EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000018743 (Gene tree)
Gene ID: 101993358
Gene Symbol: Stau1
Alias: 5830401L18Rik
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 42356 bases
Position: chrLG8:11541152-11583507
Accession: 101993358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000021363	dsrm	PF00035.26	2.7e-29	1	2
ENSMOCP00000021363	dsrm	PF00035.26	2.7e-29	2	2
ENSMOCP00000021361	dsrm	PF00035.26	2.2e-26	1	2
ENSMOCP00000021361	dsrm	PF00035.26	2.2e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000025194	-	1551	-	ENSMOCP00000021363	516 (aa)	-	-
ENSMOCT00000025192	-	2795	XM_005362866	ENSMOCP00000021361	495 (aa)	XP_005362923	UPI00038C6407

Gene Model

Click here to download ENSMOCG00000018743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000018743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000018743	Stau1	85	46.712	ENSMOCG00000001037	Stau2	87	47.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000018743	Stau1	100	92.727	ENSG00000124214	STAU1	99	92.727	Homo_sapiens
ENSMOCG00000018743	Stau1	99	69.800	ENSAPOG00000017260	stau1	71	69.800	Acanthochromis_polyacanthus
ENSMOCG00000018743	Stau1	99	89.817	ENSAMEG00000013681	STAU1	70	90.349	Ailuropoda_melanoleuca
ENSMOCG00000018743	Stau1	99	71.515	ENSACIG00000015918	stau1	71	72.784	Amphilophus_citrinellus
ENSMOCG00000018743	Stau1	99	70.800	ENSAOCG00000012224	stau1	71	70.800	Amphiprion_ocellaris
ENSMOCG00000018743	Stau1	99	71.000	ENSAPEG00000012308	stau1	71	71.000	Amphiprion_percula
ENSMOCG00000018743	Stau1	99	71.026	ENSATEG00000024600	stau1	73	71.575	Anabas_testudineus
ENSMOCG00000018743	Stau1	99	84.521	ENSAPLG00000010527	STAU1	69	84.521	Anas_platyrhynchos
ENSMOCG00000018743	Stau1	99	84.553	ENSACAG00000015909	STAU1	70	84.553	Anolis_carolinensis
ENSMOCG00000018743	Stau1	100	92.929	ENSANAG00000032714	STAU1	99	86.503	Aotus_nancymaae
ENSMOCG00000018743	Stau1	99	70.200	ENSACLG00000012270	stau1	71	70.200	Astatotilapia_calliptera
ENSMOCG00000018743	Stau1	100	69.076	ENSAMXG00000016812	stau1	85	69.028	Astyanax_mexicanus
ENSMOCG00000018743	Stau1	100	89.697	ENSBTAG00000000241	STAU1	85	89.775	Bos_taurus
ENSMOCG00000018743	Stau1	100	92.727	ENSCJAG00000016233	STAU1	85	92.229	Callithrix_jacchus
ENSMOCG00000018743	Stau1	100	90.707	ENSCAFG00000011347	STAU1	83	90.798	Canis_familiaris
ENSMOCG00000018743	Stau1	100	89.442	ENSCAFG00020017123	STAU1	82	89.516	Canis_lupus_dingo
ENSMOCG00000018743	Stau1	100	89.697	ENSCHIG00000001799	-	100	83.434	Capra_hircus
ENSMOCG00000018743	Stau1	100	89.697	ENSTSYG00000036179	-	85	89.980	Carlito_syrichta
ENSMOCG00000018743	Stau1	100	89.091	ENSCAPG00000017041	STAU1	99	89.938	Cavia_aperea
ENSMOCG00000018743	Stau1	100	89.697	ENSCPOG00000005566	STAU1	100	89.697	Cavia_porcellus
ENSMOCG00000018743	Stau1	100	92.727	ENSCCAG00000034339	STAU1	85	92.727	Cebus_capucinus
ENSMOCG00000018743	Stau1	100	93.131	ENSCATG00000028474	STAU1	99	93.131	Cercocebus_atys
ENSMOCG00000018743	Stau1	100	74.447	ENSCLAG00000002784	-	98	75.670	Chinchilla_lanigera
ENSMOCG00000018743	Stau1	100	93.737	ENSCLAG00000006516	-	100	93.737	Chinchilla_lanigera
ENSMOCG00000018743	Stau1	100	91.919	ENSCSAG00000014986	STAU1	99	92.229	Chlorocebus_sabaeus
ENSMOCG00000018743	Stau1	100	90.524	ENSCHOG00000001511	STAU1	85	90.524	Choloepus_hoffmanni
ENSMOCG00000018743	Stau1	99	84.350	ENSCPBG00000026741	STAU1	71	84.350	Chrysemys_picta_bellii
ENSMOCG00000018743	Stau1	100	91.919	ENSCANG00000039220	STAU1	99	83.669	Colobus_angolensis_palliatus
ENSMOCG00000018743	Stau1	100	98.182	ENSCGRG00001013453	Stau1	100	98.182	Cricetulus_griseus_chok1gshd
ENSMOCG00000018743	Stau1	100	98.182	ENSCGRG00000007216	Stau1	100	98.182	Cricetulus_griseus_crigri
ENSMOCG00000018743	Stau1	99	64.777	ENSCSEG00000000792	stau1	68	65.524	Cynoglossus_semilaevis
ENSMOCG00000018743	Stau1	99	68.496	ENSCVAG00000005906	stau1	86	69.168	Cyprinodon_variegatus
ENSMOCG00000018743	Stau1	99	70.060	ENSDARG00000044182	stau1	78	70.060	Danio_rerio
ENSMOCG00000018743	Stau1	100	90.524	ENSDNOG00000014933	STAU1	83	90.524	Dasypus_novemcinctus
ENSMOCG00000018743	Stau1	100	88.889	ENSDORG00000030220	Stau1	100	88.889	Dipodomys_ordii
ENSMOCG00000018743	Stau1	84	90.435	ENSETEG00000018235	STAU1	72	90.435	Echinops_telfairi
ENSMOCG00000018743	Stau1	100	92.121	ENSEASG00005023343	STAU1	88	91.622	Equus_asinus_asinus
ENSMOCG00000018743	Stau1	100	90.909	ENSECAG00000012894	STAU1	85	91.002	Equus_caballus
ENSMOCG00000018743	Stau1	87	90.633	ENSEEUG00000014344	STAU1	68	90.633	Erinaceus_europaeus
ENSMOCG00000018743	Stau1	99	69.685	ENSELUG00000002529	stau1	77	69.685	Esox_lucius
ENSMOCG00000018743	Stau1	100	91.515	ENSFCAG00000001447	STAU1	99	84.458	Felis_catus
ENSMOCG00000018743	Stau1	99	82.317	ENSFALG00000012940	STAU1	70	82.546	Ficedula_albicollis
ENSMOCG00000018743	Stau1	100	92.727	ENSFDAG00000014119	-	100	92.727	Fukomys_damarensis
ENSMOCG00000018743	Stau1	99	69.028	ENSFDAG00000020837	-	98	69.028	Fukomys_damarensis
ENSMOCG00000018743	Stau1	99	69.800	ENSFHEG00000013517	stau1	85	70.637	Fundulus_heteroclitus
ENSMOCG00000018743	Stau1	99	60.470	ENSGMOG00000016850	stau1	71	60.470	Gadus_morhua
ENSMOCG00000018743	Stau1	99	84.929	ENSGALG00000004736	STAU1	70	84.568	Gallus_gallus
ENSMOCG00000018743	Stau1	99	69.940	ENSGAFG00000010437	stau1	71	69.940	Gambusia_affinis
ENSMOCG00000018743	Stau1	99	70.541	ENSGACG00000001352	stau1	72	70.259	Gasterosteus_aculeatus
ENSMOCG00000018743	Stau1	99	83.130	ENSGAGG00000009825	STAU1	70	83.368	Gopherus_agassizii
ENSMOCG00000018743	Stau1	100	92.929	ENSGGOG00000025351	STAU1	100	92.877	Gorilla_gorilla
ENSMOCG00000018743	Stau1	99	70.400	ENSHBUG00000023668	stau1	71	70.400	Haplochromis_burtoni
ENSMOCG00000018743	Stau1	100	92.525	ENSHGLG00000008730	STAU1	100	92.638	Heterocephalus_glaber_female
ENSMOCG00000018743	Stau1	100	93.737	ENSHGLG00100000098	STAU1	100	93.737	Heterocephalus_glaber_male
ENSMOCG00000018743	Stau1	99	68.612	ENSHCOG00000018461	stau1	70	69.057	Hippocampus_comes
ENSMOCG00000018743	Stau1	94	69.510	ENSIPUG00000023725	stau1	70	69.978	Ictalurus_punctatus
ENSMOCG00000018743	Stau1	100	92.727	ENSSTOG00000003634	STAU1	100	92.843	Ictidomys_tridecemlineatus
ENSMOCG00000018743	Stau1	100	91.515	ENSJJAG00000020032	Stau1	100	91.820	Jaculus_jaculus
ENSMOCG00000018743	Stau1	99	68.421	ENSKMAG00000007135	stau1	71	69.091	Kryptolebias_marmoratus
ENSMOCG00000018743	Stau1	99	68.119	ENSLBEG00000020172	stau1	71	68.119	Labrus_bergylta
ENSMOCG00000018743	Stau1	99	78.384	ENSLACG00000016157	STAU1	70	77.510	Latimeria_chalumnae
ENSMOCG00000018743	Stau1	99	74.798	ENSLOCG00000003134	stau1	71	74.798	Lepisosteus_oculatus
ENSMOCG00000018743	Stau1	100	89.495	ENSLAFG00000003238	STAU1	96	89.775	Loxodonta_africana
ENSMOCG00000018743	Stau1	100	93.131	ENSMFAG00000040931	STAU1	100	95.588	Macaca_fascicularis
ENSMOCG00000018743	Stau1	100	93.131	ENSMMUG00000002302	STAU1	100	95.588	Macaca_mulatta
ENSMOCG00000018743	Stau1	100	93.131	ENSMNEG00000033821	STAU1	99	93.131	Macaca_nemestrina
ENSMOCG00000018743	Stau1	100	92.121	ENSMLEG00000031383	STAU1	85	92.434	Mandrillus_leucophaeus
ENSMOCG00000018743	Stau1	99	71.429	ENSMAMG00000017586	stau1	74	71.429	Mastacembelus_armatus
ENSMOCG00000018743	Stau1	99	70.200	ENSMZEG00005015605	stau1	81	70.757	Maylandia_zebra
ENSMOCG00000018743	Stau1	99	84.725	ENSMGAG00000004719	STAU1	69	84.725	Meleagris_gallopavo
ENSMOCG00000018743	Stau1	100	97.374	ENSMAUG00000013846	Stau1	100	97.374	Mesocricetus_auratus
ENSMOCG00000018743	Stau1	100	91.919	ENSMICG00000001995	STAU1	85	91.919	Microcebus_murinus
ENSMOCG00000018743	Stau1	100	68.750	ENSMMOG00000015455	stau1	97	70.393	Mola_mola
ENSMOCG00000018743	Stau1	100	87.071	ENSMODG00000016276	STAU1	73	87.117	Monodelphis_domestica
ENSMOCG00000018743	Stau1	99	70.800	ENSMALG00000000045	stau1	71	70.800	Monopterus_albus
ENSMOCG00000018743	Stau1	100	97.172	MGP_CAROLIEiJ_G0024699	Stau1	100	97.172	Mus_caroli
ENSMOCG00000018743	Stau1	100	96.768	ENSMUSG00000039536	Stau1	100	96.768	Mus_musculus
ENSMOCG00000018743	Stau1	100	97.172	MGP_PahariEiJ_G0026141	Stau1	100	97.172	Mus_pahari
ENSMOCG00000018743	Stau1	100	96.364	MGP_SPRETEiJ_G0025619	Stau1	100	96.364	Mus_spretus
ENSMOCG00000018743	Stau1	99	91.039	ENSMPUG00000017581	STAU1	72	91.925	Mustela_putorius_furo
ENSMOCG00000018743	Stau1	100	90.101	ENSMLUG00000008407	STAU1	83	90.389	Myotis_lucifugus
ENSMOCG00000018743	Stau1	100	95.354	ENSNGAG00000007108	Stau1	100	95.354	Nannospalax_galili
ENSMOCG00000018743	Stau1	99	70.400	ENSNBRG00000017596	stau1	71	70.400	Neolamprologus_brichardi
ENSMOCG00000018743	Stau1	100	92.525	ENSNLEG00000006955	STAU1	99	92.525	Nomascus_leucogenys
ENSMOCG00000018743	Stau1	95	87.821	ENSMEUG00000003263	STAU1	80	87.879	Notamacropus_eugenii
ENSMOCG00000018743	Stau1	100	90.121	ENSOPRG00000014569	STAU1	86	90.204	Ochotona_princeps
ENSMOCG00000018743	Stau1	100	91.717	ENSODEG00000006523	STAU1	99	93.224	Octodon_degus
ENSMOCG00000018743	Stau1	99	70.600	ENSONIG00000004152	stau1	68	70.600	Oreochromis_niloticus
ENSMOCG00000018743	Stau1	99	84.146	ENSOANG00000006394	STAU1	70	84.146	Ornithorhynchus_anatinus
ENSMOCG00000018743	Stau1	100	89.899	ENSOCUG00000006214	STAU1	85	89.980	Oryctolagus_cuniculus
ENSMOCG00000018743	Stau1	99	69.277	ENSOMEG00000002388	stau1	71	69.857	Oryzias_melastigma
ENSMOCG00000018743	Stau1	100	91.717	ENSOGAG00000002127	STAU1	83	92.025	Otolemur_garnettii
ENSMOCG00000018743	Stau1	100	63.000	ENSOGAG00000028222	-	98	63.000	Otolemur_garnettii
ENSMOCG00000018743	Stau1	100	89.697	ENSOARG00000012204	STAU1	83	89.775	Ovis_aries
ENSMOCG00000018743	Stau1	100	92.929	ENSPPAG00000032023	STAU1	100	92.877	Pan_paniscus
ENSMOCG00000018743	Stau1	100	91.515	ENSPPRG00000003436	STAU1	99	91.616	Panthera_pardus
ENSMOCG00000018743	Stau1	100	91.515	ENSPTIG00000011768	STAU1	99	90.323	Panthera_tigris_altaica
ENSMOCG00000018743	Stau1	100	92.929	ENSPTRG00000023130	STAU1	100	92.877	Pan_troglodytes
ENSMOCG00000018743	Stau1	100	92.323	ENSPANG00000020560	STAU1	99	87.702	Papio_anubis
ENSMOCG00000018743	Stau1	99	71.200	ENSPKIG00000024588	stau1	71	71.200	Paramormyrops_kingsleyae
ENSMOCG00000018743	Stau1	99	82.927	ENSPSIG00000010731	STAU1	70	83.162	Pelodiscus_sinensis
ENSMOCG00000018743	Stau1	99	70.683	ENSPMGG00000018553	stau1	98	68.660	Periophthalmus_magnuspinnatus
ENSMOCG00000018743	Stau1	100	98.384	ENSPEMG00000022045	Stau1	100	98.384	Peromyscus_maniculatus_bairdii
ENSMOCG00000018743	Stau1	100	88.081	ENSPCIG00000023269	STAU1	99	82.222	Phascolarctos_cinereus
ENSMOCG00000018743	Stau1	99	70.200	ENSPFOG00000017253	stau1	71	70.200	Poecilia_formosa
ENSMOCG00000018743	Stau1	63	64.013	ENSPLAG00000014829	stau1	77	67.647	Poecilia_latipinna
ENSMOCG00000018743	Stau1	93	69.231	ENSPMEG00000007495	stau1	67	69.697	Poecilia_mexicana
ENSMOCG00000018743	Stau1	99	69.600	ENSPREG00000003477	stau1	71	69.600	Poecilia_reticulata
ENSMOCG00000018743	Stau1	100	91.717	ENSPPYG00000011111	STAU1	85	92.025	Pongo_abelii
ENSMOCG00000018743	Stau1	93	81.169	ENSPCAG00000002459	STAU1	84	82.018	Procavia_capensis
ENSMOCG00000018743	Stau1	100	92.121	ENSPCOG00000027746	STAU1	99	92.121	Propithecus_coquereli
ENSMOCG00000018743	Stau1	83	93.729	ENSPVAG00000015019	STAU1	71	93.729	Pteropus_vampyrus
ENSMOCG00000018743	Stau1	99	70.400	ENSPNYG00000014436	stau1	71	70.400	Pundamilia_nyererei
ENSMOCG00000018743	Stau1	99	69.200	ENSPNAG00000011323	stau1	78	69.062	Pygocentrus_nattereri
ENSMOCG00000018743	Stau1	100	97.778	ENSRNOG00000007781	Stau1	100	97.778	Rattus_norvegicus
ENSMOCG00000018743	Stau1	100	93.131	ENSRBIG00000037345	STAU1	99	93.131	Rhinopithecus_bieti
ENSMOCG00000018743	Stau1	100	92.121	ENSRROG00000039008	STAU1	99	92.245	Rhinopithecus_roxellana
ENSMOCG00000018743	Stau1	100	92.727	ENSSBOG00000034448	STAU1	99	88.485	Saimiri_boliviensis_boliviensis
ENSMOCG00000018743	Stau1	100	87.273	ENSSHAG00000009492	STAU1	83	87.321	Sarcophilus_harrisii
ENSMOCG00000018743	Stau1	99	73.387	ENSSFOG00015021497	stau1	85	70.349	Scleropages_formosus
ENSMOCG00000018743	Stau1	99	70.600	ENSSMAG00000017410	stau1	71	71.166	Scophthalmus_maximus
ENSMOCG00000018743	Stau1	99	71.600	ENSSDUG00000019439	stau1	71	71.600	Seriola_dumerili
ENSMOCG00000018743	Stau1	99	71.600	ENSSLDG00000025040	stau1	71	71.600	Seriola_lalandi_dorsalis
ENSMOCG00000018743	Stau1	99	83.537	ENSSPUG00000017983	STAU1	73	83.673	Sphenodon_punctatus
ENSMOCG00000018743	Stau1	99	71.000	ENSSPAG00000019275	stau1	71	71.000	Stegastes_partitus
ENSMOCG00000018743	Stau1	100	90.909	ENSSSCG00000027444	STAU1	99	91.002	Sus_scrofa
ENSMOCG00000018743	Stau1	99	84.146	ENSTGUG00000008784	STAU1	82	84.318	Taeniopygia_guttata
ENSMOCG00000018743	Stau1	99	70.909	ENSTRUG00000005837	stau1	70	72.371	Takifugu_rubripes
ENSMOCG00000018743	Stau1	99	70.060	ENSTNIG00000014732	stau1	73	70.060	Tetraodon_nigroviridis
ENSMOCG00000018743	Stau1	100	78.024	ENSTBEG00000009404	STAU1	85	78.024	Tupaia_belangeri
ENSMOCG00000018743	Stau1	95	87.179	ENSTTRG00000004285	STAU1	80	87.446	Tursiops_truncatus
ENSMOCG00000018743	Stau1	100	88.645	ENSUAMG00000025449	STAU1	99	88.710	Ursus_americanus
ENSMOCG00000018743	Stau1	75	86.737	ENSUMAG00000024475	STAU1	87	87.601	Ursus_maritimus
ENSMOCG00000018743	Stau1	100	90.505	ENSVPAG00000001313	STAU1	85	90.593	Vicugna_pacos
ENSMOCG00000018743	Stau1	100	89.641	ENSVVUG00000022325	STAU1	73	89.718	Vulpes_vulpes
ENSMOCG00000018743	Stau1	99	76.829	ENSXETG00000001783	stau1	70	77.413	Xenopus_tropicalis
ENSMOCG00000018743	Stau1	55	66.058	ENSXCOG00000008804	stau1	72	68.085	Xiphophorus_couchianus
ENSMOCG00000018743	Stau1	99	69.940	ENSXMAG00000016175	stau1	71	69.940	Xiphophorus_maculatus