EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000019833 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 101990 bases
Position: chr6:158291-260280
Accession: 102002068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000022990	R3H	PF01424.22	2.7e-12	1	1
ENSMOCP00000022987	R3H	PF01424.22	6.6e-12	1	1
ENSMOCP00000022984	R3H	PF01424.22	7.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000026834	-	2097	XM_013346658	ENSMOCP00000022984	549 (aa)	XP_013202112	-
ENSMOCT00000026828	-	4728	XM_013346656	ENSMOCP00000022978	384 (aa)	XP_013202110	-
ENSMOCT00000026840	-	861	-	ENSMOCP00000022990	287 (aa)	-	-
ENSMOCT00000026837	-	1458	-	ENSMOCP00000022987	486 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000019833's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000019833's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000019833	-	99	95.406	ENSG00000048991	R3HDM1	99	95.406	Homo_sapiens
ENSMOCG00000019833	-	90	55.357	ENSACIG00000018791	-	81	57.178	Amphilophus_citrinellus
ENSMOCG00000019833	-	100	79.070	ENSAPLG00000015231	R3HDM1	50	83.241	Anas_platyrhynchos
ENSMOCG00000019833	-	99	93.542	ENSANAG00000035334	R3HDM1	50	93.542	Aotus_nancymaae
ENSMOCG00000019833	-	99	68.301	ENSAMXG00000012861	R3HDM1	58	56.061	Astyanax_mexicanus
ENSMOCG00000019833	-	79	56.769	ENSAMXG00000020587	arpp21	53	56.452	Astyanax_mexicanus
ENSMOCG00000019833	-	99	94.280	ENSCAFG00020016119	R3HDM1	99	90.346	Canis_lupus_dingo
ENSMOCG00000019833	-	100	81.185	ENSCAPG00000013043	-	100	81.185	Cavia_aperea
ENSMOCG00000019833	-	100	91.289	ENSCPOG00000012784	R3HDM1	100	91.561	Cavia_porcellus
ENSMOCG00000019833	-	100	93.728	ENSCLAG00000007962	R3HDM1	100	93.728	Chinchilla_lanigera
ENSMOCG00000019833	-	100	99.303	ENSCGRG00000012080	R3hdm1	100	99.303	Cricetulus_griseus_crigri
ENSMOCG00000019833	-	100	58.844	ENSCSEG00000008944	r3hdm1	50	53.803	Cynoglossus_semilaevis
ENSMOCG00000019833	-	100	63.545	ENSCVAG00000007582	r3hdm1	51	55.932	Cyprinodon_variegatus
ENSMOCG00000019833	-	79	54.825	ENSDARG00000061081	arpp21	50	61.364	Danio_rerio
ENSMOCG00000019833	-	99	87.614	ENSDNOG00000000771	R3HDM1	50	87.614	Dasypus_novemcinctus
ENSMOCG00000019833	-	100	96.864	ENSDORG00000027689	-	100	96.864	Dipodomys_ordii
ENSMOCG00000019833	-	87	49.336	ENSEBUG00000014746	arpp21	64	51.402	Eptatretus_burgeri
ENSMOCG00000019833	-	100	94.077	ENSFDAG00000016478	R3HDM1	100	94.077	Fukomys_damarensis
ENSMOCG00000019833	-	100	65.529	ENSFHEG00000018713	r3hdm1	54	58.286	Fundulus_heteroclitus
ENSMOCG00000019833	-	95	84.687	ENSGAGG00000007840	R3HDM1	50	81.181	Gopherus_agassizii
ENSMOCG00000019833	-	100	95.470	ENSGGOG00000008156	R3HDM1	56	90.239	Gorilla_gorilla
ENSMOCG00000019833	-	100	62.542	ENSHBUG00000015737	R3HDM1	90	58.175	Haplochromis_burtoni
ENSMOCG00000019833	-	100	94.077	ENSHGLG00000015718	R3HDM1	100	94.077	Heterocephalus_glaber_female
ENSMOCG00000019833	-	100	93.728	ENSHGLG00100003184	-	100	93.728	Heterocephalus_glaber_male
ENSMOCG00000019833	-	82	60.000	ENSHCOG00000013366	r3hdm1	88	60.000	Hippocampus_comes
ENSMOCG00000019833	-	56	58.896	ENSHCOG00000005036	-	63	40.157	Hippocampus_comes
ENSMOCG00000019833	-	99	69.492	ENSIPUG00000001676	R3HDM1	52	59.475	Ictalurus_punctatus
ENSMOCG00000019833	-	100	95.470	ENSSTOG00000007572	R3HDM1	100	95.470	Ictidomys_tridecemlineatus
ENSMOCG00000019833	-	100	95.122	ENSJJAG00000018208	-	100	95.122	Jaculus_jaculus
ENSMOCG00000019833	-	56	75.439	ENSKMAG00000013373	-	86	75.439	Kryptolebias_marmoratus
ENSMOCG00000019833	-	100	57.679	ENSLBEG00000027981	-	94	60.592	Labrus_bergylta
ENSMOCG00000019833	-	100	91.030	ENSMFAG00000030331	R3HDM1	51	84.906	Macaca_fascicularis
ENSMOCG00000019833	-	100	91.030	ENSMNEG00000027793	R3HDM1	51	84.906	Macaca_nemestrina
ENSMOCG00000019833	-	100	64.846	ENSMAMG00000004532	r3hdm1	50	58.588	Mastacembelus_armatus
ENSMOCG00000019833	-	100	62.542	ENSMZEG00005003157	r3hdm1	50	58.175	Maylandia_zebra
ENSMOCG00000019833	-	100	78.405	ENSMGAG00000012461	R3HDM1	50	82.136	Meleagris_gallopavo
ENSMOCG00000019833	-	100	99.652	ENSMAUG00000010315	R3hdm1	100	99.652	Mesocricetus_auratus
ENSMOCG00000019833	-	100	81.090	ENSMODG00000000923	R3HDM1	52	84.448	Monodelphis_domestica
ENSMOCG00000019833	-	100	98.606	MGP_CAROLIEiJ_G0014543	R3hdm1	100	98.606	Mus_caroli
ENSMOCG00000019833	-	100	98.606	ENSMUSG00000056211	R3hdm1	100	98.606	Mus_musculus
ENSMOCG00000019833	-	100	98.258	MGP_PahariEiJ_G0027779	R3hdm1	100	98.258	Mus_pahari
ENSMOCG00000019833	-	100	98.606	MGP_SPRETEiJ_G0015350	R3hdm1	100	98.606	Mus_spretus
ENSMOCG00000019833	-	100	96.167	ENSNGAG00000001313	-	100	96.167	Nannospalax_galili
ENSMOCG00000019833	-	94	74.612	ENSMEUG00000011784	R3HDM1	56	74.539	Notamacropus_eugenii
ENSMOCG00000019833	-	100	94.774	ENSODEG00000008607	R3HDM1	100	94.774	Octodon_degus
ENSMOCG00000019833	-	100	85.714	ENSOANG00000007987	R3HDM1	50	85.294	Ornithorhynchus_anatinus
ENSMOCG00000019833	-	99	94.096	ENSOCUG00000017366	R3HDM1	54	94.096	Oryctolagus_cuniculus
ENSMOCG00000019833	-	100	64.505	ENSORLG00000004297	r3hdm1	50	58.317	Oryzias_latipes
ENSMOCG00000019833	-	100	64.505	ENSORLG00020019252	-	88	59.446	Oryzias_latipes_hni
ENSMOCG00000019833	-	100	64.505	ENSORLG00015017355	r3hdm1	52	58.509	Oryzias_latipes_hsok
ENSMOCG00000019833	-	100	62.951	ENSOMEG00000003882	-	94	58.126	Oryzias_melastigma
ENSMOCG00000019833	-	100	65.517	ENSPKIG00000011224	R3HDM1	90	63.504	Paramormyrops_kingsleyae
ENSMOCG00000019833	-	100	79.402	ENSPSIG00000012915	R3HDM1	50	83.610	Pelodiscus_sinensis
ENSMOCG00000019833	-	87	53.468	ENSPMGG00000011264	-	91	54.253	Periophthalmus_magnuspinnatus
ENSMOCG00000019833	-	100	99.303	ENSPEMG00000015187	R3hdm1	100	99.303	Peromyscus_maniculatus_bairdii
ENSMOCG00000019833	-	100	89.619	ENSPCIG00000002491	R3HDM1	50	87.316	Phascolarctos_cinereus
ENSMOCG00000019833	-	100	63.823	ENSPREG00000007902	r3hdm1	88	61.520	Poecilia_reticulata
ENSMOCG00000019833	-	100	62.542	ENSPNYG00000008701	-	97	59.569	Pundamilia_nyererei
ENSMOCG00000019833	-	93	43.580	ENSPNAG00000004162	arpp21	51	57.600	Pygocentrus_nattereri
ENSMOCG00000019833	-	68	81.281	ENSPNAG00000005436	R3HDM1	53	54.898	Pygocentrus_nattereri
ENSMOCG00000019833	-	100	85.762	ENSSHAG00000016999	R3HDM1	50	87.293	Sarcophilus_harrisii
ENSMOCG00000019833	-	100	65.798	ENSSFOG00015019851	-	52	61.664	Scleropages_formosus
ENSMOCG00000019833	-	95	85.605	ENSSPUG00000004167	R3HDM1	50	84.375	Sphenodon_punctatus
ENSMOCG00000019833	-	100	65.529	ENSSPAG00000004648	r3hdm1	51	59.195	Stegastes_partitus
ENSMOCG00000019833	-	99	94.465	ENSUAMG00000024806	R3HDM1	99	91.788	Ursus_americanus
ENSMOCG00000019833	-	86	80.998	ENSXETG00000019330	r3hdm1	54	71.702	Xenopus_tropicalis
ENSMOCG00000019833	-	83	60.900	ENSXCOG00000017448	r3hdm1	54	61.137	Xiphophorus_couchianus
ENSMOCG00000019833	-	100	64.214	ENSXMAG00000007885	r3hdm1	50	56.391	Xiphophorus_maculatus