EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMOCG00000018780 (Gene tree)
Gene ID
101992966
Gene Symbol
Puf60
Alias
2410104I19Rik|2810454F19Rik
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Microtus_ochrogaster
Status
putative
Strand
Minus strand
Length
10904 bases
Position
chr15:10759607-10770510
Accession
101992966
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMOCP00000021424RRM_1PF00076.228.8e-4412
ENSMOCP00000021424RRM_1PF00076.228.8e-4422
ENSMOCP00000021423RRM_1PF00076.221e-4312
ENSMOCP00000021423RRM_1PF00076.221e-4322
ENSMOCP00000021428RRM_1PF00076.221.1e-4312
ENSMOCP00000021428RRM_1PF00076.221.1e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMOCT00000025260-1680-ENSMOCP00000021428559 (aa)--
ENSMOCT00000025255-1935XM_005354078ENSMOCP00000021423564 (aa)XP_005354135UPI00038BB4B6
ENSMOCT00000025256-1884XM_005354082ENSMOCP00000021424547 (aa)XP_005354139UPI00038C3A37
Gene Model
Click here to download ENSMOCG00000018780's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000018780's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMOCG00000018780Puf605934.314ENSMOCG00000001018-8336.275
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMOCG00000018780Puf6010098.050ENSG00000179950PUF6010099.031Homo_sapiens
ENSMOCG00000018780Puf609485.985ENSAPOG00000001713puf60b9985.985Acanthochromis_polyacanthus
ENSMOCG00000018780Puf609996.223ENSAMEG00000006406PUF609996.223Ailuropoda_melanoleuca
ENSMOCG00000018780Puf609277.543ENSACIG00000003263-9977.969Amphilophus_citrinellus
ENSMOCG00000018780Puf609285.797ENSACIG00000021705puf60b10085.797Amphilophus_citrinellus
ENSMOCG00000018780Puf609385.958ENSAOCG00000005395puf60b10086.756Amphiprion_ocellaris
ENSMOCG00000018780Puf609381.369ENSAOCG00000015558-9981.939Amphiprion_ocellaris
ENSMOCG00000018780Puf609175.397ENSAPEG00000001836-9976.667Amphiprion_percula
ENSMOCG00000018780Puf609383.170ENSAPEG00000011923puf60b9983.170Amphiprion_percula
ENSMOCG00000018780Puf609485.795ENSATEG00000001730puf60b9985.795Anabas_testudineus
ENSMOCG00000018780Puf609381.333ENSATEG00000006303-9981.714Anabas_testudineus
ENSMOCG00000018780Puf609398.084ENSAPLG00000010150PUF6010098.084Anas_platyrhynchos
ENSMOCG00000018780Puf609396.367ENSACAG00000001645PUF609795.825Anolis_carolinensis
ENSMOCG00000018780Puf6010098.759ENSANAG00000018626PUF6010099.031Aotus_nancymaae
ENSMOCG00000018780Puf609285.797ENSACLG00000004462puf60b10085.797Astatotilapia_calliptera
ENSMOCG00000018780Puf609384.112ENSAMXG00000036570puf60a9784.736Astyanax_mexicanus
ENSMOCG00000018780Puf609276.636ENSAMXG00000041030puf60b10074.906Astyanax_mexicanus
ENSMOCG00000018780Puf6010098.759ENSBTAG00000037493PUF6010098.759Bos_taurus
ENSMOCG00000018780Puf607352.650WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSMOCG00000018780Puf6010099.113ENSCJAG00000021485PUF6010099.113Callithrix_jacchus
ENSMOCG00000018780Puf6010098.537ENSCAFG00000001400PUF6010098.537Canis_familiaris
ENSMOCG00000018780Puf6010098.582ENSCAFG00020018754PUF6010098.582Canis_lupus_dingo
ENSMOCG00000018780Puf609998.022ENSCHIG00000001618PUF609298.022Capra_hircus
ENSMOCG00000018780Puf6010098.936ENSTSYG00000011912PUF6010099.419Carlito_syrichta
ENSMOCG00000018780Puf609993.060ENSCPOG00000014613PUF609992.705Cavia_porcellus
ENSMOCG00000018780Puf6010098.759ENSCCAG00000007744PUF6010098.759Cebus_capucinus
ENSMOCG00000018780Puf6010098.050ENSCATG00000035405PUF6010098.050Cercocebus_atys
ENSMOCG00000018780Puf6010099.468ENSCLAG00000009154PUF6010099.468Chinchilla_lanigera
ENSMOCG00000018780Puf609299.031ENSCSAG00000008878PUF6010099.031Chlorocebus_sabaeus
ENSMOCG00000018780Puf609398.084ENSCPBG00000005595PUF609898.084Chrysemys_picta_bellii
ENSMOCG00000018780Puf609348.141ENSCING00000008436-9848.859Ciona_intestinalis
ENSMOCG00000018780Puf605763.043ENSCING00000002156-8763.043Ciona_intestinalis
ENSMOCG00000018780Puf608950.820ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSMOCG00000018780Puf609055.556ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSMOCG00000018780Puf608097.727ENSCANG00000041843PUF6010099.041Colobus_angolensis_palliatus
ENSMOCG00000018780Puf6010099.823ENSCGRG00001017442Puf6010099.823Cricetulus_griseus_chok1gshd
ENSMOCG00000018780Puf609998.741ENSCGRG00000003717Puf609998.741Cricetulus_griseus_crigri
ENSMOCG00000018780Puf609881.982ENSCSEG00000019887puf60b9385.009Cynoglossus_semilaevis
ENSMOCG00000018780Puf609274.805ENSCSEG00000014845-9076.953Cynoglossus_semilaevis
ENSMOCG00000018780Puf608480.000ENSCVAG00000001560-9879.747Cyprinodon_variegatus
ENSMOCG00000018780Puf609284.837ENSCVAG00000009386puf60b10085.988Cyprinodon_variegatus
ENSMOCG00000018780Puf609279.135ENSDARG00000001241puf60b9996.825Danio_rerio
ENSMOCG00000018780Puf609286.742ENSDARG00000032175puf60a9993.617Danio_rerio
ENSMOCG00000018780Puf609981.429ENSDNOG00000043278PUF609881.429Dasypus_novemcinctus
ENSMOCG00000018780Puf609998.741ENSDORG00000004585Puf6010098.741Dipodomys_ordii
ENSMOCG00000018780Puf608951.064FBgn0028577hfp9949.466Drosophila_melanogaster
ENSMOCG00000018780Puf609163.176ENSEBUG00000014291puf60b8466.314Eptatretus_burgeri
ENSMOCG00000018780Puf608972.634ENSEBUG00000005470-8872.222Eptatretus_burgeri
ENSMOCG00000018780Puf6010098.582ENSEASG00005009695PUF6010098.582Equus_asinus_asinus
ENSMOCG00000018780Puf609998.741ENSECAG00000024681PUF609998.741Equus_caballus
ENSMOCG00000018780Puf609683.670ENSELUG00000018443-9985.799Esox_lucius
ENSMOCG00000018780Puf609483.681ENSELUG00000006507puf60b9980.586Esox_lucius
ENSMOCG00000018780Puf6010099.113ENSFCAG00000001045PUF6010099.225Felis_catus
ENSMOCG00000018780Puf609385.441ENSFALG00000001136PUF609886.590Ficedula_albicollis
ENSMOCG00000018780Puf6010099.113ENSFDAG00000017177PUF6010099.113Fukomys_damarensis
ENSMOCG00000018780Puf608879.317ENSFHEG00000021687PUF6010080.164Fundulus_heteroclitus
ENSMOCG00000018780Puf609384.440ENSFHEG00000020046puf60b10086.372Fundulus_heteroclitus
ENSMOCG00000018780Puf609372.180ENSGMOG00000006392puf60b10071.429Gadus_morhua
ENSMOCG00000018780Puf606297.965ENSGALG00000039901PUF609497.965Gallus_gallus
ENSMOCG00000018780Puf609279.344ENSGAFG00000004334-9978.842Gambusia_affinis
ENSMOCG00000018780Puf609383.871ENSGAFG00000021040puf60b10085.797Gambusia_affinis
ENSMOCG00000018780Puf609370.577ENSGACG00000001484-10069.615Gasterosteus_aculeatus
ENSMOCG00000018780Puf609373.724ENSGACG00000004717puf60b9873.055Gasterosteus_aculeatus
ENSMOCG00000018780Puf609398.084ENSGAGG00000013289PUF609298.084Gopherus_agassizii
ENSMOCG00000018780Puf6010098.050ENSGGOG00000004646PUF6010098.050Gorilla_gorilla
ENSMOCG00000018780Puf609381.973ENSHBUG00000009634-10082.937Haplochromis_burtoni
ENSMOCG00000018780Puf609385.009ENSHBUG00000015118puf60b10085.797Haplochromis_burtoni
ENSMOCG00000018780Puf6010099.113ENSHGLG00000006111PUF6010099.113Heterocephalus_glaber_female
ENSMOCG00000018780Puf6010099.113ENSHGLG00100012362PUF6010099.113Heterocephalus_glaber_male
ENSMOCG00000018780Puf609382.505ENSHCOG00000015541puf60b10082.103Hippocampus_comes
ENSMOCG00000018780Puf609166.798ENSHCOG00000000378-9965.226Hippocampus_comes
ENSMOCG00000018780Puf609381.907ENSIPUG00000002453puf60a9982.609Ictalurus_punctatus
ENSMOCG00000018780Puf609278.947ENSIPUG00000004660puf60b9978.719Ictalurus_punctatus
ENSMOCG00000018780Puf6010098.404ENSSTOG00000025037PUF6010098.404Ictidomys_tridecemlineatus
ENSMOCG00000018780Puf6010099.291ENSJJAG00000001076Puf6010099.291Jaculus_jaculus
ENSMOCG00000018780Puf609285.221ENSKMAG00000016745puf60b10086.372Kryptolebias_marmoratus
ENSMOCG00000018780Puf609278.639ENSKMAG00000010106-10076.119Kryptolebias_marmoratus
ENSMOCG00000018780Puf609684.416ENSLBEG00000012505puf60b10084.416Labrus_bergylta
ENSMOCG00000018780Puf606790.710ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSMOCG00000018780Puf609490.875ENSLOCG00000010106puf60b9989.924Lepisosteus_oculatus
ENSMOCG00000018780Puf609996.223ENSLAFG00000022929PUF609996.223Loxodonta_africana
ENSMOCG00000018780Puf6010098.050ENSMFAG00000043373PUF6010098.050Macaca_fascicularis
ENSMOCG00000018780Puf6010098.227ENSMMUG00000013558PUF6010098.227Macaca_mulatta
ENSMOCG00000018780Puf6010098.050ENSMNEG00000031099PUF6010098.050Macaca_nemestrina
ENSMOCG00000018780Puf609299.031ENSMLEG00000040009PUF6010099.031Mandrillus_leucophaeus
ENSMOCG00000018780Puf609382.732ENSMAMG00000019476-9982.353Mastacembelus_armatus
ENSMOCG00000018780Puf609485.338ENSMAMG00000010394puf60b10084.112Mastacembelus_armatus
ENSMOCG00000018780Puf609382.163ENSMZEG00005019425-9982.163Maylandia_zebra
ENSMOCG00000018780Puf609285.797ENSMZEG00005018515puf60b10085.797Maylandia_zebra
ENSMOCG00000018780Puf609398.084ENSMGAG00000013070PUF609898.084Meleagris_gallopavo
ENSMOCG00000018780Puf6072100.000ENSMAUG00000014267-100100.000Mesocricetus_auratus
ENSMOCG00000018780Puf6010075.906ENSMAUG00000018549-10076.130Mesocricetus_auratus
ENSMOCG00000018780Puf6010098.050ENSMICG00000012226PUF609999.234Microcebus_murinus
ENSMOCG00000018780Puf609286.180ENSMMOG00000004217puf60b10086.180Mola_mola
ENSMOCG00000018780Puf609375.394ENSMMOG00000018059-9976.712Mola_mola
ENSMOCG00000018780Puf6010096.709ENSMODG00000009161PUF6010096.709Monodelphis_domestica
ENSMOCG00000018780Puf609380.835ENSMALG00000000200-9979.434Monopterus_albus
ENSMOCG00000018780Puf609478.220ENSMALG00000006797puf60b9978.220Monopterus_albus
ENSMOCG00000018780Puf6010099.468MGP_CAROLIEiJ_G0019910Puf6010099.468Mus_caroli
ENSMOCG00000018780Puf6010099.468ENSMUSG00000002524Puf6010099.468Mus_musculus
ENSMOCG00000018780Puf6010099.468MGP_PahariEiJ_G0019920Puf6010099.468Mus_pahari
ENSMOCG00000018780Puf6010099.468MGP_SPRETEiJ_G0020812Puf6010099.468Mus_spretus
ENSMOCG00000018780Puf609997.842ENSMPUG00000008137PUF609797.842Mustela_putorius_furo
ENSMOCG00000018780Puf609997.842ENSMLUG00000000238-9897.842Myotis_lucifugus
ENSMOCG00000018780Puf609295.446ENSMLUG00000013032-9895.446Myotis_lucifugus
ENSMOCG00000018780Puf6010099.823ENSNGAG00000000712Puf60100100.000Nannospalax_galili
ENSMOCG00000018780Puf609382.634ENSNBRG00000017223-9982.319Neolamprologus_brichardi
ENSMOCG00000018780Puf607584.471ENSNBRG00000013047puf60b9784.471Neolamprologus_brichardi
ENSMOCG00000018780Puf6010098.050ENSNLEG00000002156PUF6010098.050Nomascus_leucogenys
ENSMOCG00000018780Puf606998.976ENSOPRG00000002147PUF607598.976Ochotona_princeps
ENSMOCG00000018780Puf6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSMOCG00000018780Puf609074.359ENSODEG00000015513-9971.992Octodon_degus
ENSMOCG00000018780Puf609482.386ENSONIG00000014030-9982.386Oreochromis_niloticus
ENSMOCG00000018780Puf609485.038ENSONIG00000006247puf60b9985.038Oreochromis_niloticus
ENSMOCG00000018780Puf609178.125ENSOANG00000006962PUF609978.125Ornithorhynchus_anatinus
ENSMOCG00000018780Puf609278.977ENSORLG00000028655-9979.087Oryzias_latipes
ENSMOCG00000018780Puf609385.009ENSORLG00000012279puf60b10085.221Oryzias_latipes
ENSMOCG00000018780Puf609378.868ENSORLG00020018144-9878.977Oryzias_latipes_hni
ENSMOCG00000018780Puf609385.009ENSORLG00020007333puf6010085.221Oryzias_latipes_hni
ENSMOCG00000018780Puf609384.121ENSORLG00015007718puf60b10085.086Oryzias_latipes_hsok
ENSMOCG00000018780Puf609379.127ENSORLG00015016833-9879.238Oryzias_latipes_hsok
ENSMOCG00000018780Puf609382.528ENSOMEG00000001643puf60b10082.341Oryzias_melastigma
ENSMOCG00000018780Puf609379.924ENSOMEG00000022185-9879.886Oryzias_melastigma
ENSMOCG00000018780Puf609998.561ENSOGAG00000006259PUF609998.561Otolemur_garnettii
ENSMOCG00000018780Puf609496.558ENSOARG00000016235PUF609996.558Ovis_aries
ENSMOCG00000018780Puf6010098.050ENSPPAG00000029933PUF6010098.050Pan_paniscus
ENSMOCG00000018780Puf6010099.113ENSPPRG00000003257PUF6010099.225Panthera_pardus
ENSMOCG00000018780Puf609997.593ENSPTIG00000009795PUF609996.743Panthera_tigris_altaica
ENSMOCG00000018780Puf609997.842ENSPTRG00000043963-9997.842Pan_troglodytes
ENSMOCG00000018780Puf6010097.872ENSPTRG00000020670PUF6010097.872Pan_troglodytes
ENSMOCG00000018780Puf6010098.050ENSPANG00000021936PUF6010098.050Papio_anubis
ENSMOCG00000018780Puf609883.179ENSPKIG00000004295puf60a9992.353Paramormyrops_kingsleyae
ENSMOCG00000018780Puf609387.452ENSPKIG00000012204puf60b10088.269Paramormyrops_kingsleyae
ENSMOCG00000018780Puf609497.897ENSPSIG00000004679PUF609997.897Pelodiscus_sinensis
ENSMOCG00000018780Puf609284.733ENSPMGG00000013444puf60b9984.733Periophthalmus_magnuspinnatus
ENSMOCG00000018780Puf60100100.000ENSPEMG00000008820Puf60100100.000Peromyscus_maniculatus_bairdii
ENSMOCG00000018780Puf609995.135ENSPCIG00000020270PUF609999.424Phascolarctos_cinereus
ENSMOCG00000018780Puf609384.440ENSPFOG00000019217puf60b10085.019Poecilia_formosa
ENSMOCG00000018780Puf609380.000ENSPFOG00000011118-9980.344Poecilia_formosa
ENSMOCG00000018780Puf609285.221ENSPLAG00000010754puf60b10086.372Poecilia_latipinna
ENSMOCG00000018780Puf609977.658ENSPLAG00000017025-9179.962Poecilia_latipinna
ENSMOCG00000018780Puf609977.658ENSPMEG00000009767-9180.344Poecilia_mexicana
ENSMOCG00000018780Puf609384.440ENSPMEG00000000838puf60b10086.372Poecilia_mexicana
ENSMOCG00000018780Puf609381.701ENSPREG00000005440puf60b10084.127Poecilia_reticulata
ENSMOCG00000018780Puf607597.362ENSPPYG00000018951-9597.362Pongo_abelii
ENSMOCG00000018780Puf607599.281ENSPCAG00000014837PUF6010099.281Procavia_capensis
ENSMOCG00000018780Puf6010098.582ENSPCOG00000027981PUF6010098.582Propithecus_coquereli
ENSMOCG00000018780Puf609299.617ENSPVAG00000016167PUF608199.617Pteropus_vampyrus
ENSMOCG00000018780Puf609285.797ENSPNYG00000002556puf60b10085.797Pundamilia_nyererei
ENSMOCG00000018780Puf609382.163ENSPNYG00000004273-9982.163Pundamilia_nyererei
ENSMOCG00000018780Puf609284.961ENSPNAG00000019909puf60a9984.766Pygocentrus_nattereri
ENSMOCG00000018780Puf609976.460ENSPNAG00000019415puf60b9077.668Pygocentrus_nattereri
ENSMOCG00000018780Puf6010099.452ENSRNOG00000009960Puf6010099.452Rattus_norvegicus
ENSMOCG00000018780Puf6010098.050ENSRBIG00000035274PUF6010098.050Rhinopithecus_bieti
ENSMOCG00000018780Puf6010098.050ENSRROG00000029360PUF6010098.050Rhinopithecus_roxellana
ENSMOCG00000018780Puf609994.203ENSSBOG00000027089PUF609897.701Saimiri_boliviensis_boliviensis
ENSMOCG00000018780Puf609195.703ENSSHAG00000006668PUF609695.703Sarcophilus_harrisii
ENSMOCG00000018780Puf609282.510ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSMOCG00000018780Puf608887.525ENSSFOG00015019371puf60a9887.525Scleropages_formosus
ENSMOCG00000018780Puf606892.933ENSSMAG00000016381puf60b7392.933Scophthalmus_maximus
ENSMOCG00000018780Puf609380.344ENSSDUG00000007048-9880.725Seriola_dumerili
ENSMOCG00000018780Puf609383.829ENSSDUG00000009935puf60b9984.646Seriola_dumerili
ENSMOCG00000018780Puf609386.260ENSSLDG00000024011puf60b10084.299Seriola_lalandi_dorsalis
ENSMOCG00000018780Puf609280.645ENSSLDG00000007366-9981.025Seriola_lalandi_dorsalis
ENSMOCG00000018780Puf606185.841ENSSPUG00000013518PUF609485.163Sphenodon_punctatus
ENSMOCG00000018780Puf609282.252ENSSPAG00000020285-10082.824Stegastes_partitus
ENSMOCG00000018780Puf609383.179ENSSPAG00000012144puf60b10084.486Stegastes_partitus
ENSMOCG00000018780Puf609997.670ENSSSCG00000038800PUF609898.614Sus_scrofa
ENSMOCG00000018780Puf609394.828ENSTGUG00000012797-10094.828Taeniopygia_guttata
ENSMOCG00000018780Puf609484.470ENSTRUG00000005420puf60b10082.991Takifugu_rubripes
ENSMOCG00000018780Puf609180.160ENSTRUG00000008843-10080.561Takifugu_rubripes
ENSMOCG00000018780Puf609484.470ENSTNIG00000013675puf60b10084.280Tetraodon_nigroviridis
ENSMOCG00000018780Puf609478.203ENSTNIG00000003069-10078.203Tetraodon_nigroviridis
ENSMOCG00000018780Puf605796.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSMOCG00000018780Puf607181.503ENSTBEG00000001899-10081.792Tupaia_belangeri
ENSMOCG00000018780Puf609298.643ENSTTRG00000017088PUF6010098.643Tursiops_truncatus
ENSMOCG00000018780Puf6010098.227ENSUAMG00000024917PUF6010098.227Ursus_americanus
ENSMOCG00000018780Puf609594.140ENSUMAG00000000272PUF609992.986Ursus_maritimus
ENSMOCG00000018780Puf609998.205ENSVVUG00000022527PUF6010099.419Vulpes_vulpes
ENSMOCG00000018780Puf609494.275ENSXETG00000012469puf609994.831Xenopus_tropicalis
ENSMOCG00000018780Puf609184.722ENSXCOG00000012355puf60b10085.913Xiphophorus_couchianus
ENSMOCG00000018780Puf609380.315ENSXMAG00000010507-9979.528Xiphophorus_maculatus
ENSMOCG00000018780Puf609384.440ENSXMAG00000001862puf60b10086.372Xiphophorus_maculatus

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