EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000018508 (Gene tree)
Gene ID: 101989764
Gene Symbol: R3hcc1
Alias: 1700020M16Rik
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 7609 bases
Position: chr17:9061980-9069588
Accession: 101989764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000021003	R3H	PF01424.22	2.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000024831	-	1669	XM_005355452	ENSMOCP00000021003	484 (aa)	XP_005355509	-

Gene Model

Click here to download ENSMOCG00000018508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000018508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000018508	R3hcc1	86	81.212	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSMOCG00000018508	R3hcc1	65	42.045	ENSAPOG00000003616	r3hcc1	64	44.898	Acanthochromis_polyacanthus
ENSMOCG00000018508	R3hcc1	99	61.350	ENSAMEG00000002963	R3HCC1	91	61.554	Ailuropoda_melanoleuca
ENSMOCG00000018508	R3hcc1	65	41.259	ENSACIG00000017144	r3hcc1	81	41.259	Amphilophus_citrinellus
ENSMOCG00000018508	R3hcc1	55	42.361	ENSATEG00000023860	r3hcc1	66	43.243	Anabas_testudineus
ENSMOCG00000018508	R3hcc1	99	43.260	ENSACAG00000016627	R3HCC1	73	63.291	Anolis_carolinensis
ENSMOCG00000018508	R3hcc1	99	64.622	ENSANAG00000036169	R3HCC1	93	81.595	Aotus_nancymaae
ENSMOCG00000018508	R3hcc1	99	63.542	ENSBTAG00000025830	R3HCC1	95	63.299	Bos_taurus
ENSMOCG00000018508	R3hcc1	99	62.986	ENSCJAG00000020118	R3HCC1	94	78.528	Callithrix_jacchus
ENSMOCG00000018508	R3hcc1	99	60.246	ENSCAFG00000009210	R3HCC1	95	61.066	Canis_familiaris
ENSMOCG00000018508	R3hcc1	85	56.086	ENSCAFG00020012870	R3HCC1	86	57.279	Canis_lupus_dingo
ENSMOCG00000018508	R3hcc1	99	60.327	ENSTSYG00000000511	R3HCC1	77	64.008	Carlito_syrichta
ENSMOCG00000018508	R3hcc1	99	62.474	ENSCCAG00000037811	R3HCC1	94	80.368	Cebus_capucinus
ENSMOCG00000018508	R3hcc1	99	63.395	ENSCATG00000032971	R3HCC1	94	80.368	Cercocebus_atys
ENSMOCG00000018508	R3hcc1	98	61.506	ENSCLAG00000015556	R3HCC1	79	82.353	Chinchilla_lanigera
ENSMOCG00000018508	R3hcc1	99	62.986	ENSCSAG00000016250	R3HCC1	87	79.755	Chlorocebus_sabaeus
ENSMOCG00000018508	R3hcc1	86	80.606	ENSCANG00000029441	R3HCC1	94	80.982	Colobus_angolensis_palliatus
ENSMOCG00000018508	R3hcc1	100	84.394	ENSCGRG00001014977	R3hcc1	100	84.189	Cricetulus_griseus_chok1gshd
ENSMOCG00000018508	R3hcc1	100	84.394	ENSCGRG00000004454	R3hcc1	100	84.189	Cricetulus_griseus_crigri
ENSMOCG00000018508	R3hcc1	62	46.250	ENSCSEG00000005748	r3hcc1	68	47.619	Cynoglossus_semilaevis
ENSMOCG00000018508	R3hcc1	84	30.144	ENSCVAG00000002640	r3hcc1	90	36.905	Cyprinodon_variegatus
ENSMOCG00000018508	R3hcc1	97	31.423	ENSDARG00000099593	r3hcc1	94	44.828	Danio_rerio
ENSMOCG00000018508	R3hcc1	99	64.969	ENSDORG00000026365	R3hcc1	99	65.173	Dipodomys_ordii
ENSMOCG00000018508	R3hcc1	99	55.876	ENSETEG00000001147	R3HCC1	55	60.317	Echinops_telfairi
ENSMOCG00000018508	R3hcc1	99	61.554	ENSEASG00005018782	R3HCC1	80	62.372	Equus_asinus_asinus
ENSMOCG00000018508	R3hcc1	93	35.982	ENSELUG00000023650	r3hcc1	86	41.060	Esox_lucius
ENSMOCG00000018508	R3hcc1	99	61.602	ENSFCAG00000012395	R3HCC1	96	62.834	Felis_catus
ENSMOCG00000018508	R3hcc1	60	35.119	ENSGMOG00000017590	-	88	35.119	Gadus_morhua
ENSMOCG00000018508	R3hcc1	97	34.864	ENSGAFG00000008747	-	68	46.575	Gambusia_affinis
ENSMOCG00000018508	R3hcc1	97	32.636	ENSGACG00000008447	r3hcc1	69	44.898	Gasterosteus_aculeatus
ENSMOCG00000018508	R3hcc1	86	81.212	ENSGGOG00000013817	R3HCC1	96	81.595	Gorilla_gorilla
ENSMOCG00000018508	R3hcc1	100	60.204	ENSHGLG00000010517	R3HCC1	52	67.181	Heterocephalus_glaber_female
ENSMOCG00000018508	R3hcc1	100	60.204	ENSHGLG00100006388	R3HCC1	52	67.181	Heterocephalus_glaber_male
ENSMOCG00000018508	R3hcc1	64	43.293	ENSHCOG00000011745	r3hcc1	71	45.395	Hippocampus_comes
ENSMOCG00000018508	R3hcc1	73	42.038	ENSIPUG00000024504	r3hcc1	65	47.945	Ictalurus_punctatus
ENSMOCG00000018508	R3hcc1	75	80.606	ENSSTOG00000027130	R3HCC1	77	80.864	Ictidomys_tridecemlineatus
ENSMOCG00000018508	R3hcc1	99	69.715	ENSJJAG00000013075	R3hcc1	99	69.512	Jaculus_jaculus
ENSMOCG00000018508	R3hcc1	62	44.056	ENSKMAG00000000286	r3hcc1	78	42.857	Kryptolebias_marmoratus
ENSMOCG00000018508	R3hcc1	97	33.613	ENSLOCG00000015442	r3hcc1	57	64.286	Lepisosteus_oculatus
ENSMOCG00000018508	R3hcc1	99	60.243	ENSLAFG00000016137	R3HCC1	95	60.446	Loxodonta_africana
ENSMOCG00000018508	R3hcc1	86	79.394	ENSMFAG00000032894	R3HCC1	94	79.755	Macaca_fascicularis
ENSMOCG00000018508	R3hcc1	86	80.000	ENSMMUG00000016655	R3HCC1	94	80.368	Macaca_mulatta
ENSMOCG00000018508	R3hcc1	86	80.000	ENSMNEG00000043283	R3HCC1	94	80.368	Macaca_nemestrina
ENSMOCG00000018508	R3hcc1	99	63.599	ENSMLEG00000030147	R3HCC1	94	80.368	Mandrillus_leucophaeus
ENSMOCG00000018508	R3hcc1	56	44.898	ENSMAMG00000018146	r3hcc1	67	44.898	Mastacembelus_armatus
ENSMOCG00000018508	R3hcc1	98	39.357	ENSMGAG00000001356	R3HCC1	62	61.589	Meleagris_gallopavo
ENSMOCG00000018508	R3hcc1	100	80.573	ENSMAUG00000016096	R3hcc1	100	80.982	Mesocricetus_auratus
ENSMOCG00000018508	R3hcc1	99	64.344	ENSMICG00000011146	R3HCC1	94	63.730	Microcebus_murinus
ENSMOCG00000018508	R3hcc1	80	72.368	ENSMODG00000016809	-	99	71.895	Monodelphis_domestica
ENSMOCG00000018508	R3hcc1	65	42.767	ENSMALG00000000731	r3hcc1	82	44.218	Monopterus_albus
ENSMOCG00000018508	R3hcc1	100	78.615	MGP_CAROLIEiJ_G0019467	R3hcc1	100	78.004	Mus_caroli
ENSMOCG00000018508	R3hcc1	100	78.208	ENSMUSG00000034194	R3hcc1	100	77.189	Mus_musculus
ENSMOCG00000018508	R3hcc1	100	76.258	MGP_PahariEiJ_G0030484	R3hcc1	100	75.855	Mus_pahari
ENSMOCG00000018508	R3hcc1	100	77.733	MGP_SPRETEiJ_G0020359	R3hcc1	100	76.721	Mus_spretus
ENSMOCG00000018508	R3hcc1	99	57.992	ENSMPUG00000003457	R3HCC1	86	61.680	Mustela_putorius_furo
ENSMOCG00000018508	R3hcc1	91	63.004	ENSNLEG00000015944	R3HCC1	81	85.833	Nomascus_leucogenys
ENSMOCG00000018508	R3hcc1	99	50.207	ENSMEUG00000010587	R3HCC1	96	70.253	Notamacropus_eugenii
ENSMOCG00000018508	R3hcc1	99	58.787	ENSOCUG00000023554	R3HCC1	85	59.875	Oryctolagus_cuniculus
ENSMOCG00000018508	R3hcc1	60	45.517	ENSORLG00000016816	r3hcc1	77	45.517	Oryzias_latipes
ENSMOCG00000018508	R3hcc1	60	45.517	ENSORLG00020012005	r3hcc1	77	45.517	Oryzias_latipes_hni
ENSMOCG00000018508	R3hcc1	56	46.207	ENSORLG00015007018	r3hcc1	71	46.207	Oryzias_latipes_hsok
ENSMOCG00000018508	R3hcc1	60	40.719	ENSOMEG00000000816	r3hcc1	70	43.448	Oryzias_melastigma
ENSMOCG00000018508	R3hcc1	51	65.476	ENSOGAG00000001291	R3HCC1	52	65.873	Otolemur_garnettii
ENSMOCG00000018508	R3hcc1	99	58.848	ENSOARG00000010146	R3HCC1	96	62.346	Ovis_aries
ENSMOCG00000018508	R3hcc1	86	81.212	ENSPPAG00000033165	R3HCC1	95	81.595	Pan_paniscus
ENSMOCG00000018508	R3hcc1	99	58.571	ENSPPRG00000002522	R3HCC1	99	63.061	Panthera_pardus
ENSMOCG00000018508	R3hcc1	93	60.879	ENSPTIG00000011230	R3HCC1	95	60.000	Panthera_tigris_altaica
ENSMOCG00000018508	R3hcc1	86	81.818	ENSPTRG00000020076	R3HCC1	94	82.209	Pan_troglodytes
ENSMOCG00000018508	R3hcc1	86	80.000	ENSPANG00000000453	R3HCC1	99	57.055	Papio_anubis
ENSMOCG00000018508	R3hcc1	98	44.969	ENSPSIG00000017664	R3HCC1	77	63.158	Pelodiscus_sinensis
ENSMOCG00000018508	R3hcc1	100	84.221	ENSPEMG00000007118	R3hcc1	100	83.984	Peromyscus_maniculatus_bairdii
ENSMOCG00000018508	R3hcc1	96	33.333	ENSPFOG00000022301	r3hcc1	64	44.828	Poecilia_formosa
ENSMOCG00000018508	R3hcc1	96	32.008	ENSPLAG00000010794	r3hcc1	64	44.828	Poecilia_latipinna
ENSMOCG00000018508	R3hcc1	96	33.333	ENSPMEG00000022515	r3hcc1	64	44.828	Poecilia_mexicana
ENSMOCG00000018508	R3hcc1	96	32.632	ENSPREG00000000713	r3hcc1	64	43.448	Poecilia_reticulata
ENSMOCG00000018508	R3hcc1	93	60.659	ENSPPYG00000018436	R3HCC1	94	81.595	Pongo_abelii
ENSMOCG00000018508	R3hcc1	69	82.692	ENSPCAG00000012229	R3HCC1	72	82.692	Procavia_capensis
ENSMOCG00000018508	R3hcc1	99	63.730	ENSPCOG00000027554	R3HCC1	99	62.090	Propithecus_coquereli
ENSMOCG00000018508	R3hcc1	65	44.595	ENSPNAG00000023875	r3hcc1	76	45.324	Pygocentrus_nattereri
ENSMOCG00000018508	R3hcc1	100	76.939	ENSRNOG00000016777	AABR07018321.1	82	76.735	Rattus_norvegicus
ENSMOCG00000018508	R3hcc1	86	80.606	ENSRBIG00000028045	R3HCC1	95	80.982	Rhinopithecus_bieti
ENSMOCG00000018508	R3hcc1	86	80.606	ENSRROG00000031126	R3HCC1	94	80.982	Rhinopithecus_roxellana
ENSMOCG00000018508	R3hcc1	99	63.505	ENSSBOG00000022590	R3HCC1	94	82.209	Saimiri_boliviensis_boliviensis
ENSMOCG00000018508	R3hcc1	61	67.532	ENSSHAG00000016526	-	68	67.532	Sarcophilus_harrisii
ENSMOCG00000018508	R3hcc1	52	46.667	ENSSFOG00015013507	r3hcc1	70	50.000	Scleropages_formosus
ENSMOCG00000018508	R3hcc1	58	44.937	ENSSMAG00000008647	r3hcc1	65	45.578	Scophthalmus_maximus
ENSMOCG00000018508	R3hcc1	60	46.154	ENSSDUG00000022786	r3hcc1	67	45.205	Seriola_dumerili
ENSMOCG00000018508	R3hcc1	60	46.154	ENSSLDG00000019031	r3hcc1	67	45.205	Seriola_lalandi_dorsalis
ENSMOCG00000018508	R3hcc1	57	47.619	ENSSPAG00000013497	r3hcc1	68	47.619	Stegastes_partitus
ENSMOCG00000018508	R3hcc1	98	57.950	ENSSSCG00000037347	-	92	57.950	Sus_scrofa
ENSMOCG00000018508	R3hcc1	99	63.017	ENSSSCG00000039915	-	92	63.636	Sus_scrofa
ENSMOCG00000018508	R3hcc1	57	42.647	ENSTRUG00000015880	r3hcc1	68	42.647	Takifugu_rubripes
ENSMOCG00000018508	R3hcc1	98	57.557	ENSTTRG00000012247	R3HCC1	94	56.729	Tursiops_truncatus
ENSMOCG00000018508	R3hcc1	99	61.885	ENSUAMG00000007344	R3HCC1	99	61.475	Ursus_americanus
ENSMOCG00000018508	R3hcc1	99	60.656	ENSVVUG00000005056	R3HCC1	95	61.475	Vulpes_vulpes
ENSMOCG00000018508	R3hcc1	93	33.188	ENSXCOG00000017626	r3hcc1	61	44.898	Xiphophorus_couchianus
ENSMOCG00000018508	R3hcc1	97	33.543	ENSXMAG00000018375	r3hcc1	64	45.205	Xiphophorus_maculatus