EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000018273 (Gene tree)
Gene ID: 101992016
Gene Symbol: Prpf4
Alias: 1600015H11Rik
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 17577 bases
Position: chr10:8359682-8377258
Accession: 101992016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000020668	PRP4	PF08799.11	4.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000024492	-	2581	XM_013348235	ENSMOCP00000020668	521 (aa)	XP_013203689	UPI00038C4675

Gene Model

Click here to download ENSMOCG00000018273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000018273's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000018273	Prpf4	56	33.673	ENSMOCG00000019634	Tbl3	66	33.673
ENSMOCG00000018273	Prpf4	56	33.051	ENSMOCG00000015822	Poc1b	65	33.051
ENSMOCG00000018273	Prpf4	56	30.000	ENSMOCG00000003396	Poc1a	78	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000018273	Prpf4	100	98.656	ENSG00000136875	PRPF4	100	98.656	Homo_sapiens
ENSMOCG00000018273	Prpf4	96	77.197	ENSAPOG00000014132	prpf4	98	77.197	Acanthochromis_polyacanthus
ENSMOCG00000018273	Prpf4	100	98.848	ENSAMEG00000013048	PRPF4	98	98.848	Ailuropoda_melanoleuca
ENSMOCG00000018273	Prpf4	96	76.984	ENSACIG00000005579	prpf4	99	76.984	Amphilophus_citrinellus
ENSMOCG00000018273	Prpf4	96	76.634	ENSAOCG00000005457	prpf4	99	76.634	Amphiprion_ocellaris
ENSMOCG00000018273	Prpf4	96	76.436	ENSAPEG00000000776	prpf4	99	76.436	Amphiprion_percula
ENSMOCG00000018273	Prpf4	96	76.786	ENSATEG00000023013	prpf4	99	76.786	Anabas_testudineus
ENSMOCG00000018273	Prpf4	100	88.484	ENSAPLG00000006534	PRPF4	97	88.484	Anas_platyrhynchos
ENSMOCG00000018273	Prpf4	100	89.101	ENSACAG00000015110	PRPF4	100	89.101	Anolis_carolinensis
ENSMOCG00000018273	Prpf4	100	99.040	ENSANAG00000022464	PRPF4	96	99.040	Aotus_nancymaae
ENSMOCG00000018273	Prpf4	96	76.786	ENSACLG00000019031	prpf4	99	76.786	Astatotilapia_calliptera
ENSMOCG00000018273	Prpf4	97	61.996	ENSAMXG00000006756	prpf4	99	73.267	Astyanax_mexicanus
ENSMOCG00000018273	Prpf4	100	98.081	ENSBTAG00000004571	PRPF4	100	98.081	Bos_taurus
ENSMOCG00000018273	Prpf4	90	44.304	WBGene00007972	prp-4	96	44.211	Caenorhabditis_elegans
ENSMOCG00000018273	Prpf4	100	98.851	ENSCJAG00000017856	PRPF4	100	98.851	Callithrix_jacchus
ENSMOCG00000018273	Prpf4	100	98.848	ENSCAFG00000003224	PRPF4	97	98.848	Canis_familiaris
ENSMOCG00000018273	Prpf4	100	98.848	ENSCAFG00020022637	PRPF4	100	98.848	Canis_lupus_dingo
ENSMOCG00000018273	Prpf4	100	98.276	ENSCHIG00000024648	-	100	98.276	Capra_hircus
ENSMOCG00000018273	Prpf4	100	98.656	ENSTSYG00000010366	PRPF4	100	98.656	Carlito_syrichta
ENSMOCG00000018273	Prpf4	88	88.305	ENSCAPG00000008935	PRPF4	97	88.305	Cavia_aperea
ENSMOCG00000018273	Prpf4	100	98.273	ENSCPOG00000010747	-	100	98.273	Cavia_porcellus
ENSMOCG00000018273	Prpf4	100	91.747	ENSCPOG00000014729	-	100	91.747	Cavia_porcellus
ENSMOCG00000018273	Prpf4	100	98.848	ENSCCAG00000028990	PRPF4	100	98.848	Cebus_capucinus
ENSMOCG00000018273	Prpf4	100	98.656	ENSCATG00000021552	PRPF4	100	98.656	Cercocebus_atys
ENSMOCG00000018273	Prpf4	100	98.464	ENSCLAG00000013448	PRPF4	100	98.464	Chinchilla_lanigera
ENSMOCG00000018273	Prpf4	87	95.354	ENSCHOG00000007233	PRPF4	100	95.354	Choloepus_hoffmanni
ENSMOCG00000018273	Prpf4	99	90.680	ENSCPBG00000019136	PRPF4	74	90.680	Chrysemys_picta_bellii
ENSMOCG00000018273	Prpf4	96	59.055	ENSCING00000001299	-	97	58.416	Ciona_intestinalis
ENSMOCG00000018273	Prpf4	96	56.944	ENSCSAVG00000009178	-	100	58.225	Ciona_savignyi
ENSMOCG00000018273	Prpf4	100	98.848	ENSCANG00000003246	PRPF4	100	98.848	Colobus_angolensis_palliatus
ENSMOCG00000018273	Prpf4	100	99.424	ENSCGRG00001016992	Prpf4	100	99.424	Cricetulus_griseus_chok1gshd
ENSMOCG00000018273	Prpf4	100	99.424	ENSCGRG00000017560	Prpf4	100	99.424	Cricetulus_griseus_crigri
ENSMOCG00000018273	Prpf4	97	75.248	ENSCSEG00000020451	prpf4	99	75.248	Cynoglossus_semilaevis
ENSMOCG00000018273	Prpf4	97	79.406	ENSDARG00000067639	prpf4	99	79.406	Danio_rerio
ENSMOCG00000018273	Prpf4	100	98.276	ENSDNOG00000013203	PRPF4	100	98.276	Dasypus_novemcinctus
ENSMOCG00000018273	Prpf4	100	98.656	ENSDORG00000026275	Prpf4	100	98.656	Dipodomys_ordii
ENSMOCG00000018273	Prpf4	87	56.893	FBgn0036733	U4-U6-60K	99	50.730	Drosophila_melanogaster
ENSMOCG00000018273	Prpf4	100	96.941	ENSETEG00000020389	PRPF4	100	96.941	Echinops_telfairi
ENSMOCG00000018273	Prpf4	95	73.272	ENSEBUG00000015229	prpf4	86	73.733	Eptatretus_burgeri
ENSMOCG00000018273	Prpf4	100	99.040	ENSEASG00005022678	PRPF4	100	99.040	Equus_asinus_asinus
ENSMOCG00000018273	Prpf4	100	99.125	ENSECAG00000007072	PRPF4	100	99.040	Equus_caballus
ENSMOCG00000018273	Prpf4	100	77.729	ENSEEUG00000007480	PRPF4	100	77.729	Erinaceus_europaeus
ENSMOCG00000018273	Prpf4	97	80.396	ENSELUG00000007510	prpf4	99	80.396	Esox_lucius
ENSMOCG00000018273	Prpf4	100	98.851	ENSFCAG00000005514	PRPF4	100	98.851	Felis_catus
ENSMOCG00000018273	Prpf4	98	87.892	ENSFALG00000005423	PRPF4	90	85.161	Ficedula_albicollis
ENSMOCG00000018273	Prpf4	100	98.273	ENSFDAG00000005839	PRPF4	100	98.273	Fukomys_damarensis
ENSMOCG00000018273	Prpf4	96	76.190	ENSFHEG00000001300	prpf4	99	76.190	Fundulus_heteroclitus
ENSMOCG00000018273	Prpf4	98	89.432	ENSGALG00000008857	PRPF4	96	88.760	Gallus_gallus
ENSMOCG00000018273	Prpf4	65	71.176	ENSGAFG00000012164	prpf4	70	71.176	Gambusia_affinis
ENSMOCG00000018273	Prpf4	96	69.841	ENSGACG00000015476	prpf4	99	69.048	Gasterosteus_aculeatus
ENSMOCG00000018273	Prpf4	99	90.874	ENSGAGG00000025029	PRPF4	95	90.874	Gopherus_agassizii
ENSMOCG00000018273	Prpf4	100	98.656	ENSGGOG00000006943	PRPF4	100	98.656	Gorilla_gorilla
ENSMOCG00000018273	Prpf4	96	76.587	ENSHBUG00000000562	prpf4	99	76.587	Haplochromis_burtoni
ENSMOCG00000018273	Prpf4	100	79.655	ENSHGLG00000003838	-	100	79.655	Heterocephalus_glaber_female
ENSMOCG00000018273	Prpf4	100	98.273	ENSHGLG00000015191	PRPF4	100	98.273	Heterocephalus_glaber_female
ENSMOCG00000018273	Prpf4	100	81.071	ENSHGLG00000016628	-	100	81.836	Heterocephalus_glaber_female
ENSMOCG00000018273	Prpf4	100	79.655	ENSHGLG00100005571	-	100	79.655	Heterocephalus_glaber_male
ENSMOCG00000018273	Prpf4	97	78.614	ENSIPUG00000017956	PRPF4	99	78.614	Ictalurus_punctatus
ENSMOCG00000018273	Prpf4	100	98.848	ENSSTOG00000027833	PRPF4	100	98.848	Ictidomys_tridecemlineatus
ENSMOCG00000018273	Prpf4	100	98.656	ENSJJAG00000008838	Prpf4	100	98.656	Jaculus_jaculus
ENSMOCG00000018273	Prpf4	96	76.587	ENSKMAG00000013236	prpf4	99	76.587	Kryptolebias_marmoratus
ENSMOCG00000018273	Prpf4	96	75.697	ENSLBEG00000020611	prpf4	99	75.697	Labrus_bergylta
ENSMOCG00000018273	Prpf4	99	80.154	ENSLACG00000016317	PRPF4	99	80.154	Latimeria_chalumnae
ENSMOCG00000018273	Prpf4	97	81.584	ENSLOCG00000000581	prpf4	99	81.584	Lepisosteus_oculatus
ENSMOCG00000018273	Prpf4	100	98.084	ENSLAFG00000018225	PRPF4	100	98.084	Loxodonta_africana
ENSMOCG00000018273	Prpf4	100	98.464	ENSMFAG00000039397	PRPF4	100	98.464	Macaca_fascicularis
ENSMOCG00000018273	Prpf4	100	98.656	ENSMMUG00000005844	PRPF4	100	98.656	Macaca_mulatta
ENSMOCG00000018273	Prpf4	100	88.292	ENSMNEG00000033737	PRPF4	100	88.292	Macaca_nemestrina
ENSMOCG00000018273	Prpf4	100	98.656	ENSMLEG00000040284	PRPF4	100	98.656	Mandrillus_leucophaeus
ENSMOCG00000018273	Prpf4	97	75.937	ENSMAMG00000020141	prpf4	99	75.937	Mastacembelus_armatus
ENSMOCG00000018273	Prpf4	96	76.786	ENSMZEG00005023205	prpf4	99	76.786	Maylandia_zebra
ENSMOCG00000018273	Prpf4	99	87.692	ENSMGAG00000001796	PRPF4	97	87.692	Meleagris_gallopavo
ENSMOCG00000018273	Prpf4	100	98.848	ENSMAUG00000018022	Prpf4	100	98.848	Mesocricetus_auratus
ENSMOCG00000018273	Prpf4	100	97.889	ENSMICG00000015022	PRPF4	100	97.701	Microcebus_murinus
ENSMOCG00000018273	Prpf4	97	75.050	ENSMMOG00000021177	prpf4	99	75.050	Mola_mola
ENSMOCG00000018273	Prpf4	100	94.646	ENSMODG00000025096	-	97	94.646	Monodelphis_domestica
ENSMOCG00000018273	Prpf4	100	94.073	ENSMODG00000004444	-	100	94.073	Monodelphis_domestica
ENSMOCG00000018273	Prpf4	96	76.389	ENSMALG00000013624	prpf4	99	76.389	Monopterus_albus
ENSMOCG00000018273	Prpf4	100	99.232	MGP_CAROLIEiJ_G0026078	Prpf4	100	99.232	Mus_caroli
ENSMOCG00000018273	Prpf4	100	99.232	ENSMUSG00000066148	Prpf4	100	99.232	Mus_musculus
ENSMOCG00000018273	Prpf4	100	99.040	MGP_PahariEiJ_G0028413	Prpf4	100	99.040	Mus_pahari
ENSMOCG00000018273	Prpf4	100	99.232	MGP_SPRETEiJ_G0027042	Prpf4	100	99.232	Mus_spretus
ENSMOCG00000018273	Prpf4	100	98.848	ENSMPUG00000007883	PRPF4	100	98.848	Mustela_putorius_furo
ENSMOCG00000018273	Prpf4	100	98.464	ENSMLUG00000015309	-	97	98.464	Myotis_lucifugus
ENSMOCG00000018273	Prpf4	100	96.545	ENSMLUG00000008626	-	97	96.545	Myotis_lucifugus
ENSMOCG00000018273	Prpf4	100	93.282	ENSNGAG00000000468	Prpf4	100	93.282	Nannospalax_galili
ENSMOCG00000018273	Prpf4	96	76.984	ENSNBRG00000007972	prpf4	99	76.984	Neolamprologus_brichardi
ENSMOCG00000018273	Prpf4	100	99.040	ENSNLEG00000016647	PRPF4	100	99.040	Nomascus_leucogenys
ENSMOCG00000018273	Prpf4	99	94.747	ENSMEUG00000013256	PRPF4	100	94.747	Notamacropus_eugenii
ENSMOCG00000018273	Prpf4	100	98.084	ENSOPRG00000005302	PRPF4	100	98.084	Ochotona_princeps
ENSMOCG00000018273	Prpf4	100	98.656	ENSODEG00000018147	PRPF4	100	98.656	Octodon_degus
ENSMOCG00000018273	Prpf4	99	75.096	ENSONIG00000012671	prpf4	99	76.786	Oreochromis_niloticus
ENSMOCG00000018273	Prpf4	100	98.848	ENSOCUG00000005046	PRPF4	100	98.848	Oryctolagus_cuniculus
ENSMOCG00000018273	Prpf4	96	74.701	ENSORLG00000019641	prpf4	98	75.000	Oryzias_latipes
ENSMOCG00000018273	Prpf4	96	74.701	ENSORLG00020019438	prpf4	98	75.000	Oryzias_latipes_hni
ENSMOCG00000018273	Prpf4	96	74.947	ENSOMEG00000020941	prpf4	99	74.947	Oryzias_melastigma
ENSMOCG00000018273	Prpf4	100	93.666	ENSOGAG00000007802	PRPF4	98	93.666	Otolemur_garnettii
ENSMOCG00000018273	Prpf4	100	98.464	ENSOARG00000006319	PRPF4	97	98.464	Ovis_aries
ENSMOCG00000018273	Prpf4	100	98.656	ENSPPAG00000041797	PRPF4	100	98.656	Pan_paniscus
ENSMOCG00000018273	Prpf4	100	99.040	ENSPPRG00000014360	PRPF4	100	99.040	Panthera_pardus
ENSMOCG00000018273	Prpf4	100	99.040	ENSPTIG00000009574	PRPF4	100	99.040	Panthera_tigris_altaica
ENSMOCG00000018273	Prpf4	100	98.656	ENSPTRG00000021274	PRPF4	100	98.467	Pan_troglodytes
ENSMOCG00000018273	Prpf4	100	98.464	ENSPANG00000025776	PRPF4	96	98.464	Papio_anubis
ENSMOCG00000018273	Prpf4	97	80.990	ENSPKIG00000017259	prpf4	99	80.990	Paramormyrops_kingsleyae
ENSMOCG00000018273	Prpf4	100	89.060	ENSPSIG00000010713	PRPF4	91	89.575	Pelodiscus_sinensis
ENSMOCG00000018273	Prpf4	99	58.545	ENSPMGG00000000997	prpf4	99	58.652	Periophthalmus_magnuspinnatus
ENSMOCG00000018273	Prpf4	100	99.424	ENSPEMG00000024115	Prpf4	100	99.424	Peromyscus_maniculatus_bairdii
ENSMOCG00000018273	Prpf4	99	94.747	ENSPCIG00000003821	PRPF4	99	94.747	Phascolarctos_cinereus
ENSMOCG00000018273	Prpf4	96	70.020	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSMOCG00000018273	Prpf4	82	69.659	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSMOCG00000018273	Prpf4	92	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSMOCG00000018273	Prpf4	98	98.441	ENSPCAG00000002561	PRPF4	99	98.441	Procavia_capensis
ENSMOCG00000018273	Prpf4	100	98.464	ENSPCOG00000011975	PRPF4	100	98.464	Propithecus_coquereli
ENSMOCG00000018273	Prpf4	100	95.211	ENSPVAG00000004708	PRPF4	100	95.211	Pteropus_vampyrus
ENSMOCG00000018273	Prpf4	96	76.786	ENSPNYG00000008013	prpf4	99	76.786	Pundamilia_nyererei
ENSMOCG00000018273	Prpf4	97	80.198	ENSPNAG00000000697	prpf4	99	80.198	Pygocentrus_nattereri
ENSMOCG00000018273	Prpf4	100	99.040	ENSRNOG00000014777	Prpf4	100	99.040	Rattus_norvegicus
ENSMOCG00000018273	Prpf4	100	98.848	ENSRBIG00000040221	PRPF4	100	98.848	Rhinopithecus_bieti
ENSMOCG00000018273	Prpf4	100	98.848	ENSRROG00000040240	PRPF4	100	98.848	Rhinopithecus_roxellana
ENSMOCG00000018273	Prpf4	100	95.029	ENSSHAG00000017658	PRPF4	100	95.029	Sarcophilus_harrisii
ENSMOCG00000018273	Prpf4	97	81.782	ENSSFOG00015008963	prpf4	99	81.782	Scleropages_formosus
ENSMOCG00000018273	Prpf4	96	75.397	ENSSMAG00000008889	prpf4	99	75.397	Scophthalmus_maximus
ENSMOCG00000018273	Prpf4	96	73.307	ENSSDUG00000022083	prpf4	98	73.506	Seriola_dumerili
ENSMOCG00000018273	Prpf4	96	73.506	ENSSLDG00000008115	prpf4	98	73.705	Seriola_lalandi_dorsalis
ENSMOCG00000018273	Prpf4	100	90.211	ENSSPUG00000015582	PRPF4	100	90.211	Sphenodon_punctatus
ENSMOCG00000018273	Prpf4	96	70.809	ENSSPAG00000011286	prpf4	99	70.809	Stegastes_partitus
ENSMOCG00000018273	Prpf4	100	99.040	ENSSSCG00000024648	PRPF4	100	99.040	Sus_scrofa
ENSMOCG00000018273	Prpf4	95	89.655	ENSTGUG00000002623	PRPF4	100	89.980	Taeniopygia_guttata
ENSMOCG00000018273	Prpf4	97	75.692	ENSTRUG00000008853	prpf4	99	75.692	Takifugu_rubripes
ENSMOCG00000018273	Prpf4	97	75.050	ENSTNIG00000013250	prpf4	99	75.050	Tetraodon_nigroviridis
ENSMOCG00000018273	Prpf4	100	90.230	ENSTBEG00000000821	PRPF4	100	90.230	Tupaia_belangeri
ENSMOCG00000018273	Prpf4	82	98.322	ENSTTRG00000003246	PRPF4	85	98.322	Tursiops_truncatus
ENSMOCG00000018273	Prpf4	64	95.509	ENSUAMG00000018288	PRPF4	90	95.509	Ursus_americanus
ENSMOCG00000018273	Prpf4	100	98.081	ENSUMAG00000019375	PRPF4	100	98.081	Ursus_maritimus
ENSMOCG00000018273	Prpf4	100	98.276	ENSVPAG00000005281	PRPF4	100	98.276	Vicugna_pacos
ENSMOCG00000018273	Prpf4	100	97.714	ENSVVUG00000002476	PRPF4	100	97.714	Vulpes_vulpes
ENSMOCG00000018273	Prpf4	69	58.056	ENSXCOG00000006101	prpf4	93	59.653	Xiphophorus_couchianus
ENSMOCG00000018273	Prpf4	88	64.410	ENSXMAG00000002750	prpf4	98	65.408	Xiphophorus_maculatus