EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000018583 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 49836 bases
Position: chrJH996484.1:2195223-2245058
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000021125	ResIII	PF04851.15	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000024954	-	2978	-	ENSMOCP00000021125	874 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000018583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000018583's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000018583	-	54	30.616	ENSMOCG00000001778	Rad54l	66	30.815
ENSMOCG00000018583	-	84	65.707	ENSMOCG00000014004	-	88	63.490
ENSMOCG00000018583	-	55	34.701	ENSMOCG00000017142	Smarcad1	50	34.701
ENSMOCG00000018583	-	57	37.217	ENSMOCG00000019342	Hells	68	37.217
ENSMOCG00000018583	-	55	43.595	ENSMOCG00000006305	Chd1l	50	43.388

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000018583	-	100	96.339	ENSG00000177200	CHD9	100	89.600	Homo_sapiens
ENSMOCG00000018583	-	100	95.538	ENSCLAG00000007137	CHD9	100	95.538	Chinchilla_lanigera
ENSMOCG00000018583	-	100	98.284	ENSCGRG00000012850	Chd9	100	98.284	Cricetulus_griseus_crigri
ENSMOCG00000018583	-	100	96.110	ENSHGLG00000014938	CHD9	100	96.110	Heterocephalus_glaber_female
ENSMOCG00000018583	-	100	96.110	ENSHGLG00100001011	-	100	96.110	Heterocephalus_glaber_male
ENSMOCG00000018583	-	100	95.995	ENSSTOG00000022273	CHD9	100	95.995	Ictidomys_tridecemlineatus
ENSMOCG00000018583	-	100	97.941	ENSMAUG00000011087	-	100	97.941	Mesocricetus_auratus
ENSMOCG00000018583	-	100	96.911	ENSMUSG00000056608	Chd9	100	96.911	Mus_musculus
ENSMOCG00000018583	-	100	96.682	ENSNGAG00000019957	-	100	96.682	Nannospalax_galili
ENSMOCG00000018583	-	99	94.682	ENSRNOG00000049302	Chd9	55	94.682	Rattus_norvegicus