EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000019886 (Gene tree)
Gene ID: 101988829
Gene Symbol: Mtrex
Alias: 2610528A15Rik|Skiv2l2
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 58768 bases
Position: chr19:59018656-59077423
Accession: 101988829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000023068	rRNA_proc-arch	PF13234.6	6.1e-87	1	1
ENSMOCP00000023068	DEAD	PF00270.29	4.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000026918	-	3547	XM_005356805	ENSMOCP00000023068	1042 (aa)	XP_005356862	UPI00038BBF19

Gene Model

Click here to download ENSMOCG00000019886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000019886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000019886	Mtrex	88	36.004	ENSMOCG00000014240	Skiv2l	76	36.108

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000019886	Mtrex	100	97.697	ENSG00000039123	MTREX	100	97.697	Homo_sapiens
ENSMOCG00000019886	Mtrex	100	83.015	ENSAPOG00000007814	mtrex	100	82.936	Acanthochromis_polyacanthus
ENSMOCG00000019886	Mtrex	100	97.315	ENSAMEG00000013856	MTREX	100	97.315	Ailuropoda_melanoleuca
ENSMOCG00000019886	Mtrex	91	87.983	ENSACIG00000015117	mtrex	96	87.983	Amphilophus_citrinellus
ENSMOCG00000019886	Mtrex	100	83.127	ENSAOCG00000011884	mtrex	100	83.127	Amphiprion_ocellaris
ENSMOCG00000019886	Mtrex	100	83.031	ENSAPEG00000019384	mtrex	100	83.031	Amphiprion_percula
ENSMOCG00000019886	Mtrex	100	83.699	ENSATEG00000015117	mtrex	100	83.699	Anabas_testudineus
ENSMOCG00000019886	Mtrex	94	93.961	ENSAPLG00000009694	MTREX	98	93.961	Anas_platyrhynchos
ENSMOCG00000019886	Mtrex	100	91.171	ENSACAG00000015200	MTREX	96	91.171	Anolis_carolinensis
ENSMOCG00000019886	Mtrex	100	97.697	ENSANAG00000023095	MTREX	100	97.697	Aotus_nancymaae
ENSMOCG00000019886	Mtrex	100	82.476	ENSACLG00000001921	mtrex	100	82.571	Astatotilapia_calliptera
ENSMOCG00000019886	Mtrex	97	81.631	ENSAMXG00000018751	mtrex	99	83.635	Astyanax_mexicanus
ENSMOCG00000019886	Mtrex	100	97.313	ENSBTAG00000010518	MTREX	100	97.313	Bos_taurus
ENSMOCG00000019886	Mtrex	91	53.838	WBGene00012342	mtr-4	92	53.838	Caenorhabditis_elegans
ENSMOCG00000019886	Mtrex	100	96.756	ENSCJAG00000001773	MTREX	100	96.756	Callithrix_jacchus
ENSMOCG00000019886	Mtrex	100	97.409	ENSCAFG00000006818	MTREX	100	97.409	Canis_familiaris
ENSMOCG00000019886	Mtrex	100	97.409	ENSCAFG00020024352	MTREX	100	97.409	Canis_lupus_dingo
ENSMOCG00000019886	Mtrex	100	97.409	ENSCHIG00000024413	MTREX	100	97.409	Capra_hircus
ENSMOCG00000019886	Mtrex	94	97.846	ENSTSYG00000007389	MTREX	100	97.846	Carlito_syrichta
ENSMOCG00000019886	Mtrex	96	72.745	ENSCAPG00000008696	MTREX	100	72.745	Cavia_aperea
ENSMOCG00000019886	Mtrex	100	97.121	ENSCPOG00000009797	MTREX	100	97.121	Cavia_porcellus
ENSMOCG00000019886	Mtrex	100	97.601	ENSCCAG00000014177	MTREX	100	97.601	Cebus_capucinus
ENSMOCG00000019886	Mtrex	100	97.505	ENSCATG00000042153	MTREX	100	97.505	Cercocebus_atys
ENSMOCG00000019886	Mtrex	100	96.737	ENSCLAG00000006622	MTREX	100	96.737	Chinchilla_lanigera
ENSMOCG00000019886	Mtrex	100	93.014	ENSCSAG00000016445	MTREX	100	93.014	Chlorocebus_sabaeus
ENSMOCG00000019886	Mtrex	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSMOCG00000019886	Mtrex	100	90.857	ENSCPBG00000026551	MTREX	94	92.426	Chrysemys_picta_bellii
ENSMOCG00000019886	Mtrex	99	66.126	ENSCING00000003239	-	99	65.966	Ciona_intestinalis
ENSMOCG00000019886	Mtrex	99	65.205	ENSCSAVG00000009304	-	100	69.785	Ciona_savignyi
ENSMOCG00000019886	Mtrex	100	97.409	ENSCANG00000035770	MTREX	100	97.409	Colobus_angolensis_palliatus
ENSMOCG00000019886	Mtrex	100	99.040	ENSCGRG00001024680	Mtrex	100	99.040	Cricetulus_griseus_chok1gshd
ENSMOCG00000019886	Mtrex	100	99.040	ENSCGRG00000000307	Mtrex	100	99.040	Cricetulus_griseus_crigri
ENSMOCG00000019886	Mtrex	100	81.948	ENSCSEG00000018621	mtrex	98	81.853	Cynoglossus_semilaevis
ENSMOCG00000019886	Mtrex	100	83.572	ENSCVAG00000004556	mtrex	100	83.508	Cyprinodon_variegatus
ENSMOCG00000019886	Mtrex	100	84.814	ENSDARG00000013457	mtrex	100	84.527	Danio_rerio
ENSMOCG00000019886	Mtrex	100	96.080	ENSDNOG00000015375	MTREX	100	95.985	Dasypus_novemcinctus
ENSMOCG00000019886	Mtrex	100	97.121	ENSDORG00000006782	Mtrex	100	97.121	Dipodomys_ordii
ENSMOCG00000019886	Mtrex	99	62.677	FBgn0001986	Mtr4	94	65.507	Drosophila_melanogaster
ENSMOCG00000019886	Mtrex	90	79.642	ENSETEG00000000727	MTREX	90	79.642	Echinops_telfairi
ENSMOCG00000019886	Mtrex	99	74.302	ENSEBUG00000012869	mtrex	99	73.709	Eptatretus_burgeri
ENSMOCG00000019886	Mtrex	100	96.929	ENSEASG00005013270	MTREX	100	96.929	Equus_asinus_asinus
ENSMOCG00000019886	Mtrex	100	97.025	ENSECAG00000023723	MTREX	100	99.074	Equus_caballus
ENSMOCG00000019886	Mtrex	98	87.707	ENSEEUG00000000527	MTREX	100	87.707	Erinaceus_europaeus
ENSMOCG00000019886	Mtrex	98	84.720	ENSELUG00000004898	mtrex	100	89.391	Esox_lucius
ENSMOCG00000019886	Mtrex	100	97.505	ENSFCAG00000010575	MTREX	100	97.505	Felis_catus
ENSMOCG00000019886	Mtrex	100	90.307	ENSFALG00000010850	MTREX	100	90.307	Ficedula_albicollis
ENSMOCG00000019886	Mtrex	100	96.353	ENSFDAG00000011199	MTREX	100	96.257	Fukomys_damarensis
ENSMOCG00000019886	Mtrex	100	83.477	ENSFHEG00000023014	mtrex	100	82.713	Fundulus_heteroclitus
ENSMOCG00000019886	Mtrex	100	79.485	ENSGMOG00000014702	mtrex	100	79.866	Gadus_morhua
ENSMOCG00000019886	Mtrex	100	91.371	ENSGALG00000014709	MTREX	86	91.371	Gallus_gallus
ENSMOCG00000019886	Mtrex	100	83.683	ENSGAFG00000012425	mtrex	100	83.222	Gambusia_affinis
ENSMOCG00000019886	Mtrex	100	79.370	ENSGACG00000016260	mtrex	96	85.109	Gasterosteus_aculeatus
ENSMOCG00000019886	Mtrex	100	90.580	ENSGAGG00000020036	MTREX	100	91.213	Gopherus_agassizii
ENSMOCG00000019886	Mtrex	100	97.793	ENSGGOG00000001867	MTREX	100	97.793	Gorilla_gorilla
ENSMOCG00000019886	Mtrex	100	82.476	ENSHBUG00000006229	mtrex	100	82.571	Haplochromis_burtoni
ENSMOCG00000019886	Mtrex	100	96.641	ENSHGLG00000019445	SKIV2L2	100	96.641	Heterocephalus_glaber_female
ENSMOCG00000019886	Mtrex	100	96.641	ENSHGLG00100011833	SKIV2L2	100	96.641	Heterocephalus_glaber_male
ENSMOCG00000019886	Mtrex	91	84.827	ENSHCOG00000019995	mtrex	100	84.827	Hippocampus_comes
ENSMOCG00000019886	Mtrex	100	85.468	ENSIPUG00000024348	skiv2l2	100	85.468	Ictalurus_punctatus
ENSMOCG00000019886	Mtrex	100	97.505	ENSSTOG00000010802	MTREX	100	97.505	Ictidomys_tridecemlineatus
ENSMOCG00000019886	Mtrex	100	90.787	ENSJJAG00000020975	Mtrex	100	90.787	Jaculus_jaculus
ENSMOCG00000019886	Mtrex	100	82.999	ENSKMAG00000012642	mtrex	100	82.729	Kryptolebias_marmoratus
ENSMOCG00000019886	Mtrex	100	83.397	ENSLBEG00000019367	mtrex	99	86.027	Labrus_bergylta
ENSMOCG00000019886	Mtrex	100	88.230	ENSLACG00000009075	MTREX	100	87.691	Latimeria_chalumnae
ENSMOCG00000019886	Mtrex	100	86.973	ENSLOCG00000010186	mtrex	100	86.686	Lepisosteus_oculatus
ENSMOCG00000019886	Mtrex	99	95.010	ENSLAFG00000010497	MTREX	100	95.010	Loxodonta_africana
ENSMOCG00000019886	Mtrex	100	97.505	ENSMFAG00000031610	MTREX	100	97.505	Macaca_fascicularis
ENSMOCG00000019886	Mtrex	100	96.552	ENSMMUG00000010379	MTREX	100	96.552	Macaca_mulatta
ENSMOCG00000019886	Mtrex	100	97.505	ENSMNEG00000032746	MTREX	100	97.505	Macaca_nemestrina
ENSMOCG00000019886	Mtrex	100	97.505	ENSMLEG00000041051	MTREX	100	97.505	Mandrillus_leucophaeus
ENSMOCG00000019886	Mtrex	95	86.172	ENSMAMG00000016753	mtrex	96	88.309	Mastacembelus_armatus
ENSMOCG00000019886	Mtrex	100	82.476	ENSMZEG00005000414	mtrex	100	82.571	Maylandia_zebra
ENSMOCG00000019886	Mtrex	94	67.882	ENSMGAG00000003980	MTREX	99	67.882	Meleagris_gallopavo
ENSMOCG00000019886	Mtrex	100	98.944	ENSMAUG00000010727	Mtrex	100	98.944	Mesocricetus_auratus
ENSMOCG00000019886	Mtrex	100	98.081	ENSMICG00000012779	MTREX	100	98.081	Microcebus_murinus
ENSMOCG00000019886	Mtrex	100	81.584	ENSMMOG00000002476	mtrex	100	81.584	Mola_mola
ENSMOCG00000019886	Mtrex	100	92.898	ENSMODG00000019494	MTREX	100	93.282	Monodelphis_domestica
ENSMOCG00000019886	Mtrex	92	82.395	ENSMALG00000002917	mtrex	99	82.395	Monopterus_albus
ENSMOCG00000019886	Mtrex	100	97.985	MGP_CAROLIEiJ_G0018896	Mtrex	100	97.985	Mus_caroli
ENSMOCG00000019886	Mtrex	100	98.369	ENSMUSG00000016018	Mtrex	100	98.369	Mus_musculus
ENSMOCG00000019886	Mtrex	100	98.177	MGP_PahariEiJ_G0015967	Mtrex	100	98.177	Mus_pahari
ENSMOCG00000019886	Mtrex	100	98.369	MGP_SPRETEiJ_G0019775	Mtrex	100	98.369	Mus_spretus
ENSMOCG00000019886	Mtrex	100	97.601	ENSMPUG00000007619	MTREX	100	97.601	Mustela_putorius_furo
ENSMOCG00000019886	Mtrex	100	95.885	ENSMLUG00000001152	MTREX	100	95.885	Myotis_lucifugus
ENSMOCG00000019886	Mtrex	100	98.273	ENSNGAG00000011938	Mtrex	100	98.273	Nannospalax_galili
ENSMOCG00000019886	Mtrex	100	82.571	ENSNBRG00000011293	mtrex	100	82.667	Neolamprologus_brichardi
ENSMOCG00000019886	Mtrex	100	93.582	ENSNLEG00000001494	MTREX	100	93.582	Nomascus_leucogenys
ENSMOCG00000019886	Mtrex	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSMOCG00000019886	Mtrex	100	82.246	ENSOPRG00000008009	MTREX	100	82.246	Ochotona_princeps
ENSMOCG00000019886	Mtrex	100	96.257	ENSODEG00000017234	MTREX	100	96.257	Octodon_degus
ENSMOCG00000019886	Mtrex	100	82.286	ENSONIG00000007587	mtrex	100	82.476	Oreochromis_niloticus
ENSMOCG00000019886	Mtrex	100	97.313	ENSOCUG00000004463	MTREX	100	97.313	Oryctolagus_cuniculus
ENSMOCG00000019886	Mtrex	100	82.650	ENSORLG00000005443	mtrex	100	82.521	Oryzias_latipes
ENSMOCG00000019886	Mtrex	100	82.555	ENSORLG00020006329	mtrex	100	82.426	Oryzias_latipes_hni
ENSMOCG00000019886	Mtrex	100	82.459	ENSORLG00015012924	mtrex	100	82.330	Oryzias_latipes_hsok
ENSMOCG00000019886	Mtrex	100	82.095	ENSOMEG00000008825	mtrex	100	81.732	Oryzias_melastigma
ENSMOCG00000019886	Mtrex	100	97.793	ENSOGAG00000002886	MTREX	100	97.793	Otolemur_garnettii
ENSMOCG00000019886	Mtrex	100	97.129	ENSOARG00000007764	MTREX	100	97.129	Ovis_aries
ENSMOCG00000019886	Mtrex	100	97.697	ENSPPAG00000039291	MTREX	100	97.697	Pan_paniscus
ENSMOCG00000019886	Mtrex	100	97.505	ENSPPRG00000019701	MTREX	100	97.505	Panthera_pardus
ENSMOCG00000019886	Mtrex	100	95.969	ENSPTIG00000009313	MTREX	100	95.969	Panthera_tigris_altaica
ENSMOCG00000019886	Mtrex	100	97.697	ENSPTRG00000016878	MTREX	100	97.697	Pan_troglodytes
ENSMOCG00000019886	Mtrex	100	97.409	ENSPANG00000009697	MTREX	100	97.409	Papio_anubis
ENSMOCG00000019886	Mtrex	100	86.533	ENSPKIG00000020833	mtrex	100	86.533	Paramormyrops_kingsleyae
ENSMOCG00000019886	Mtrex	100	90.744	ENSPSIG00000012150	MTREX	100	91.977	Pelodiscus_sinensis
ENSMOCG00000019886	Mtrex	100	81.125	ENSPMGG00000002582	mtrex	100	81.030	Periophthalmus_magnuspinnatus
ENSMOCG00000019886	Mtrex	95	65.196	ENSPMAG00000009668	mtrex	100	64.995	Petromyzon_marinus
ENSMOCG00000019886	Mtrex	91	96.621	ENSPCIG00000024730	MTREX	100	96.621	Phascolarctos_cinereus
ENSMOCG00000019886	Mtrex	75	86.946	ENSPFOG00000003141	mtrex	100	87.183	Poecilia_formosa
ENSMOCG00000019886	Mtrex	100	83.683	ENSPLAG00000021311	mtrex	100	83.779	Poecilia_latipinna
ENSMOCG00000019886	Mtrex	91	87.408	ENSPMEG00000010597	mtrex	99	87.723	Poecilia_mexicana
ENSMOCG00000019886	Mtrex	100	83.397	ENSPREG00000003089	mtrex	100	83.492	Poecilia_reticulata
ENSMOCG00000019886	Mtrex	98	97.756	ENSPPYG00000015469	MTREX	98	97.756	Pongo_abelii
ENSMOCG00000019886	Mtrex	94	82.791	ENSPCAG00000013120	MTREX	94	82.791	Procavia_capensis
ENSMOCG00000019886	Mtrex	99	91.903	ENSPCOG00000018092	MTREX	100	91.903	Propithecus_coquereli
ENSMOCG00000019886	Mtrex	100	97.697	ENSPVAG00000002445	MTREX	100	97.697	Pteropus_vampyrus
ENSMOCG00000019886	Mtrex	100	82.381	ENSPNYG00000006164	mtrex	100	82.476	Pundamilia_nyererei
ENSMOCG00000019886	Mtrex	100	85.864	ENSPNAG00000008794	mtrex	100	85.960	Pygocentrus_nattereri
ENSMOCG00000019886	Mtrex	99	98.056	ENSRNOG00000010125	Mtrex	97	98.056	Rattus_norvegicus
ENSMOCG00000019886	Mtrex	100	95.777	ENSRBIG00000034930	MTREX	100	95.777	Rhinopithecus_bieti
ENSMOCG00000019886	Mtrex	100	97.505	ENSRROG00000039895	MTREX	100	97.505	Rhinopithecus_roxellana
ENSMOCG00000019886	Mtrex	89	55.451	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSMOCG00000019886	Mtrex	100	97.505	ENSSBOG00000026693	MTREX	100	97.505	Saimiri_boliviensis_boliviensis
ENSMOCG00000019886	Mtrex	96	94.985	ENSSHAG00000004600	MTREX	100	94.985	Sarcophilus_harrisii
ENSMOCG00000019886	Mtrex	100	87.189	ENSSFOG00015014355	skiv2l2	100	87.189	Scleropages_formosus
ENSMOCG00000019886	Mtrex	100	82.841	ENSSMAG00000007572	mtrex	100	82.841	Scophthalmus_maximus
ENSMOCG00000019886	Mtrex	100	83.429	ENSSDUG00000023789	mtrex	100	83.492	Seriola_dumerili
ENSMOCG00000019886	Mtrex	100	83.492	ENSSLDG00000006301	mtrex	100	83.492	Seriola_lalandi_dorsalis
ENSMOCG00000019886	Mtrex	100	94.146	ENSSARG00000008387	MTREX	100	94.146	Sorex_araneus
ENSMOCG00000019886	Mtrex	100	78.817	ENSSPUG00000007071	MTREX	100	79.789	Sphenodon_punctatus
ENSMOCG00000019886	Mtrex	91	87.303	ENSSPAG00000011319	mtrex	94	87.723	Stegastes_partitus
ENSMOCG00000019886	Mtrex	100	97.409	ENSSSCG00000016911	MTREX	100	97.409	Sus_scrofa
ENSMOCG00000019886	Mtrex	100	90.125	ENSTGUG00000002480	MTREX	100	89.827	Taeniopygia_guttata
ENSMOCG00000019886	Mtrex	100	83.111	ENSTRUG00000014571	mtrex	100	82.936	Takifugu_rubripes
ENSMOCG00000019886	Mtrex	100	81.670	ENSTBEG00000007769	MTREX	100	81.670	Tupaia_belangeri
ENSMOCG00000019886	Mtrex	100	97.121	ENSTTRG00000008678	MTREX	100	97.121	Tursiops_truncatus
ENSMOCG00000019886	Mtrex	100	97.313	ENSUAMG00000023061	MTREX	100	97.313	Ursus_americanus
ENSMOCG00000019886	Mtrex	100	96.743	ENSUMAG00000009373	MTREX	99	99.655	Ursus_maritimus
ENSMOCG00000019886	Mtrex	100	86.180	ENSVPAG00000011174	MTREX	100	86.180	Vicugna_pacos
ENSMOCG00000019886	Mtrex	100	97.601	ENSVVUG00000021337	MTREX	100	97.601	Vulpes_vulpes
ENSMOCG00000019886	Mtrex	100	88.495	ENSXETG00000032798	MTREX	100	88.495	Xenopus_tropicalis
ENSMOCG00000019886	Mtrex	100	83.477	ENSXMAG00000004799	mtrex	97	87.370	Xiphophorus_maculatus