EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSMOCG00000018960 (Gene tree)
Gene ID
101988830
Gene Symbol
Csde1
Alias
D3Jfr1|unr
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Microtus_ochrogaster
Status
putative
Strand
Plus strand
Length
20795 bases
Position
chr21:10781500-10802294
Accession
101988830
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMOCP00000021690CSDPF00313.221.1e-8515
ENSMOCP00000021690CSDPF00313.221.1e-8525
ENSMOCP00000021690CSDPF00313.221.1e-8535
ENSMOCP00000021690CSDPF00313.221.1e-8545
ENSMOCP00000021690CSDPF00313.221.1e-8555
ENSMOCP00000021687CSDPF00313.221.7e-8515
ENSMOCP00000021687CSDPF00313.221.7e-8525
ENSMOCP00000021687CSDPF00313.221.7e-8535
ENSMOCP00000021687CSDPF00313.221.7e-8545
ENSMOCP00000021687CSDPF00313.221.7e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMOCT00000025528-3523XM_005357130ENSMOCP00000021690767 (aa)XP_005357187UPI00038C5B62
ENSMOCT00000025525-3616XM_005357128ENSMOCP00000021687798 (aa)XP_005357185UPI00038C0B9D
Gene Model
Click here to download ENSMOCG00000018960's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000018960's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMOCG00000018960Csde110098.622ENSG00000009307CSDE1100100.000Homo_sapiens
ENSMOCG00000018960Csde110077.013ENSAPOG00000015538csde110077.013Acanthochromis_polyacanthus
ENSMOCG00000018960Csde110097.523ENSAMEG00000017129CSDE19497.523Ailuropoda_melanoleuca
ENSMOCG00000018960Csde19176.757ENSACIG00000015175csde110076.757Amphilophus_citrinellus
ENSMOCG00000018960Csde110077.143ENSAOCG00000011510csde110077.143Amphiprion_ocellaris
ENSMOCG00000018960Csde110077.143ENSAPEG00000007194csde110077.143Amphiprion_percula
ENSMOCG00000018960Csde110076.753ENSATEG00000003864csde110076.753Anabas_testudineus
ENSMOCG00000018960Csde110091.134ENSAPLG00000008797CSDE110091.134Anas_platyrhynchos
ENSMOCG00000018960Csde110091.604ENSACAG00000003120CSDE110091.604Anolis_carolinensis
ENSMOCG00000018960Csde110098.305ENSANAG00000024665CSDE19598.305Aotus_nancymaae
ENSMOCG00000018960Csde19373.050ENSANAG00000028396-9173.810Aotus_nancymaae
ENSMOCG00000018960Csde110076.723ENSACLG00000013296csde110076.723Astatotilapia_calliptera
ENSMOCG00000018960Csde110076.394ENSAMXG00000007436csde110076.394Astyanax_mexicanus
ENSMOCG00000018960Csde110098.120ENSBTAG00000000678CSDE110098.044Bos_taurus
ENSMOCG00000018960Csde110098.371ENSCJAG00000012565CSDE19598.371Callithrix_jacchus
ENSMOCG00000018960Csde19898.537ENSCAFG00000009618CSDE19498.537Canis_familiaris
ENSMOCG00000018960Csde110098.435ENSCAFG00020000481CSDE110098.435Canis_lupus_dingo
ENSMOCG00000018960Csde110098.120ENSCHIG00000017250CSDE110098.044Capra_hircus
ENSMOCG00000018960Csde110098.246ENSTSYG00000003747CSDE110098.246Carlito_syrichta
ENSMOCG00000018960Csde110092.398ENSCAPG00000015128CSDE110092.398Cavia_aperea
ENSMOCG00000018960Csde110093.484ENSCPOG00000040388CSDE110093.484Cavia_porcellus
ENSMOCG00000018960Csde110098.371ENSCCAG00000036794CSDE110098.371Cebus_capucinus
ENSMOCG00000018960Csde19773.497ENSCCAG00000030878-9173.497Cebus_capucinus
ENSMOCG00000018960Csde19576.238ENSCCAG00000033677-9976.010Cebus_capucinus
ENSMOCG00000018960Csde110098.622ENSCATG00000036962CSDE19898.575Cercocebus_atys
ENSMOCG00000018960Csde110098.622ENSCLAG00000006618CSDE110098.622Chinchilla_lanigera
ENSMOCG00000018960Csde110098.622ENSCSAG00000001658CSDE19598.622Chlorocebus_sabaeus
ENSMOCG00000018960Csde110099.387ENSCHOG00000000918CSDE18599.387Choloepus_hoffmanni
ENSMOCG00000018960Csde110091.855ENSCPBG00000016547CSDE110091.855Chrysemys_picta_bellii
ENSMOCG00000018960Csde19742.543ENSCING00000014465-9642.543Ciona_intestinalis
ENSMOCG00000018960Csde19642.007ENSCSAVG00000008100-9842.007Ciona_savignyi
ENSMOCG00000018960Csde110098.622ENSCANG00000035096CSDE19898.575Colobus_angolensis_palliatus
ENSMOCG00000018960Csde19993.053ENSCANG00000031069-10093.053Colobus_angolensis_palliatus
ENSMOCG00000018960Csde110099.749ENSCGRG00001016833-10099.749Cricetulus_griseus_chok1gshd
ENSMOCG00000018960Csde110082.529ENSCGRG00001014011-10082.529Cricetulus_griseus_chok1gshd
ENSMOCG00000018960Csde110086.522ENSCGRG00000005831-10086.522Cricetulus_griseus_crigri
ENSMOCG00000018960Csde19799.555ENSCGRG00000002225-10099.555Cricetulus_griseus_crigri
ENSMOCG00000018960Csde110076.593ENSCSEG00000002620csde110076.593Cynoglossus_semilaevis
ENSMOCG00000018960Csde110076.104ENSCVAG00000001344csde110076.104Cyprinodon_variegatus
ENSMOCG00000018960Csde110077.278ENSDARG00000074758csde110077.278Danio_rerio
ENSMOCG00000018960Csde110098.177ENSDNOG00000010287-9398.177Dasypus_novemcinctus
ENSMOCG00000018960Csde18069.582ENSDNOG00000034464-10071.304Dasypus_novemcinctus
ENSMOCG00000018960Csde110098.496ENSDORG00000011609Csde110098.496Dipodomys_ordii
ENSMOCG00000018960Csde19748.156FBgn0263352Unr8148.795Drosophila_melanogaster
ENSMOCG00000018960Csde19086.709ENSETEG00000006280-10086.709Echinops_telfairi
ENSMOCG00000018960Csde19976.371ENSETEG00000013678-9976.371Echinops_telfairi
ENSMOCG00000018960Csde19398.347ENSETEG00000002491-7498.347Echinops_telfairi
ENSMOCG00000018960Csde17968.212ENSETEG00000007109-9968.212Echinops_telfairi
ENSMOCG00000018960Csde19955.774ENSEBUG00000008647csde19954.048Eptatretus_burgeri
ENSMOCG00000018960Csde110098.496ENSEASG00005006284CSDE110098.496Equus_asinus_asinus
ENSMOCG00000018960Csde110098.496ENSECAG00000020885CSDE110098.496Equus_caballus
ENSMOCG00000018960Csde19297.906ENSEEUG00000006286CSDE16897.906Erinaceus_europaeus
ENSMOCG00000018960Csde110075.162ENSELUG00000015507csde110075.162Esox_lucius
ENSMOCG00000018960Csde110098.747ENSFCAG00000029266CSDE110098.696Felis_catus
ENSMOCG00000018960Csde110091.479ENSFALG00000003407CSDE110091.479Ficedula_albicollis
ENSMOCG00000018960Csde110098.622ENSFDAG00000007882CSDE110098.622Fukomys_damarensis
ENSMOCG00000018960Csde110076.155ENSFHEG00000010799csde110076.155Fundulus_heteroclitus
ENSMOCG00000018960Csde19976.471ENSGMOG00000012731csde110076.471Gadus_morhua
ENSMOCG00000018960Csde19891.560ENSGALG00000002139CSDE19891.560Gallus_gallus
ENSMOCG00000018960Csde19275.762ENSGAFG00000005241csde19575.762Gambusia_affinis
ENSMOCG00000018960Csde19976.875ENSGACG00000004544csde110076.875Gasterosteus_aculeatus
ENSMOCG00000018960Csde110091.479ENSGAGG00000017685CSDE110091.479Gopherus_agassizii
ENSMOCG00000018960Csde110098.622ENSGGOG00000002164CSDE110098.566Gorilla_gorilla
ENSMOCG00000018960Csde110076.723ENSHBUG00000020315csde110076.723Haplochromis_burtoni
ENSMOCG00000018960Csde110089.179ENSHGLG00000003829-10089.179Heterocephalus_glaber_female
ENSMOCG00000018960Csde110089.223ENSHGLG00000009620-10089.474Heterocephalus_glaber_female
ENSMOCG00000018960Csde19980.176ENSHGLG00000000650-9980.176Heterocephalus_glaber_female
ENSMOCG00000018960Csde110082.581ENSHGLG00000019549-10082.581Heterocephalus_glaber_female
ENSMOCG00000018960Csde19989.532ENSHGLG00000010039-10089.532Heterocephalus_glaber_female
ENSMOCG00000018960Csde19985.395ENSHGLG00000007471-9885.395Heterocephalus_glaber_female
ENSMOCG00000018960Csde19989.222ENSHGLG00000008555-10089.222Heterocephalus_glaber_female
ENSMOCG00000018960Csde19384.100ENSHGLG00100004195-10084.100Heterocephalus_glaber_male
ENSMOCG00000018960Csde110084.355ENSHGLG00100012072-10084.355Heterocephalus_glaber_male
ENSMOCG00000018960Csde19982.895ENSHGLG00100007287-9882.895Heterocephalus_glaber_male
ENSMOCG00000018960Csde19982.183ENSHGLG00100004833-10082.183Heterocephalus_glaber_male
ENSMOCG00000018960Csde110098.872ENSHGLG00100019438-10098.872Heterocephalus_glaber_male
ENSMOCG00000018960Csde110080.469ENSHGLG00100001846-10080.469Heterocephalus_glaber_male
ENSMOCG00000018960Csde19989.310ENSHGLG00100006910-10089.310Heterocephalus_glaber_male
ENSMOCG00000018960Csde19984.481ENSHGLG00100002245-9984.481Heterocephalus_glaber_male
ENSMOCG00000018960Csde110075.813ENSHCOG00000004158csde110075.813Hippocampus_comes
ENSMOCG00000018960Csde110076.135ENSIPUG00000000355csde110076.135Ictalurus_punctatus
ENSMOCG00000018960Csde110080.818ENSSTOG00000030994-10080.818Ictidomys_tridecemlineatus
ENSMOCG00000018960Csde18682.863ENSSTOG00000032722-9882.863Ictidomys_tridecemlineatus
ENSMOCG00000018960Csde110098.997ENSJJAG00000019571Csde110098.997Jaculus_jaculus
ENSMOCG00000018960Csde110076.025ENSKMAG00000005685csde110075.773Kryptolebias_marmoratus
ENSMOCG00000018960Csde110077.013ENSLBEG00000014770csde110077.013Labrus_bergylta
ENSMOCG00000018960Csde110079.404ENSLACG00000018452CSDE19479.404Latimeria_chalumnae
ENSMOCG00000018960Csde110079.474ENSLOCG00000010413csde19479.474Lepisosteus_oculatus
ENSMOCG00000018960Csde110097.001ENSLAFG00000007150CSDE19697.001Loxodonta_africana
ENSMOCG00000018960Csde110098.622ENSMFAG00000003674CSDE110098.566Macaca_fascicularis
ENSMOCG00000018960Csde110098.622ENSMMUG00000001974CSDE110098.566Macaca_mulatta
ENSMOCG00000018960Csde110098.622ENSMNEG00000045247CSDE19898.575Macaca_nemestrina
ENSMOCG00000018960Csde110098.371ENSMLEG00000038673CSDE19598.371Mandrillus_leucophaeus
ENSMOCG00000018960Csde110077.662ENSMAMG00000008821csde110077.662Mastacembelus_armatus
ENSMOCG00000018960Csde110076.723ENSMZEG00005021675csde110076.723Maylandia_zebra
ENSMOCG00000018960Csde110090.885ENSMGAG00000016381CSDE110090.885Meleagris_gallopavo
ENSMOCG00000018960Csde110099.749ENSMAUG00000014031Csde110099.749Mesocricetus_auratus
ENSMOCG00000018960Csde110097.914ENSMICG00000002050CSDE19998.214Microcebus_murinus
ENSMOCG00000018960Csde110077.273ENSMMOG00000015075csde110077.273Mola_mola
ENSMOCG00000018960Csde110095.363ENSMODG00000004685CSDE110095.363Monodelphis_domestica
ENSMOCG00000018960Csde110077.143ENSMALG00000007132csde110077.143Monopterus_albus
ENSMOCG00000018960Csde110099.499MGP_CAROLIEiJ_G0025444Csde110099.499Mus_caroli
ENSMOCG00000018960Csde110099.624ENSMUSG00000068823Csde110099.624Mus_musculus
ENSMOCG00000018960Csde110099.875MGP_PahariEiJ_G0026888Csde110099.875Mus_pahari
ENSMOCG00000018960Csde110099.875MGP_SPRETEiJ_G0026394Csde110099.875Mus_spretus
ENSMOCG00000018960Csde19898.851ENSMPUG00000005753CSDE19998.851Mustela_putorius_furo
ENSMOCG00000018960Csde110097.653ENSMLUG00000005681CSDE19497.653Myotis_lucifugus
ENSMOCG00000018960Csde19771.269ENSNGAG00000012599-10071.269Nannospalax_galili
ENSMOCG00000018960Csde110099.373ENSNGAG00000021929Csde110099.373Nannospalax_galili
ENSMOCG00000018960Csde110076.723ENSNBRG00000020808csde110076.723Neolamprologus_brichardi
ENSMOCG00000018960Csde110098.496ENSNLEG00000004842CSDE19798.435Nomascus_leucogenys
ENSMOCG00000018960Csde19896.117ENSMEUG00000002677CSDE19696.117Notamacropus_eugenii
ENSMOCG00000018960Csde19897.087ENSOPRG00000005002CSDE18294.048Ochotona_princeps
ENSMOCG00000018960Csde110098.246ENSODEG00000007383-10098.246Octodon_degus
ENSMOCG00000018960Csde19767.699ENSODEG00000005979-9867.699Octodon_degus
ENSMOCG00000018960Csde110074.603ENSONIG00000009309csde110074.603Oreochromis_niloticus
ENSMOCG00000018960Csde110079.426ENSOANG00000003346-10079.426Ornithorhynchus_anatinus
ENSMOCG00000018960Csde110097.870ENSOCUG00000016438CSDE19597.870Oryctolagus_cuniculus
ENSMOCG00000018960Csde110076.983ENSORLG00000000707csde110076.983Oryzias_latipes
ENSMOCG00000018960Csde110076.500ENSORLG00020005148csde110074.725Oryzias_latipes_hni
ENSMOCG00000018960Csde110076.983ENSORLG00015019415csde110076.983Oryzias_latipes_hsok
ENSMOCG00000018960Csde110077.532ENSOMEG00000015656csde110077.532Oryzias_melastigma
ENSMOCG00000018960Csde110098.696ENSOGAG00000012127CSDE19498.696Otolemur_garnettii
ENSMOCG00000018960Csde110098.175ENSOARG00000020034CSDE19498.175Ovis_aries
ENSMOCG00000018960Csde110098.622ENSPPAG00000025861CSDE110098.566Pan_paniscus
ENSMOCG00000018960Csde110098.747ENSPPRG00000006747CSDE19598.747Panthera_pardus
ENSMOCG00000018960Csde110098.747ENSPTIG00000015468CSDE110098.747Panthera_tigris_altaica
ENSMOCG00000018960Csde110098.622ENSPTRG00000033721CSDE110098.622Pan_troglodytes
ENSMOCG00000018960Csde110098.622ENSPANG00000018873CSDE110098.566Papio_anubis
ENSMOCG00000018960Csde110076.853ENSPKIG00000009459csde110076.853Paramormyrops_kingsleyae
ENSMOCG00000018960Csde19694.912ENSPSIG00000003823CSDE19694.912Pelodiscus_sinensis
ENSMOCG00000018960Csde110077.013ENSPMGG00000000772csde110077.013Periophthalmus_magnuspinnatus
ENSMOCG00000018960Csde110099.749ENSPEMG00000020357-10099.749Peromyscus_maniculatus_bairdii
ENSMOCG00000018960Csde110095.489ENSPCIG00000022587CSDE110095.489Phascolarctos_cinereus
ENSMOCG00000018960Csde19974.845ENSPFOG00000012664csde110075.466Poecilia_formosa
ENSMOCG00000018960Csde19770.814ENSPLAG00000017680csde19370.814Poecilia_latipinna
ENSMOCG00000018960Csde19870.713ENSPMEG00000005094csde19670.713Poecilia_mexicana
ENSMOCG00000018960Csde110075.498ENSPREG00000011631csde110073.469Poecilia_reticulata
ENSMOCG00000018960Csde110098.496ENSPPYG00000000996CSDE110098.496Pongo_abelii
ENSMOCG00000018960Csde110098.098ENSPCAG00000014368CSDE19098.098Procavia_capensis
ENSMOCG00000018960Csde19084.328ENSPCOG00000008223-9282.847Propithecus_coquereli
ENSMOCG00000018960Csde110098.566ENSPCOG00000017893CSDE110098.566Propithecus_coquereli
ENSMOCG00000018960Csde110092.438ENSPVAG00000008225CSDE19592.438Pteropus_vampyrus
ENSMOCG00000018960Csde110076.723ENSPNYG00000013745csde110076.723Pundamilia_nyererei
ENSMOCG00000018960Csde110077.013ENSPNAG00000001958csde110077.013Pygocentrus_nattereri
ENSMOCG00000018960Csde110099.749ENSRNOG00000061058Csde110099.749Rattus_norvegicus
ENSMOCG00000018960Csde110092.848ENSRBIG00000038966-9492.848Rhinopithecus_bieti
ENSMOCG00000018960Csde110094.922ENSRBIG00000038088-9997.005Rhinopithecus_bieti
ENSMOCG00000018960Csde110098.622ENSRROG00000043101CSDE19898.341Rhinopithecus_roxellana
ENSMOCG00000018960Csde110098.371ENSSBOG00000035592CSDE19598.371Saimiri_boliviensis_boliviensis
ENSMOCG00000018960Csde110095.176ENSSHAG00000009831CSDE110095.176Sarcophilus_harrisii
ENSMOCG00000018960Csde110076.723ENSSFOG00015007498csde110076.723Scleropages_formosus
ENSMOCG00000018960Csde110077.662ENSSMAG00000007203csde110077.662Scophthalmus_maximus
ENSMOCG00000018960Csde110077.143ENSSDUG00000015380csde110077.143Seriola_dumerili
ENSMOCG00000018960Csde110077.143ENSSLDG00000008819csde110077.143Seriola_lalandi_dorsalis
ENSMOCG00000018960Csde110097.523ENSSARG00000000738CSDE19497.523Sorex_araneus
ENSMOCG00000018960Csde110091.228ENSSPUG00000008714CSDE110091.228Sphenodon_punctatus
ENSMOCG00000018960Csde110077.013ENSSPAG00000000716csde110077.013Stegastes_partitus
ENSMOCG00000018960Csde110098.496ENSSSCG00000006752CSDE110098.435Sus_scrofa
ENSMOCG00000018960Csde110090.500ENSTGUG00000000972CSDE110090.500Taeniopygia_guttata
ENSMOCG00000018960Csde110074.122ENSTRUG00000007996csde110074.122Takifugu_rubripes
ENSMOCG00000018960Csde19380.608ENSTNIG00000010878csde110080.608Tetraodon_nigroviridis
ENSMOCG00000018960Csde19398.718ENSTBEG00000011880-6298.773Tupaia_belangeri
ENSMOCG00000018960Csde110097.653ENSTTRG00000015583CSDE19497.653Tursiops_truncatus
ENSMOCG00000018960Csde18999.349ENSUAMG00000021779-10098.714Ursus_americanus
ENSMOCG00000018960Csde18993.881ENSUAMG00000024289-9993.881Ursus_americanus
ENSMOCG00000018960Csde110090.874ENSUMAG00000009720-9790.874Ursus_maritimus
ENSMOCG00000018960Csde19798.575ENSUMAG00000011714-9998.575Ursus_maritimus
ENSMOCG00000018960Csde110097.664ENSVPAG00000000749CSDE17997.664Vicugna_pacos
ENSMOCG00000018960Csde19098.392ENSVVUG00000009890CSDE19498.392Vulpes_vulpes
ENSMOCG00000018960Csde110085.144ENSXETG00000021448csde110085.144Xenopus_tropicalis
ENSMOCG00000018960Csde19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSMOCG00000018960Csde110076.750ENSXMAG00000009080csde19877.188Xiphophorus_maculatus

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