291	Mola_mola
ENSMOCG00000017998	Zfhx3	100	94.881	ENSMUSG00000038872	Zfhx3	100	94.792	Mus_musculus
ENSMOCG00000017998	Zfhx3	100	95.836	MGP_PahariEiJ_G0023139	Zfhx3	100	95.836	Mus_pahari
ENSMOCG00000017998	Zfhx3	100	94.505	MGP_SPRETEiJ_G0032657	Zfhx3	100	94.685	Mus_spretus
ENSMOCG00000017998	Zfhx3	57	94.345	ENSMPUG00000007747	ZFHX3	100	92.837	Mustela_putorius_furo
ENSMOCG00000017998	Zfhx3	100	92.065	ENSMLUG00000016100	ZFHX3	100	91.581	Myotis_lucifugus
ENSMOCG00000017998	Zfhx3	100	92.189	ENSNGAG00000001724	Zfhx3	100	92.216	Nannospalax_galili
ENSMOCG00000017998	Zfhx3	97	64.331	ENSNBRG00000010822	zfhx3	100	62.785	Neolamprologus_brichardi
ENSMOCG00000017998	Zfhx3	88	97.436	ENSNLEG00000032567	ZFHX3	99	97.436	Nomascus_leucogenys
ENSMOCG00000017998	Zfhx3	100	91.546	ENSODEG00000014257	ZFHX3	100	91.028	Octodon_degus
ENSMOCG00000017998	Zfhx3	60	77.199	ENSONIG00000005914	zfhx3	98	71.380	Oreochromis_niloticus
ENSMOCG00000017998	Zfhx3	86	90.612	ENSOANG00000005084	ZFHX3	100	89.686	Ornithorhynchus_anatinus
ENSMOCG00000017998	Zfhx3	87	92.453	ENSOCUG00000017910	-	99	92.671	Oryctolagus_cuniculus
ENSMOCG00000017998	Zfhx3	83	65.983	ENSORLG00000007874	zfhx3	95	63.346	Oryzias_latipes
ENSMOCG00000017998	Zfhx3	97	63.757	ENSORLG00020009729	zfhx3	95	63.410	Oryzias_latipes_hni
ENSMOCG00000017998	Zfhx3	97	63.540	ENSORLG00015007912	zfhx3	95	63.173	Oryzias_latipes_hsok
ENSMOCG00000017998	Zfhx3	97	63.889	ENSOMEG00000001800	zfhx3	87	64.334	Oryzias_melastigma
ENSMOCG00000017998	Zfhx3	100	92.057	ENSPPRG00000005184	ZFHX3	100	92.855	Panthera_pardus
ENSMOCG00000017998	Zfhx3	100	93.832	ENSPTRG00000008340	ZFHX3	100	93.725	Pan_troglodytes
ENSMOCG00000017998	Zfhx3	100	94.011	ENSPANG00000010456	ZFHX3	100	94.470	Papio_anubis
ENSMOCG00000017998	Zfhx3	90	74.104	ENSPKIG00000009598	zfhx3	93	66.468	Paramormyrops_kingsleyae
ENSMOCG00000017998	Zfhx3	84	65.132	ENSPKIG00000001525	-	83	65.414	Paramormyrops_kingsleyae
ENSMOCG00000017998	Zfhx3	97	63.339	ENSPMGG00000006062	zfhx3	99	70.483	Periophthalmus_magnuspinnatus
ENSMOCG00000017998	Zfhx3	100	97.256	ENSPEMG00000010630	Zfhx3	100	97.256	Peromyscus_maniculatus_bairdii
ENSMOCG00000017998	Zfhx3	97	63.202	ENSPFOG00000001702	zfhx3	95	63.524	Poecilia_formosa
ENSMOCG00000017998	Zfhx3	97	63.458	ENSPLAG00000018955	zfhx3	95	63.817	Poecilia_latipinna
ENSMOCG00000017998	Zfhx3	97	63.361	ENSPMEG00000022333	zfhx3	100	61.893	Poecilia_mexicana
ENSMOCG00000017998	Zfhx3	97	63.620	ENSPREG00000023212	zfhx3	86	65.210	Poecilia_reticulata
ENSMOCG00000017998	Zfhx3	86	94.047	ENSPPYG00000007513	ZFHX3	100	94.520	Pongo_abelii
ENSMOCG00000017998	Zfhx3	87	90.785	ENSPCAG00000010600	ZFHX3	99	91.633	Procavia_capensis
ENSMOCG00000017998	Zfhx3	100	93.780	ENSPCOG00000025382	ZFHX3	100	93.700	Propithecus_coquereli
ENSMOCG00000017998	Zfhx3	96	92.621	ENSPVAG00000006664	ZFHX3	96	92.291	Pteropus_vampyrus
ENSMOCG00000017998	Zfhx3	100	62.276	ENSPNYG00000013409	zfhx3	100	62.664	Pundamilia_nyererei
ENSMOCG00000017998	Zfhx3	100	95.692	ENSRNOG00000014452	Zfhx3	100	95.692	Rattus_norvegicus
ENSMOCG00000017998	Zfhx3	100	93.073	ENSRBIG00000031579	ZFHX3	100	92.857	Rhinopithecus_bieti
ENSMOCG00000017998	Zfhx3	100	94.287	ENSRROG00000039904	ZFHX3	100	94.126	Rhinopithecus_roxellana
ENSMOCG00000017998	Zfhx3	91	93.471	ENSSBOG00000034332	ZFHX3	96	93.589	Saimiri_boliviensis_boliviensis
ENSMOCG00000017998	Zfhx3	84	66.084	ENSSFOG00015019511	zfhx3	86	66.197	Scleropages_formosus
ENSMOCG00000017998	Zfhx3	93	73.333	ENSSFOG00015014986	zfhx3	99	70.276	Scleropages_formosus
ENSMOCG00000017998	Zfhx3	94	65.015	ENSSDUG00000017102	zfhx3	97	75.205	Seriola_dumerili
ENSMOCG00000017998	Zfhx3	97	64.105	ENSSPAG00000002113	zfhx3	87	65.865	Stegastes_partitus
ENSMOCG00000017998	Zfhx3	100	92.924	ENSSSCG00000002752	ZFHX3	100	92.310	Sus_scrofa
ENSMOCG00000017998	Zfhx3	95	85.103	ENSTGUG00000008190	ZFHX3	94	84.976	Taeniopygia_guttata
ENSMOCG00000017998	Zfhx3	86	64.887	ENSTRUG00000017601	zfhx3	95	63.590	Takifugu_rubripes
ENSMOCG00000017998	Zfhx3	100	93.069	ENSVVUG00000017344	ZFHX3	100	92.924	Vulpes_vulpes
ENSMOCG00000017998	Zfhx3	97	63.512	ENSXMAG00000027288	zfhx3	95	64.021	Xiphophorus_maculatus