EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMOCG00000018557 (Gene tree)
Gene ID
101987955
Gene Symbol
Gm20521
Alias
-
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Microtus_ochrogaster
Status
putative
Strand
Minus strand
Length
18109 bases
Position
chrJH996510.1:1066567-1084675
Accession
101987955
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMOCP00000021088RRM_1PF00076.222.1e-1511
ENSMOCP00000021081RRM_1PF00076.227.2e-1511
ENSMOCP00000021085RRM_1PF00076.228.2e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMOCT00000024919-3529XM_005370470ENSMOCP00000021090193 (aa)XP_005370527UPI00038BDADF
ENSMOCT00000024910-2269XM_005370469ENSMOCP00000021081302 (aa)XP_005370526UPI00038C5C6F
ENSMOCT00000024914-1002-ENSMOCP00000021085333 (aa)--
ENSMOCT00000024917-492-ENSMOCP00000021088164 (aa)--
ENSMOCT00000024921-540-ENSMOCP00000021092179 (aa)--
Gene Model
Click here to download ENSMOCG00000018557's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000018557's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMOCG00000018557Gm205218852.980ENSMOCG00000007955Pabpn1l5156.164
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMOCG00000018557Gm2052110097.059ENSG00000100836PABPN110098.876Homo_sapiens
ENSMOCG00000018557Gm2052110098.799ENSG00000258643BCL2L2-PABPN110098.799Homo_sapiens
ENSMOCG00000018557Gm205219091.156ENSAPOG00000016425pabpn19972.103Acanthochromis_polyacanthus
ENSMOCG00000018557Gm205219099.320ENSAMEG00000007048BCL2L2-PABPN110098.942Ailuropoda_melanoleuca
ENSMOCG00000018557Gm205219089.865ENSACIG00000021744pabpn19480.952Amphilophus_citrinellus
ENSMOCG00000018557Gm205219091.156ENSAOCG00000015805pabpn19972.103Amphiprion_ocellaris
ENSMOCG00000018557Gm205219091.156ENSAPEG00000009623pabpn19972.103Amphiprion_percula
ENSMOCG00000018557Gm205219091.156ENSATEG00000020531pabpn19972.103Anabas_testudineus
ENSMOCG00000018557Gm205219594.194ENSACAG00000006185-7487.081Anolis_carolinensis
ENSMOCG00000018557Gm2052110095.376ENSANAG00000024513-10095.376Aotus_nancymaae
ENSMOCG00000018557Gm205219089.262ENSACLG00000016374pabpn16679.899Astatotilapia_calliptera
ENSMOCG00000018557Gm205219092.517ENSAMXG00000000452pabpn19482.738Astyanax_mexicanus
ENSMOCG00000018557Gm205219097.959ENSBTAG00000053753-7197.382Bos_taurus
ENSMOCG00000018557Gm2052110096.405ENSBTAG00000006884PABPN110096.405Bos_taurus
ENSMOCG00000018557Gm205219098.639ENSBTAG00000050594-8976.895Bos_taurus
ENSMOCG00000018557Gm205218760.839WBGene00003904pabp-29153.886Caenorhabditis_elegans
ENSMOCG00000018557Gm2052110097.059ENSCJAG00000007960-10097.059Callithrix_jacchus
ENSMOCG00000018557Gm205218397.059ENSCJAG00000004407-8997.191Callithrix_jacchus
ENSMOCG00000018557Gm2052110094.118ENSCAFG00000011482PABPN110094.118Canis_familiaris
ENSMOCG00000018557Gm2052110097.059ENSCAFG00020007298-10097.059Canis_lupus_dingo
ENSMOCG00000018557Gm2052110097.059ENSCAFG00020006651-10097.059Canis_lupus_dingo
ENSMOCG00000018557Gm2052110096.732ENSCHIG00000012184PABPN110096.732Capra_hircus
ENSMOCG00000018557Gm2052110099.099ENSTSYG00000033996BCL2L2-PABPN110099.099Carlito_syrichta
ENSMOCG00000018557Gm205216698.148ENSCAPG00000009461-9997.826Cavia_aperea
ENSMOCG00000018557Gm2052110096.405ENSCPOG00000025574PABPN110096.405Cavia_porcellus
ENSMOCG00000018557Gm2052110097.059ENSCCAG00000033954BCL2L2-PABPN110097.059Cebus_capucinus
ENSMOCG00000018557Gm2052110099.099ENSCATG00000038536BCL2L2-PABPN110099.099Cercocebus_atys
ENSMOCG00000018557Gm205216796.364ENSCLAG00000012423PABPN19179.715Chinchilla_lanigera
ENSMOCG00000018557Gm2052110095.752ENSCSAG00000016036PABPN110095.752Chlorocebus_sabaeus
ENSMOCG00000018557Gm205219686.076ENSCHOG00000004798BCL2L2-PABPN18788.557Choloepus_hoffmanni
ENSMOCG00000018557Gm205218398.529ENSCPBG00000026060-9492.814Chrysemys_picta_bellii
ENSMOCG00000018557Gm205218671.631ENSCING00000012468-8464.677Ciona_intestinalis
ENSMOCG00000018557Gm205217967.692ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSMOCG00000018557Gm205219682.803ENSCANG00000030980-9477.978Colobus_angolensis_palliatus
ENSMOCG00000018557Gm2052110099.099ENSCANG00000009750BCL2L2-PABPN110099.099Colobus_angolensis_palliatus
ENSMOCG00000018557Gm2052110099.669ENSCGRG00001019696Pabpn110099.669Cricetulus_griseus_chok1gshd
ENSMOCG00000018557Gm205219797.484ENSCGRG00000011102Pabpn110099.438Cricetulus_griseus_crigri
ENSMOCG00000018557Gm205219090.476ENSCSEG00000008774pabpn19971.245Cynoglossus_semilaevis
ENSMOCG00000018557Gm205218891.034ENSCVAG00000003152pabpn19971.245Cyprinodon_variegatus
ENSMOCG00000018557Gm205218761.268ENSDARG00000087996pabpn1l7266.387Danio_rerio
ENSMOCG00000018557Gm205219091.837ENSDARG00000045373pabpn19972.961Danio_rerio
ENSMOCG00000018557Gm2052110097.059ENSDNOG00000023682PABPN110097.059Dasypus_novemcinctus
ENSMOCG00000018557Gm2052110096.732ENSDORG00000028966-10096.732Dipodomys_ordii
ENSMOCG00000018557Gm205218190.977ENSDORG00000023928-8590.984Dipodomys_ordii
ENSMOCG00000018557Gm205219369.935FBgn0005648Pabp28959.903Drosophila_melanogaster
ENSMOCG00000018557Gm205219085.714ENSEBUG00000002322pabpn18379.381Eptatretus_burgeri
ENSMOCG00000018557Gm2052110097.059ENSEASG00005011716PABPN110097.059Equus_asinus_asinus
ENSMOCG00000018557Gm205219996.711ENSECAG00000011652PABPN19996.939Equus_caballus
ENSMOCG00000018557Gm205219691.772ENSEEUG00000012973-7293.839Erinaceus_europaeus
ENSMOCG00000018557Gm205219093.878ENSELUG00000022654pabpn18584.466Esox_lucius
ENSMOCG00000018557Gm2052110097.059ENSFCAG00000031922PABPN110097.059Felis_catus
ENSMOCG00000018557Gm205218398.529ENSFDAG00000018381BCL2L2-PABPN110097.753Fukomys_damarensis
ENSMOCG00000018557Gm205219089.116ENSFHEG00000007215pabpn19969.957Fundulus_heteroclitus
ENSMOCG00000018557Gm205219092.517ENSGMOG00000003922pabpn16682.474Gadus_morhua
ENSMOCG00000018557Gm205218897.931ENSGALG00000052930-6090.291Gallus_gallus
ENSMOCG00000018557Gm205218891.034ENSGAFG00000017099pabpn19971.795Gambusia_affinis
ENSMOCG00000018557Gm205219091.216ENSGACG00000002167pabpn19969.388Gasterosteus_aculeatus
ENSMOCG00000018557Gm205219082.313ENSGGOG00000039675-7680.976Gorilla_gorilla
ENSMOCG00000018557Gm205218985.616ENSGGOG00000025919-9883.108Gorilla_gorilla
ENSMOCG00000018557Gm2052110097.059ENSGGOG00000022683-10097.059Gorilla_gorilla
ENSMOCG00000018557Gm205219091.156ENSHBUG00000019523pabpn19972.103Haplochromis_burtoni
ENSMOCG00000018557Gm2052110096.405ENSHGLG00000002927-10096.405Heterocephalus_glaber_female
ENSMOCG00000018557Gm205217680.000ENSHGLG00000009842-9376.048Heterocephalus_glaber_female
ENSMOCG00000018557Gm205219685.350ENSHGLG00000018588-7180.952Heterocephalus_glaber_female
ENSMOCG00000018557Gm205218393.382ENSHGLG00100018935-9487.719Heterocephalus_glaber_male
ENSMOCG00000018557Gm205219698.754ENSHGLG00100006673-10098.315Heterocephalus_glaber_male
ENSMOCG00000018557Gm205219685.350ENSHGLG00100015565-7280.952Heterocephalus_glaber_male
ENSMOCG00000018557Gm205219090.476ENSHCOG00000004655pabpn19971.674Hippocampus_comes
ENSMOCG00000018557Gm205219089.796ENSIPUG00000000180-8680.303Ictalurus_punctatus
ENSMOCG00000018557Gm205219091.837ENSIPUG00000008085PABPN19972.532Ictalurus_punctatus
ENSMOCG00000018557Gm205218399.265ENSSTOG00000029847BCL2L2-PABPN110098.876Ictidomys_tridecemlineatus
ENSMOCG00000018557Gm205218399.265ENSJJAG00000023507Gm2052110098.876Jaculus_jaculus
ENSMOCG00000018557Gm205219090.476ENSKMAG00000018748pabpn18680.676Kryptolebias_marmoratus
ENSMOCG00000018557Gm205219091.156ENSLBEG00000027266pabpn19972.103Labrus_bergylta
ENSMOCG00000018557Gm205219193.377ENSLACG00000000646pabpn17889.326Latimeria_chalumnae
ENSMOCG00000018557Gm205219071.429ENSLOCG00000004694pabpn1l9565.217Lepisosteus_oculatus
ENSMOCG00000018557Gm205219092.517ENSLOCG00000000796pabpn16983.505Lepisosteus_oculatus
ENSMOCG00000018557Gm205216698.165ENSLAFG00000031227-10098.013Loxodonta_africana
ENSMOCG00000018557Gm205216094.949ENSMFAG00000031355-9992.199Macaca_fascicularis
ENSMOCG00000018557Gm2052110099.099ENSMFAG00000032183BCL2L2-PABPN110099.099Macaca_fascicularis
ENSMOCG00000018557Gm205219775.472ENSMMUG00000048382-9574.296Macaca_mulatta
ENSMOCG00000018557Gm2052110099.099ENSMMUG00000014747BCL2L2-PABPN110099.099Macaca_mulatta
ENSMOCG00000018557Gm205218781.119ENSMNEG00000035750-9992.199Macaca_nemestrina
ENSMOCG00000018557Gm2052110099.099ENSMNEG00000045065BCL2L2-PABPN110099.099Macaca_nemestrina
ENSMOCG00000018557Gm2052110099.099ENSMLEG00000043862BCL2L2-PABPN110099.099Mandrillus_leucophaeus
ENSMOCG00000018557Gm205219771.575ENSMLEG00000034623-9990.071Mandrillus_leucophaeus
ENSMOCG00000018557Gm205219091.156ENSMAMG00000007979pabpn17871.739Mastacembelus_armatus
ENSMOCG00000018557Gm205219091.156ENSMZEG00005011904pabpn17671.493Maylandia_zebra
ENSMOCG00000018557Gm2052110099.399ENSMAUG00000007383Gm2052110099.399Mesocricetus_auratus
ENSMOCG00000018557Gm2052110099.099ENSMICG00000010002BCL2L2-PABPN110099.099Microcebus_murinus
ENSMOCG00000018557Gm205219091.156ENSMMOG00000005405pabpn19972.532Mola_mola
ENSMOCG00000018557Gm205219097.279ENSMODG00000004535-9191.367Monodelphis_domestica
ENSMOCG00000018557Gm205219091.156ENSMALG00000019612pabpn17771.304Monopterus_albus
ENSMOCG00000018557Gm2052110098.498MGP_CAROLIEiJ_G0019276Gm2052110098.498Mus_caroli
ENSMOCG00000018557Gm2052110098.675MGP_CAROLIEiJ_G0019277Pabpn110098.675Mus_caroli
ENSMOCG00000018557Gm2052110098.799ENSMUSG00000092232Gm2052110098.799Mus_musculus
ENSMOCG00000018557Gm2052110099.007ENSMUSG00000022194Pabpn110099.007Mus_musculus
ENSMOCG00000018557Gm2052110098.799MGP_PahariEiJ_G0030294Gm2052110098.799Mus_pahari
ENSMOCG00000018557Gm2052110099.007MGP_PahariEiJ_G0030295Pabpn1100100.000Mus_pahari
ENSMOCG00000018557Gm2052110098.799MGP_SPRETEiJ_G0020165Gm2052110098.799Mus_spretus
ENSMOCG00000018557Gm2052110099.007MGP_SPRETEiJ_G0020166Pabpn110099.007Mus_spretus
ENSMOCG00000018557Gm205218399.265ENSMPUG00000006775-9998.795Mustela_putorius_furo
ENSMOCG00000018557Gm205219095.238ENSMLUG00000012452-7091.549Myotis_lucifugus
ENSMOCG00000018557Gm205219097.279ENSMLUG00000003800-10096.825Myotis_lucifugus
ENSMOCG00000018557Gm205218995.205ENSMLUG00000028677-9279.783Myotis_lucifugus
ENSMOCG00000018557Gm2052110099.099ENSNGAG00000019529Gm2052110099.099Nannospalax_galili
ENSMOCG00000018557Gm205219091.156ENSNBRG00000023955pabpn19480.952Neolamprologus_brichardi
ENSMOCG00000018557Gm205216573.585ENSNLEG00000035292-9971.622Nomascus_leucogenys
ENSMOCG00000018557Gm2052110099.099ENSNLEG00000015007-10099.099Nomascus_leucogenys
ENSMOCG00000018557Gm205218687.943ENSNLEG00000030598-7981.517Nomascus_leucogenys
ENSMOCG00000018557Gm2052110098.799ENSODEG00000002083BCL2L2-PABPN110098.799Octodon_degus
ENSMOCG00000018557Gm205219089.116ENSODEG00000003739-9583.032Octodon_degus
ENSMOCG00000018557Gm205218386.029ENSODEG00000011555-8985.629Octodon_degus
ENSMOCG00000018557Gm205219091.156ENSONIG00000008112pabpn17671.493Oreochromis_niloticus
ENSMOCG00000018557Gm205216398.077ENSOANG00000009218-10095.205Ornithorhynchus_anatinus
ENSMOCG00000018557Gm205219997.000ENSOCUG00000016174PABPN110097.000Oryctolagus_cuniculus
ENSMOCG00000018557Gm205219091.156ENSORLG00000027900pabpn18478.922Oryzias_latipes
ENSMOCG00000018557Gm205219091.156ENSORLG00020004681pabpn16781.281Oryzias_latipes_hni
ENSMOCG00000018557Gm205219091.156ENSORLG00015000018pabpn18682.039Oryzias_latipes_hsok
ENSMOCG00000018557Gm205219091.156ENSOMEG00000016618pabpn17278.431Oryzias_melastigma
ENSMOCG00000018557Gm2052110097.059ENSOGAG00000008710PABPN110097.059Otolemur_garnettii
ENSMOCG00000018557Gm2052110099.099ENSOARG00000019336BCL2L2-PABPN19299.099Ovis_aries
ENSMOCG00000018557Gm205217683.200ENSPPAG00000039421-9382.635Pan_paniscus
ENSMOCG00000018557Gm2052110099.099ENSPPAG00000028984BCL2L2-PABPN110099.099Pan_paniscus
ENSMOCG00000018557Gm2052110097.059ENSPPRG00000010567PABPN110097.059Panthera_pardus
ENSMOCG00000018557Gm205218399.265ENSPTIG00000001063BCL2L2-PABPN110098.876Panthera_tigris_altaica
ENSMOCG00000018557Gm205219082.313ENSPTRG00000047273-9974.007Pan_troglodytes
ENSMOCG00000018557Gm2052110099.099ENSPTRG00000006167BCL2L210099.099Pan_troglodytes
ENSMOCG00000018557Gm2052110099.099ENSPANG00000021100BCL2L2-PABPN110099.099Papio_anubis
ENSMOCG00000018557Gm205219776.370ENSPANG00000023326-9992.199Papio_anubis
ENSMOCG00000018557Gm205219093.243ENSPKIG00000008144-7773.913Paramormyrops_kingsleyae
ENSMOCG00000018557Gm205219071.622ENSPKIG00000008340pabpn1l9263.317Paramormyrops_kingsleyae
ENSMOCG00000018557Gm205219093.197ENSPKIG00000018052pabpn18682.524Paramormyrops_kingsleyae
ENSMOCG00000018557Gm205216690.826ENSPSIG00000011959-8688.034Pelodiscus_sinensis
ENSMOCG00000018557Gm205219090.476ENSPMGG00000022027pabpn18071.041Periophthalmus_magnuspinnatus
ENSMOCG00000018557Gm2052110099.700ENSPEMG00000008332Gm2052110099.700Peromyscus_maniculatus_bairdii
ENSMOCG00000018557Gm205218687.943ENSPMAG00000006212pabpn18476.355Petromyzon_marinus
ENSMOCG00000018557Gm205219097.279ENSPCIG00000027751-9291.459Phascolarctos_cinereus
ENSMOCG00000018557Gm205218891.034ENSPFOG00000010351pabpn19970.168Poecilia_formosa
ENSMOCG00000018557Gm205218891.034ENSPLAG00000022696pabpn17870.563Poecilia_latipinna
ENSMOCG00000018557Gm205218891.034ENSPMEG00000020856pabpn19970.940Poecilia_mexicana
ENSMOCG00000018557Gm205218891.034ENSPREG00000011278pabpn19970.940Poecilia_reticulata
ENSMOCG00000018557Gm205219099.320ENSPPYG00000005663PABPN19192.157Pongo_abelii
ENSMOCG00000018557Gm205219079.195ENSPCAG00000005902PABPN19283.333Procavia_capensis
ENSMOCG00000018557Gm2052110097.386ENSPCOG00000028047BCL2L2-PABPN110097.386Propithecus_coquereli
ENSMOCG00000018557Gm205219099.320ENSPVAG00000005270PABPN19287.857Pteropus_vampyrus
ENSMOCG00000018557Gm205219091.156ENSPNYG00000013182pabpn19972.103Pundamilia_nyererei
ENSMOCG00000018557Gm205219092.517ENSPNAG00000023526pabpn19973.391Pygocentrus_nattereri
ENSMOCG00000018557Gm205218673.239ENSPNAG00000021666pabpn1l9464.179Pygocentrus_nattereri
ENSMOCG00000018557Gm2052110099.007ENSRNOG00000042195Pabpn110099.007Rattus_norvegicus
ENSMOCG00000018557Gm205219683.439ENSRBIG00000039547-9278.339Rhinopithecus_bieti
ENSMOCG00000018557Gm205219699.065ENSRBIG00000040762BCL2L2-PABPN19999.065Rhinopithecus_bieti
ENSMOCG00000018557Gm205219086.395ENSRBIG00000042811-8884.834Rhinopithecus_bieti
ENSMOCG00000018557Gm205219698.754ENSRROG00000045535BCL2L2-PABPN110098.876Rhinopithecus_roxellana
ENSMOCG00000018557Gm205219078.231ENSRROG00000036409-6781.567Rhinopithecus_roxellana
ENSMOCG00000018557Gm205219683.439ENSRROG00000040409-7584.878Rhinopithecus_roxellana
ENSMOCG00000018557Gm2052110095.376ENSSBOG00000026930BCL2L2-PABPN19998.795Saimiri_boliviensis_boliviensis
ENSMOCG00000018557Gm205219096.622ENSSHAG00000014841-8796.296Sarcophilus_harrisii
ENSMOCG00000018557Gm205219074.830ENSSHAG00000007707-8973.934Sarcophilus_harrisii
ENSMOCG00000018557Gm205219092.517ENSSFOG00015012565pabpn19676.959Scleropages_formosus
ENSMOCG00000018557Gm205219091.837ENSSFOG00015014718pabpn19972.532Scleropages_formosus
ENSMOCG00000018557Gm205219070.946ENSSFOG00015015833pabpn1l8863.819Scleropages_formosus
ENSMOCG00000018557Gm205219091.156ENSSMAG00000020157pabpn19972.103Scophthalmus_maximus
ENSMOCG00000018557Gm205219091.156ENSSDUG00000020582pabpn17771.304Seriola_dumerili
ENSMOCG00000018557Gm205219091.156ENSSLDG00000007118pabpn19972.103Seriola_lalandi_dorsalis
ENSMOCG00000018557Gm205218297.778ENSSPUG00000018308-9491.617Sphenodon_punctatus
ENSMOCG00000018557Gm205219091.156ENSSPAG00000021658pabpn19972.103Stegastes_partitus
ENSMOCG00000018557Gm205219080.272ENSSSCG00000034805-7668.137Sus_scrofa
ENSMOCG00000018557Gm2052110098.799ENSSSCG00000002023PABPN110098.799Sus_scrofa
ENSMOCG00000018557Gm205216373.786ENSSSCG00000038472-9154.491Sus_scrofa
ENSMOCG00000018557Gm205219092.517ENSTRUG00000023664pabpn19972.961Takifugu_rubripes
ENSMOCG00000018557Gm205219092.517ENSTNIG00000005369pabpn19378.744Tetraodon_nigroviridis
ENSMOCG00000018557Gm2052110096.405ENSUAMG00000024460PABPN110096.405Ursus_americanus
ENSMOCG00000018557Gm2052110099.099ENSUMAG00000014288BCL2L2-PABPN110099.099Ursus_maritimus
ENSMOCG00000018557Gm2052110099.099ENSVVUG00000019912BCL2L2-PABPN110099.099Vulpes_vulpes
ENSMOCG00000018557Gm205219097.279ENSXETG00000014597pabpn16691.878Xenopus_tropicalis
ENSMOCG00000018557Gm205217976.744ENSXCOG00000005158pabpn18980.263Xiphophorus_couchianus
ENSMOCG00000018557Gm205218891.034ENSXMAG00000006196pabpn19971.368Xiphophorus_maculatus

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