EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000019519 (Gene tree)
Gene ID: 101989951
Gene Symbol: -
Alias: -
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 35101 bases
Position: chr8:56593264-56628364
Accession: 101989951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000022512	CPL	PF08144.11	1.3e-52	1	1
ENSMOCP00000022514	CPL	PF08144.11	4e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000026357	-	2158	XM_005352102	ENSMOCP00000022512	648 (aa)	XP_005352159	UPI00038C29D7
ENSMOCT00000026359	-	1938	-	ENSMOCP00000022514	645 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000019519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000019519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000019519	-	99	93.972	ENSMOCG00000014830	-	100	93.509

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000019519	-	99	90.895	ENSG00000080608	PUM3	100	90.895	Homo_sapiens
ENSMOCG00000019519	-	96	55.072	ENSAPOG00000020252	pum3	95	53.906	Acanthochromis_polyacanthus
ENSMOCG00000019519	-	99	89.954	ENSAMEG00000012187	PUM3	100	89.954	Ailuropoda_melanoleuca
ENSMOCG00000019519	-	86	55.793	ENSACIG00000009786	pum3	88	56.900	Amphilophus_citrinellus
ENSMOCG00000019519	-	96	55.878	ENSAOCG00000004439	pum3	99	54.518	Amphiprion_ocellaris
ENSMOCG00000019519	-	99	53.433	ENSAPEG00000020523	pum3	99	54.518	Amphiprion_percula
ENSMOCG00000019519	-	82	62.056	ENSATEG00000005799	pum3	98	55.887	Anabas_testudineus
ENSMOCG00000019519	-	96	72.669	ENSAPLG00000002920	PUM3	100	72.669	Anas_platyrhynchos
ENSMOCG00000019519	-	93	67.769	ENSACAG00000003174	PUM3	99	69.767	Anolis_carolinensis
ENSMOCG00000019519	-	99	91.345	ENSANAG00000024520	PUM3	100	91.345	Aotus_nancymaae
ENSMOCG00000019519	-	99	55.093	ENSACLG00000001017	pum3	97	54.784	Astatotilapia_calliptera
ENSMOCG00000019519	-	92	63.548	ENSAMXG00000020911	pum3	98	63.548	Astyanax_mexicanus
ENSMOCG00000019519	-	99	89.026	ENSBTAG00000013357	PUM3	100	89.026	Bos_taurus
ENSMOCG00000019519	-	75	32.193	WBGene00014165	puf-12	64	32.193	Caenorhabditis_elegans
ENSMOCG00000019519	-	99	90.417	ENSCJAG00000010917	PUM3	100	90.417	Callithrix_jacchus
ENSMOCG00000019519	-	100	89.198	ENSCAFG00000002035	PUM3	100	89.198	Canis_familiaris
ENSMOCG00000019519	-	100	89.043	ENSCAFG00020026867	PUM3	100	89.043	Canis_lupus_dingo
ENSMOCG00000019519	-	99	88.717	ENSCHIG00000021559	PUM3	100	88.717	Capra_hircus
ENSMOCG00000019519	-	99	89.181	ENSTSYG00000007481	PUM3	100	89.181	Carlito_syrichta
ENSMOCG00000019519	-	100	85.824	ENSCAPG00000010592	-	100	85.824	Cavia_aperea
ENSMOCG00000019519	-	100	87.809	ENSCPOG00000008552	-	100	87.809	Cavia_porcellus
ENSMOCG00000019519	-	99	90.881	ENSCCAG00000032650	PUM3	100	90.881	Cebus_capucinus
ENSMOCG00000019519	-	99	91.331	ENSCATG00000024880	PUM3	100	91.190	Cercocebus_atys
ENSMOCG00000019519	-	100	89.506	ENSCLAG00000011892	PUM3	100	89.506	Chinchilla_lanigera
ENSMOCG00000019519	-	99	91.345	ENSCSAG00000008691	PUM3	100	91.345	Chlorocebus_sabaeus
ENSMOCG00000019519	-	100	68.827	ENSCHOG00000002535	PUM3	95	68.827	Choloepus_hoffmanni
ENSMOCG00000019519	-	99	72.334	ENSCPBG00000025470	PUM3	95	72.334	Chrysemys_picta_bellii
ENSMOCG00000019519	-	81	41.133	ENSCING00000024199	-	87	41.752	Ciona_intestinalis
ENSMOCG00000019519	-	89	37.856	ENSCSAVG00000006072	-	99	40.952	Ciona_savignyi
ENSMOCG00000019519	-	99	91.345	ENSCANG00000006142	PUM3	100	91.345	Colobus_angolensis_palliatus
ENSMOCG00000019519	-	100	96.296	ENSCGRG00001016402	Pum3	100	96.296	Cricetulus_griseus_chok1gshd
ENSMOCG00000019519	-	100	96.296	ENSCGRG00000010207	Pum3	100	96.296	Cricetulus_griseus_crigri
ENSMOCG00000019519	-	78	60.465	ENSCSEG00000001565	pum3	99	56.410	Cynoglossus_semilaevis
ENSMOCG00000019519	-	62	51.852	ENSCVAG00000006550	pum3	94	57.674	Cyprinodon_variegatus
ENSMOCG00000019519	-	94	66.561	ENSDARG00000087779	pum3	99	65.764	Danio_rerio
ENSMOCG00000019519	-	100	76.344	ENSDNOG00000008157	PUM3	70	76.733	Dasypus_novemcinctus
ENSMOCG00000019519	-	81	83.871	ENSETEG00000015331	PUM3	81	83.871	Echinops_telfairi
ENSMOCG00000019519	-	80	41.243	ENSEBUG00000011586	pum3	76	41.992	Eptatretus_burgeri
ENSMOCG00000019519	-	99	91.486	ENSEASG00005010350	PUM3	100	91.345	Equus_asinus_asinus
ENSMOCG00000019519	-	99	91.641	ENSECAG00000017193	PUM3	100	91.499	Equus_caballus
ENSMOCG00000019519	-	93	80.597	ENSEEUG00000010314	PUM3	100	80.597	Erinaceus_europaeus
ENSMOCG00000019519	-	97	61.611	ENSELUG00000002215	pum3	98	61.478	Esox_lucius
ENSMOCG00000019519	-	99	71.472	ENSFALG00000010509	PUM3	100	71.472	Ficedula_albicollis
ENSMOCG00000019519	-	100	89.198	ENSFDAG00000021027	PUM3	100	89.198	Fukomys_damarensis
ENSMOCG00000019519	-	95	59.424	ENSFHEG00000015576	pum3	99	59.424	Fundulus_heteroclitus
ENSMOCG00000019519	-	83	60.634	ENSGMOG00000014217	pum3	97	60.612	Gadus_morhua
ENSMOCG00000019519	-	99	69.892	ENSGALG00000010178	PUM3	100	70.046	Gallus_gallus
ENSMOCG00000019519	-	55	61.602	ENSGAFG00000001930	pum3	62	61.602	Gambusia_affinis
ENSMOCG00000019519	-	82	59.774	ENSGACG00000017878	pum3	96	59.886	Gasterosteus_aculeatus
ENSMOCG00000019519	-	99	72.025	ENSGAGG00000018983	PUM3	99	72.887	Gopherus_agassizii
ENSMOCG00000019519	-	99	91.345	ENSGGOG00000006143	PUM3	100	91.345	Gorilla_gorilla
ENSMOCG00000019519	-	99	49.691	ENSHBUG00000012903	pum3	99	48.392	Haplochromis_burtoni
ENSMOCG00000019519	-	100	89.352	ENSHGLG00000015868	-	100	89.352	Heterocephalus_glaber_female
ENSMOCG00000019519	-	100	89.352	ENSHGLG00100018825	PUM3	100	89.490	Heterocephalus_glaber_male
ENSMOCG00000019519	-	92	57.774	ENSHCOG00000010306	pum3	99	54.925	Hippocampus_comes
ENSMOCG00000019519	-	87	67.250	ENSIPUG00000024801	pum3	98	64.830	Ictalurus_punctatus
ENSMOCG00000019519	-	100	91.821	ENSSTOG00000009586	PUM3	100	91.821	Ictidomys_tridecemlineatus
ENSMOCG00000019519	-	99	89.181	ENSJJAG00000012563	Pum3	99	89.181	Jaculus_jaculus
ENSMOCG00000019519	-	95	55.788	ENSKMAG00000010277	pum3	99	54.932	Kryptolebias_marmoratus
ENSMOCG00000019519	-	96	56.109	ENSLBEG00000012213	pum3	99	54.111	Labrus_bergylta
ENSMOCG00000019519	-	100	66.412	ENSLACG00000008312	PUM3	100	66.412	Latimeria_chalumnae
ENSMOCG00000019519	-	96	65.605	ENSLOCG00000012529	pum3	99	65.605	Lepisosteus_oculatus
ENSMOCG00000019519	-	100	87.654	ENSLAFG00000017341	PUM3	100	87.654	Loxodonta_africana
ENSMOCG00000019519	-	99	91.345	ENSMFAG00000001430	PUM3	100	91.345	Macaca_fascicularis
ENSMOCG00000019519	-	99	91.345	ENSMMUG00000002362	PUM3	99	91.345	Macaca_mulatta
ENSMOCG00000019519	-	99	91.345	ENSMNEG00000035288	PUM3	100	91.345	Macaca_nemestrina
ENSMOCG00000019519	-	99	91.499	ENSMLEG00000034820	PUM3	100	91.499	Mandrillus_leucophaeus
ENSMOCG00000019519	-	82	60.861	ENSMAMG00000022861	pum3	98	55.296	Mastacembelus_armatus
ENSMOCG00000019519	-	99	54.938	ENSMZEG00005014205	pum3	95	54.700	Maylandia_zebra
ENSMOCG00000019519	-	96	65.224	ENSMGAG00000002255	PUM3	99	64.348	Meleagris_gallopavo
ENSMOCG00000019519	-	100	96.914	ENSMAUG00000009733	Pum3	100	96.914	Mesocricetus_auratus
ENSMOCG00000019519	-	99	90.402	ENSMICG00000045916	PUM3	87	90.402	Microcebus_murinus
ENSMOCG00000019519	-	92	53.409	ENSMMOG00000012184	pum3	83	56.926	Mola_mola
ENSMOCG00000019519	-	99	68.377	ENSMODG00000015417	PUM3	100	67.773	Monodelphis_domestica
ENSMOCG00000019519	-	82	60.187	ENSMALG00000022164	pum3	93	54.890	Monopterus_albus
ENSMOCG00000019519	-	100	93.827	MGP_CAROLIEiJ_G0022845	Pum3	100	93.827	Mus_caroli
ENSMOCG00000019519	-	100	93.981	ENSMUSG00000041360	Pum3	100	93.981	Mus_musculus
ENSMOCG00000019519	-	99	94.281	MGP_PahariEiJ_G0014338	Pum3	99	94.281	Mus_pahari
ENSMOCG00000019519	-	100	93.827	MGP_SPRETEiJ_G0023763	Pum3	100	93.827	Mus_spretus
ENSMOCG00000019519	-	99	87.481	ENSMPUG00000005125	PUM3	100	87.481	Mustela_putorius_furo
ENSMOCG00000019519	-	99	88.700	ENSMLUG00000002309	PUM3	99	88.700	Myotis_lucifugus
ENSMOCG00000019519	-	100	89.335	ENSNGAG00000019468	Pum3	100	89.335	Nannospalax_galili
ENSMOCG00000019519	-	91	55.143	ENSNBRG00000021370	pum3	79	59.841	Neolamprologus_brichardi
ENSMOCG00000019519	-	99	91.345	ENSNLEG00000008712	PUM3	100	91.345	Nomascus_leucogenys
ENSMOCG00000019519	-	66	82.305	ENSMEUG00000013606	-	81	82.305	Notamacropus_eugenii
ENSMOCG00000019519	-	69	93.617	ENSOPRG00000004225	-	67	94.737	Ochotona_princeps
ENSMOCG00000019519	-	100	88.735	ENSODEG00000003625	-	100	88.735	Octodon_degus
ENSMOCG00000019519	-	99	83.692	ENSODEG00000016477	-	100	83.692	Octodon_degus
ENSMOCG00000019519	-	99	54.475	ENSONIG00000012733	pum3	97	54.167	Oreochromis_niloticus
ENSMOCG00000019519	-	84	76.965	ENSOANG00000014995	PUM3	100	76.965	Ornithorhynchus_anatinus
ENSMOCG00000019519	-	99	89.335	ENSOCUG00000004189	-	100	89.335	Oryctolagus_cuniculus
ENSMOCG00000019519	-	99	88.629	ENSOCUG00000026104	-	99	88.629	Oryctolagus_cuniculus
ENSMOCG00000019519	-	94	53.607	ENSORLG00000014935	pum3	99	52.888	Oryzias_latipes
ENSMOCG00000019519	-	94	53.607	ENSORLG00020002841	pum3	99	53.120	Oryzias_latipes_hni
ENSMOCG00000019519	-	99	53.282	ENSORLG00015015906	pum3	99	52.977	Oryzias_latipes_hsok
ENSMOCG00000019519	-	94	54.112	ENSOMEG00000009427	pum3	89	54.146	Oryzias_melastigma
ENSMOCG00000019519	-	99	88.117	ENSOGAG00000008125	-	100	88.117	Otolemur_garnettii
ENSMOCG00000019519	-	99	65.291	ENSOGAG00000033481	-	99	63.914	Otolemur_garnettii
ENSMOCG00000019519	-	99	88.136	ENSOARG00000013337	PUM3	100	88.136	Ovis_aries
ENSMOCG00000019519	-	99	91.204	ENSPPAG00000041337	PUM3	100	91.204	Pan_paniscus
ENSMOCG00000019519	-	99	87.481	ENSPPRG00000000809	PUM3	100	87.481	Panthera_pardus
ENSMOCG00000019519	-	99	87.635	ENSPTIG00000021934	PUM3	100	87.635	Panthera_tigris_altaica
ENSMOCG00000019519	-	99	91.358	ENSPTRG00000020735	PUM3	100	91.358	Pan_troglodytes
ENSMOCG00000019519	-	99	91.499	ENSPANG00000025118	PUM3	100	91.499	Papio_anubis
ENSMOCG00000019519	-	99	62.844	ENSPKIG00000022249	pum3	99	64.793	Paramormyrops_kingsleyae
ENSMOCG00000019519	-	99	72.025	ENSPSIG00000016272	PUM3	100	72.025	Pelodiscus_sinensis
ENSMOCG00000019519	-	76	61.460	ENSPMGG00000021261	pum3	99	61.460	Periophthalmus_magnuspinnatus
ENSMOCG00000019519	-	90	92.105	ENSPEMG00000019340	-	100	92.105	Peromyscus_maniculatus_bairdii
ENSMOCG00000019519	-	99	75.896	ENSPCIG00000030598	PUM3	93	75.896	Phascolarctos_cinereus
ENSMOCG00000019519	-	91	56.500	ENSPFOG00000001719	pum3	99	54.462	Poecilia_formosa
ENSMOCG00000019519	-	99	54.103	ENSPLAG00000020010	pum3	99	54.103	Poecilia_latipinna
ENSMOCG00000019519	-	99	54.255	ENSPMEG00000017451	pum3	99	54.255	Poecilia_mexicana
ENSMOCG00000019519	-	51	46.759	ENSPREG00000019478	-	69	65.263	Poecilia_reticulata
ENSMOCG00000019519	-	99	91.499	ENSPPYG00000019255	PUM3	100	91.499	Pongo_abelii
ENSMOCG00000019519	-	100	75.309	ENSPCAG00000005797	PUM3	95	75.309	Procavia_capensis
ENSMOCG00000019519	-	99	89.645	ENSPCOG00000027325	PUM3	100	89.645	Propithecus_coquereli
ENSMOCG00000019519	-	100	86.420	ENSPVAG00000016135	PUM3	95	86.420	Pteropus_vampyrus
ENSMOCG00000019519	-	99	55.538	ENSPNYG00000016124	pum3	97	55.226	Pundamilia_nyererei
ENSMOCG00000019519	-	89	65.345	ENSPNAG00000026524	pum3	92	65.345	Pygocentrus_nattereri
ENSMOCG00000019519	-	99	91.963	ENSRNOG00000048356	RGD1308750	100	91.963	Rattus_norvegicus
ENSMOCG00000019519	-	99	92.272	ENSRNOG00000012574	Pum3	100	92.272	Rattus_norvegicus
ENSMOCG00000019519	-	99	91.641	ENSRBIG00000036924	PUM3	100	91.345	Rhinopithecus_bieti
ENSMOCG00000019519	-	99	91.499	ENSRROG00000041089	PUM3	100	91.499	Rhinopithecus_roxellana
ENSMOCG00000019519	-	99	91.654	ENSSBOG00000028066	PUM3	100	91.654	Saimiri_boliviensis_boliviensis
ENSMOCG00000019519	-	99	78.120	ENSSHAG00000003730	PUM3	100	78.120	Sarcophilus_harrisii
ENSMOCG00000019519	-	94	65.756	ENSSFOG00015018778	pum3	99	63.817	Scleropages_formosus
ENSMOCG00000019519	-	86	59.750	ENSSMAG00000013236	pum3	99	55.053	Scophthalmus_maximus
ENSMOCG00000019519	-	96	57.258	ENSSDUG00000001887	pum3	99	54.505	Seriola_dumerili
ENSMOCG00000019519	-	99	54.709	ENSSLDG00000015766	pum3	99	54.491	Seriola_lalandi_dorsalis
ENSMOCG00000019519	-	96	84.814	ENSSARG00000000579	PUM3	100	84.814	Sorex_araneus
ENSMOCG00000019519	-	99	69.552	ENSSPUG00000001707	PUM3	100	69.552	Sphenodon_punctatus
ENSMOCG00000019519	-	99	53.363	ENSSPAG00000003976	pum3	99	53.223	Stegastes_partitus
ENSMOCG00000019519	-	100	89.198	ENSSSCG00000005227	PUM3	100	89.198	Sus_scrofa
ENSMOCG00000019519	-	99	71.097	ENSTGUG00000005339	PUM3	100	71.097	Taeniopygia_guttata
ENSMOCG00000019519	-	95	56.031	ENSTRUG00000004074	pum3	79	62.333	Takifugu_rubripes
ENSMOCG00000019519	-	86	60.391	ENSTNIG00000010325	pum3	99	57.649	Tetraodon_nigroviridis
ENSMOCG00000019519	-	86	70.736	ENSTBEG00000013058	PUM3	86	70.736	Tupaia_belangeri
ENSMOCG00000019519	-	100	80.556	ENSTTRG00000001062	PUM3	96	80.556	Tursiops_truncatus
ENSMOCG00000019519	-	100	82.326	ENSUMAG00000018443	PUM3	99	84.630	Ursus_maritimus
ENSMOCG00000019519	-	100	89.060	ENSVPAG00000010766	PUM3	99	89.060	Vicugna_pacos
ENSMOCG00000019519	-	100	89.198	ENSVVUG00000006527	PUM3	100	89.198	Vulpes_vulpes
ENSMOCG00000019519	-	99	59.140	ENSXETG00000011707	pum3	96	60.476	Xenopus_tropicalis
ENSMOCG00000019519	-	91	55.150	ENSXCOG00000006725	pum3	87	58.206	Xiphophorus_couchianus
ENSMOCG00000019519	-	91	56.931	ENSXMAG00000002926	pum3	99	53.343	Xiphophorus_maculatus