EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000018531 (Gene tree)
Gene ID: 101985962
Gene Symbol: -
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 22069 bases
Position: chrJH996474.1:241059-263127
Accession: 101985962
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000021033	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000024861	-	1896	XM_005369024	ENSMOCP00000021033	216 (aa)	XP_005369081	UPI00038C41FA

Gene Model

Click here to download ENSMOCG00000018531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000018531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000018531	-	89	36.598	ENSMOCG00000019999	Rab35	96	36.598
ENSMOCG00000018531	-	86	39.785	ENSMOCG00000003760	Rab14	87	39.785
ENSMOCG00000018531	-	55	31.707	ENSMOCG00000011687	Arl8a	62	31.707
ENSMOCG00000018531	-	81	33.702	ENSMOCG00000000744	Hras	94	33.702
ENSMOCG00000018531	-	75	40.964	ENSMOCG00000020142	Rab33a	70	40.964
ENSMOCG00000018531	-	93	35.961	ENSMOCG00000000452	Rab12	100	35.111
ENSMOCG00000018531	-	73	31.875	ENSMOCG00000016580	Rab34	62	31.875
ENSMOCG00000018531	-	90	42.995	ENSMOCG00000012667	Rab11b	94	42.995
ENSMOCG00000018531	-	90	41.500	ENSMOCG00000010953	Rab25	94	41.500
ENSMOCG00000018531	-	88	35.204	ENSMOCG00000021639	Rab42	91	35.204
ENSMOCG00000018531	-	89	43.590	ENSMOCG00000017022	Rab1a	96	43.590
ENSMOCG00000018531	-	75	36.585	ENSMOCG00000006994	Rab39b	77	36.585
ENSMOCG00000018531	-	84	40.884	ENSMOCG00000014140	Rab2a	92	38.974
ENSMOCG00000018531	-	78	42.262	ENSMOCG00000009821	-	83	42.262
ENSMOCG00000018531	-	84	41.436	ENSMOCG00000013161	Rab2b	88	40.526
ENSMOCG00000018531	-	77	31.737	ENSMOCG00000011313	Kras	90	30.994
ENSMOCG00000018531	-	75	31.902	ENSMOCG00000022441	Nras	85	31.902
ENSMOCG00000018531	-	90	47.423	ENSMOCG00000012268	Rab22a	98	47.423
ENSMOCG00000018531	-	93	37.864	ENSMOCG00000019866	Rab33b	89	37.864
ENSMOCG00000018531	-	91	39.594	ENSMOCG00000013044	Rab18	94	39.594
ENSMOCG00000018531	-	89	34.343	ENSMOCG00000015920	Rab9	97	34.343
ENSMOCG00000018531	-	94	41.379	ENSMOCG00000001455	Rab6b	98	41.379
ENSMOCG00000018531	-	88	31.795	ENSMOCG00000002775	Rabl2	86	31.795
ENSMOCG00000018531	-	81	36.932	ENSMOCG00000018796	Rab15	95	35.149
ENSMOCG00000018531	-	100	87.500	ENSMOCG00000009706	Rab5a	100	87.500
ENSMOCG00000018531	-	78	35.465	ENSMOCG00000004529	Rab36	64	35.465
ENSMOCG00000018531	-	77	36.047	ENSMOCG00000010381	Rab9b	97	36.869
ENSMOCG00000018531	-	90	41.262	ENSMOCG00000021138	Rab11a	94	41.262
ENSMOCG00000018531	-	81	44.000	ENSMOCG00000014387	Rab6a	84	44.000
ENSMOCG00000018531	-	89	38.542	ENSMOCG00000021448	Rab13	95	38.542
ENSMOCG00000018531	-	72	33.121	ENSMOCG00000022240	Rheb	85	33.121
ENSMOCG00000018531	-	80	35.838	ENSMOCG00000000444	Rab23	73	35.838
ENSMOCG00000018531	-	77	42.442	ENSMOCG00000002760	Rab7	83	42.442
ENSMOCG00000018531	-	89	44.330	ENSMOCG00000014673	Rab1b	96	44.330
ENSMOCG00000018531	-	55	31.967	ENSMOCG00000018769	Arl8b	62	31.967
ENSMOCG00000018531	-	99	43.519	ENSMOCG00000006448	Rab17	100	43.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000018531	-	100	98.148	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSMOCG00000018531	-	99	88.837	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSMOCG00000018531	-	100	98.148	ENSAMEG00000006003	RAB5C	100	98.148	Ailuropoda_melanoleuca
ENSMOCG00000018531	-	99	88.426	ENSACIG00000010896	rab5c	98	90.741	Amphilophus_citrinellus
ENSMOCG00000018531	-	99	88.889	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSMOCG00000018531	-	97	88.626	ENSAPEG00000017868	-	97	90.995	Amphiprion_percula
ENSMOCG00000018531	-	100	89.450	ENSATEG00000001937	rab5c	100	91.284	Anabas_testudineus
ENSMOCG00000018531	-	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSMOCG00000018531	-	99	87.500	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSMOCG00000018531	-	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSMOCG00000018531	-	96	89.048	ENSAMXG00000037267	-	99	91.429	Astyanax_mexicanus
ENSMOCG00000018531	-	99	89.401	ENSAMXG00000043717	rab5c	98	91.705	Astyanax_mexicanus
ENSMOCG00000018531	-	100	98.148	ENSBTAG00000006982	RAB5C	100	98.148	Bos_taurus
ENSMOCG00000018531	-	99	75.463	WBGene00004268	rab-5	99	75.463	Caenorhabditis_elegans
ENSMOCG00000018531	-	100	98.611	ENSCAFG00000015629	RAB5C	100	98.611	Canis_familiaris
ENSMOCG00000018531	-	100	98.611	ENSCAFG00020013537	RAB5C	100	98.611	Canis_lupus_dingo
ENSMOCG00000018531	-	100	98.148	ENSCHIG00000012960	RAB5C	100	98.148	Capra_hircus
ENSMOCG00000018531	-	100	98.611	ENSTSYG00000030531	RAB5C	100	98.611	Carlito_syrichta
ENSMOCG00000018531	-	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSMOCG00000018531	-	100	98.148	ENSCATG00000040873	RAB5C	100	98.148	Cercocebus_atys
ENSMOCG00000018531	-	100	98.148	ENSCLAG00000016650	RAB5C	100	98.148	Chinchilla_lanigera
ENSMOCG00000018531	-	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSMOCG00000018531	-	99	76.168	ENSCING00000003340	-	99	76.168	Ciona_intestinalis
ENSMOCG00000018531	-	99	74.545	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSMOCG00000018531	-	100	99.074	ENSCGRG00001014226	Rab5c	100	99.074	Cricetulus_griseus_chok1gshd
ENSMOCG00000018531	-	100	99.074	ENSCGRG00000007534	Rab5c	100	99.074	Cricetulus_griseus_crigri
ENSMOCG00000018531	-	99	91.204	ENSCSEG00000017024	rab5c	98	91.204	Cynoglossus_semilaevis
ENSMOCG00000018531	-	99	88.889	ENSCVAG00000009550	rab5c	98	91.204	Cyprinodon_variegatus
ENSMOCG00000018531	-	100	98.148	ENSDNOG00000038853	RAB5C	100	98.148	Dasypus_novemcinctus
ENSMOCG00000018531	-	100	97.685	ENSDORG00000006819	Rab5c	100	97.685	Dipodomys_ordii
ENSMOCG00000018531	-	99	73.709	FBgn0014010	Rab5	95	73.709	Drosophila_melanogaster
ENSMOCG00000018531	-	99	79.070	ENSEBUG00000014794	rab5c	100	79.070	Eptatretus_burgeri
ENSMOCG00000018531	-	100	98.148	ENSEASG00005009281	RAB5C	100	98.148	Equus_asinus_asinus
ENSMOCG00000018531	-	100	98.611	ENSECAG00000025054	RAB5C	100	98.611	Equus_caballus
ENSMOCG00000018531	-	100	98.148	ENSEEUG00000002790	RAB5C	100	98.148	Erinaceus_europaeus
ENSMOCG00000018531	-	99	87.500	ENSELUG00000018516	rab5c	99	90.278	Esox_lucius
ENSMOCG00000018531	-	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSMOCG00000018531	-	100	98.148	ENSFCAG00000002148	RAB5C	100	98.148	Felis_catus
ENSMOCG00000018531	-	100	96.296	ENSFDAG00000021541	RAB5C	100	96.296	Fukomys_damarensis
ENSMOCG00000018531	-	99	88.889	ENSFHEG00000012117	rab5c	98	91.204	Fundulus_heteroclitus
ENSMOCG00000018531	-	99	91.705	ENSFHEG00000015268	-	99	91.705	Fundulus_heteroclitus
ENSMOCG00000018531	-	99	87.500	ENSGMOG00000015096	rab5c	98	90.278	Gadus_morhua
ENSMOCG00000018531	-	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSMOCG00000018531	-	99	89.352	ENSGAFG00000000884	rab5c	98	91.667	Gambusia_affinis
ENSMOCG00000018531	-	96	91.429	ENSGAFG00000003642	-	99	88.636	Gambusia_affinis
ENSMOCG00000018531	-	87	94.681	ENSGACG00000008659	rab5c	98	87.037	Gasterosteus_aculeatus
ENSMOCG00000018531	-	100	98.148	ENSGGOG00000005472	RAB5C	100	98.148	Gorilla_gorilla
ENSMOCG00000018531	-	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSMOCG00000018531	-	99	87.500	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSMOCG00000018531	-	100	95.370	ENSHGLG00000012067	RAB5C	100	95.370	Heterocephalus_glaber_female
ENSMOCG00000018531	-	99	89.401	ENSHCOG00000004662	rab5c	97	91.244	Hippocampus_comes
ENSMOCG00000018531	-	97	82.075	ENSHCOG00000020238	-	100	80.455	Hippocampus_comes
ENSMOCG00000018531	-	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSMOCG00000018531	-	100	97.685	ENSSTOG00000006620	RAB5C	100	97.685	Ictidomys_tridecemlineatus
ENSMOCG00000018531	-	100	98.611	ENSJJAG00000021181	Rab5c	100	98.611	Jaculus_jaculus
ENSMOCG00000018531	-	99	88.426	ENSKMAG00000020038	rab5c	98	91.204	Kryptolebias_marmoratus
ENSMOCG00000018531	-	99	88.940	ENSKMAG00000017417	-	99	88.940	Kryptolebias_marmoratus
ENSMOCG00000018531	-	99	89.815	ENSLBEG00000004128	rab5c	98	92.130	Labrus_bergylta
ENSMOCG00000018531	-	100	88.073	ENSLBEG00000010408	-	99	88.073	Labrus_bergylta
ENSMOCG00000018531	-	99	93.925	ENSLOCG00000012566	rab5c	100	93.925	Lepisosteus_oculatus
ENSMOCG00000018531	-	100	98.148	ENSMFAG00000039627	RAB5C	100	98.148	Macaca_fascicularis
ENSMOCG00000018531	-	100	98.148	ENSMNEG00000000355	RAB5C	100	98.148	Macaca_nemestrina
ENSMOCG00000018531	-	99	88.479	ENSMAMG00000016207	-	99	88.479	Mastacembelus_armatus
ENSMOCG00000018531	-	99	87.963	ENSMAMG00000022322	rab5c	98	90.741	Mastacembelus_armatus
ENSMOCG00000018531	-	99	87.500	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSMOCG00000018531	-	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSMOCG00000018531	-	100	99.074	ENSMAUG00000015005	Rab5c	100	99.074	Mesocricetus_auratus
ENSMOCG00000018531	-	100	98.148	ENSMICG00000041608	RAB5C	100	98.148	Microcebus_murinus
ENSMOCG00000018531	-	100	89.908	ENSMMOG00000020621	rab5c	99	89.908	Mola_mola
ENSMOCG00000018531	-	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSMOCG00000018531	-	97	84.360	ENSMALG00000006052	rab5c	96	84.186	Monopterus_albus
ENSMOCG00000018531	-	100	98.611	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.611	Mus_caroli
ENSMOCG00000018531	-	100	98.611	ENSMUSG00000019173	Rab5c	100	98.611	Mus_musculus
ENSMOCG00000018531	-	100	98.611	MGP_PahariEiJ_G0018314	Rab5c	100	98.611	Mus_pahari
ENSMOCG00000018531	-	100	98.611	MGP_SPRETEiJ_G0018027	Rab5c	100	98.611	Mus_spretus
ENSMOCG00000018531	-	100	98.148	ENSMPUG00000010554	RAB5C	100	98.148	Mustela_putorius_furo
ENSMOCG00000018531	-	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSMOCG00000018531	-	99	88.426	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSMOCG00000018531	-	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSMOCG00000018531	-	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSMOCG00000018531	-	100	97.222	ENSODEG00000017920	RAB5C	100	97.222	Octodon_degus
ENSMOCG00000018531	-	99	88.426	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSMOCG00000018531	-	100	88.073	ENSORLG00000003882	rab5c	100	89.908	Oryzias_latipes
ENSMOCG00000018531	-	100	89.450	ENSORLG00020008388	rab5c	100	89.450	Oryzias_latipes_hni
ENSMOCG00000018531	-	100	88.073	ENSORLG00015021900	rab5c	100	89.908	Oryzias_latipes_hsok
ENSMOCG00000018531	-	100	88.073	ENSOMEG00000023078	rab5c	100	89.908	Oryzias_melastigma
ENSMOCG00000018531	-	100	98.148	ENSOGAG00000009456	RAB5C	100	98.148	Otolemur_garnettii
ENSMOCG00000018531	-	100	98.148	ENSOARG00000018768	RAB5C	100	98.148	Ovis_aries
ENSMOCG00000018531	-	100	98.148	ENSPPAG00000037206	RAB5C	100	98.148	Pan_paniscus
ENSMOCG00000018531	-	100	98.148	ENSPPRG00000005745	RAB5C	100	98.148	Panthera_pardus
ENSMOCG00000018531	-	100	98.148	ENSPTIG00000008177	RAB5C	100	98.148	Panthera_tigris_altaica
ENSMOCG00000018531	-	100	98.148	ENSPTRG00000009194	RAB5C	100	98.148	Pan_troglodytes
ENSMOCG00000018531	-	99	87.963	ENSPKIG00000020112	-	99	87.963	Paramormyrops_kingsleyae
ENSMOCG00000018531	-	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSMOCG00000018531	-	99	86.111	ENSPMGG00000010792	rab5c	97	90.521	Periophthalmus_magnuspinnatus
ENSMOCG00000018531	-	100	100.000	ENSPEMG00000017971	Rab5c	100	100.000	Peromyscus_maniculatus_bairdii
ENSMOCG00000018531	-	99	78.605	ENSPMAG00000007867	rab5c	100	78.605	Petromyzon_marinus
ENSMOCG00000018531	-	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSMOCG00000018531	-	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSMOCG00000018531	-	100	97.222	ENSPCIG00000020225	-	100	97.222	Phascolarctos_cinereus
ENSMOCG00000018531	-	99	89.352	ENSPLAG00000004790	rab5c	98	91.667	Poecilia_latipinna
ENSMOCG00000018531	-	99	90.323	ENSPLAG00000016333	-	99	90.323	Poecilia_latipinna
ENSMOCG00000018531	-	99	89.352	ENSPMEG00000011336	rab5c	98	91.667	Poecilia_mexicana
ENSMOCG00000018531	-	98	88.732	ENSPMEG00000012614	-	98	89.041	Poecilia_mexicana
ENSMOCG00000018531	-	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSMOCG00000018531	-	99	89.352	ENSPREG00000010146	rab5c	98	91.667	Poecilia_reticulata
ENSMOCG00000018531	-	100	98.148	ENSPPYG00000008398	RAB5C	100	98.148	Pongo_abelii
ENSMOCG00000018531	-	100	97.222	ENSPCAG00000016412	RAB5C	100	97.222	Procavia_capensis
ENSMOCG00000018531	-	100	97.222	ENSPCOG00000026327	RAB5C	100	97.222	Propithecus_coquereli
ENSMOCG00000018531	-	100	98.611	ENSPVAG00000003867	RAB5C	100	98.611	Pteropus_vampyrus
ENSMOCG00000018531	-	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSMOCG00000018531	-	99	87.500	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSMOCG00000018531	-	99	91.244	ENSPNAG00000028138	rab5c	98	91.244	Pygocentrus_nattereri
ENSMOCG00000018531	-	97	87.264	ENSPNAG00000002218	-	99	89.623	Pygocentrus_nattereri
ENSMOCG00000018531	-	100	99.074	ENSRNOG00000018568	Rab5c	100	99.074	Rattus_norvegicus
ENSMOCG00000018531	-	100	98.148	ENSRBIG00000031376	RAB5C	100	98.148	Rhinopithecus_bieti
ENSMOCG00000018531	-	100	98.148	ENSRROG00000032895	RAB5C	100	98.148	Rhinopithecus_roxellana
ENSMOCG00000018531	-	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSMOCG00000018531	-	100	97.685	ENSSHAG00000005267	-	100	97.685	Sarcophilus_harrisii
ENSMOCG00000018531	-	99	87.558	ENSSFOG00015009988	-	99	87.558	Scleropages_formosus
ENSMOCG00000018531	-	96	92.308	ENSSMAG00000007323	rab5c	98	90.278	Scophthalmus_maximus
ENSMOCG00000018531	-	99	91.667	ENSSDUG00000023008	rab5c	98	91.667	Seriola_dumerili
ENSMOCG00000018531	-	99	91.204	ENSSLDG00000017771	rab5c	98	91.204	Seriola_lalandi_dorsalis
ENSMOCG00000018531	-	100	96.296	ENSSPUG00000012950	-	100	96.296	Sphenodon_punctatus
ENSMOCG00000018531	-	99	89.352	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSMOCG00000018531	-	100	98.148	ENSSSCG00000032467	RAB5C	100	98.148	Sus_scrofa
ENSMOCG00000018531	-	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSMOCG00000018531	-	96	90.909	ENSTNIG00000011711	rab5c	95	90.909	Tetraodon_nigroviridis
ENSMOCG00000018531	-	100	98.148	ENSTBEG00000007092	RAB5C	100	98.148	Tupaia_belangeri
ENSMOCG00000018531	-	100	97.685	ENSTTRG00000006673	RAB5C	100	97.685	Tursiops_truncatus
ENSMOCG00000018531	-	100	98.148	ENSUAMG00000024343	RAB5C	100	98.148	Ursus_americanus
ENSMOCG00000018531	-	100	98.148	ENSUMAG00000023270	RAB5C	100	98.148	Ursus_maritimus
ENSMOCG00000018531	-	96	91.905	ENSXCOG00000006300	-	99	88.688	Xiphophorus_couchianus
ENSMOCG00000018531	-	99	88.889	ENSXCOG00000016788	rab5c	98	91.667	Xiphophorus_couchianus
ENSMOCG00000018531	-	99	90.783	ENSXMAG00000022179	-	99	90.783	Xiphophorus_maculatus
ENSMOCG00000018531	-	99	89.352	ENSXMAG00000003266	rab5c	98	91.667	Xiphophorus_maculatus