EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000019914 (Gene tree)
Gene ID: 101985724
Gene Symbol: Trmt13
Alias: 4631408H19Rik|A930028L21Rik|Ccdc76
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 15914 bases
Position: chr21:13929126-13945039
Accession: 101985724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000023095	TRM13	PF05206.14	4.3e-92	1	1
ENSMOCP00000023095	zf-U11-48K	PF05253.12	2.5e-09	1	1
ENSMOCP00000023095	zf-TRM13_CCCH	PF11722.8	3.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000026945	-	1698	XM_005357186	ENSMOCP00000023095	481 (aa)	XP_005357243	UPI00038C1524

Gene Model

Click here to download ENSMOCG00000019914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000019914's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000019914	Trmt13	99	81.250	ENSG00000122435	TRMT13	100	81.651	Homo_sapiens
ENSMOCG00000019914	Trmt13	96	49.098	ENSAPOG00000015131	trmt13	99	49.299	Acanthochromis_polyacanthus
ENSMOCG00000019914	Trmt13	99	83.333	ENSAMEG00000008917	TRMT13	99	83.333	Ailuropoda_melanoleuca
ENSMOCG00000019914	Trmt13	98	51.240	ENSACIG00000005804	trmt13	95	50.851	Amphilophus_citrinellus
ENSMOCG00000019914	Trmt13	96	48.902	ENSAOCG00000023585	trmt13	99	49.499	Amphiprion_ocellaris
ENSMOCG00000019914	Trmt13	96	48.805	ENSAPEG00000004025	trmt13	99	48.805	Amphiprion_percula
ENSMOCG00000019914	Trmt13	98	51.340	ENSATEG00000006597	trmt13	98	51.340	Anabas_testudineus
ENSMOCG00000019914	Trmt13	88	64.637	ENSAPLG00000014924	TRMT13	99	64.637	Anas_platyrhynchos
ENSMOCG00000019914	Trmt13	95	64.270	ENSACAG00000003498	TRMT13	97	64.270	Anolis_carolinensis
ENSMOCG00000019914	Trmt13	99	82.083	ENSANAG00000019525	TRMT13	100	84.404	Aotus_nancymaae
ENSMOCG00000019914	Trmt13	97	54.008	ENSACLG00000020018	trmt13	99	54.008	Astatotilapia_calliptera
ENSMOCG00000019914	Trmt13	96	55.202	ENSAMXG00000017963	trmt13	98	55.414	Astyanax_mexicanus
ENSMOCG00000019914	Trmt13	99	81.042	ENSBTAG00000015781	TRMT13	99	81.042	Bos_taurus
ENSMOCG00000019914	Trmt13	99	80.833	ENSCJAG00000000200	TRMT13	99	84.404	Callithrix_jacchus
ENSMOCG00000019914	Trmt13	65	81.090	ENSCAFG00000020021	TRMT13	98	81.090	Canis_familiaris
ENSMOCG00000019914	Trmt13	57	88.971	ENSCAFG00020011572	TRMT13	94	88.971	Canis_lupus_dingo
ENSMOCG00000019914	Trmt13	99	81.250	ENSCHIG00000015395	TRMT13	99	81.250	Capra_hircus
ENSMOCG00000019914	Trmt13	98	77.590	ENSTSYG00000010811	TRMT13	98	86.869	Carlito_syrichta
ENSMOCG00000019914	Trmt13	75	63.636	ENSCAPG00000009085	TRMT13	100	64.187	Cavia_aperea
ENSMOCG00000019914	Trmt13	99	81.042	ENSCPOG00000000694	TRMT13	99	81.042	Cavia_porcellus
ENSMOCG00000019914	Trmt13	99	81.875	ENSCCAG00000023772	TRMT13	100	83.486	Cebus_capucinus
ENSMOCG00000019914	Trmt13	99	82.083	ENSCATG00000033556	TRMT13	100	83.486	Cercocebus_atys
ENSMOCG00000019914	Trmt13	89	80.047	ENSCLAG00000008220	TRMT13	99	80.516	Chinchilla_lanigera
ENSMOCG00000019914	Trmt13	99	81.875	ENSCSAG00000001506	TRMT13	99	81.875	Chlorocebus_sabaeus
ENSMOCG00000019914	Trmt13	99	67.015	ENSCPBG00000026671	TRMT13	99	67.015	Chrysemys_picta_bellii
ENSMOCG00000019914	Trmt13	99	82.083	ENSCANG00000034659	TRMT13	100	84.404	Colobus_angolensis_palliatus
ENSMOCG00000019914	Trmt13	99	88.981	ENSCGRG00001021601	Trmt13	99	88.981	Cricetulus_griseus_chok1gshd
ENSMOCG00000019914	Trmt13	53	85.992	ENSCGRG00000000093	-	99	85.992	Cricetulus_griseus_crigri
ENSMOCG00000019914	Trmt13	97	48.428	ENSCSEG00000000591	trmt13	99	48.428	Cynoglossus_semilaevis
ENSMOCG00000019914	Trmt13	96	49.478	ENSCVAG00000017342	trmt13	94	50.000	Cyprinodon_variegatus
ENSMOCG00000019914	Trmt13	96	56.710	ENSDARG00000102846	trmt13	97	56.710	Danio_rerio
ENSMOCG00000019914	Trmt13	57	83.453	ENSDNOG00000001710	TRMT13	85	83.453	Dasypus_novemcinctus
ENSMOCG00000019914	Trmt13	98	80.297	ENSDORG00000015808	Trmt13	98	80.297	Dipodomys_ordii
ENSMOCG00000019914	Trmt13	95	32.091	FBgn0037435	CG18048	94	32.091	Drosophila_melanogaster
ENSMOCG00000019914	Trmt13	99	68.191	ENSETEG00000005819	TRMT13	99	68.191	Echinops_telfairi
ENSMOCG00000019914	Trmt13	94	45.259	ENSEBUG00000014444	trmt13	96	45.279	Eptatretus_burgeri
ENSMOCG00000019914	Trmt13	99	83.333	ENSEASG00005015918	TRMT13	99	83.333	Equus_asinus_asinus
ENSMOCG00000019914	Trmt13	99	83.579	ENSECAG00000022626	TRMT13	99	83.579	Equus_caballus
ENSMOCG00000019914	Trmt13	74	79.195	ENSEEUG00000000294	TRMT13	75	79.195	Erinaceus_europaeus
ENSMOCG00000019914	Trmt13	97	55.085	ENSELUG00000003803	trmt13	99	55.485	Esox_lucius
ENSMOCG00000019914	Trmt13	99	82.917	ENSFCAG00000030618	TRMT13	100	87.156	Felis_catus
ENSMOCG00000019914	Trmt13	98	65.180	ENSFALG00000002424	TRMT13	98	65.180	Ficedula_albicollis
ENSMOCG00000019914	Trmt13	100	81.705	ENSFDAG00000006342	TRMT13	99	81.705	Fukomys_damarensis
ENSMOCG00000019914	Trmt13	78	51.429	ENSFHEG00000022954	trmt13	97	50.249	Fundulus_heteroclitus
ENSMOCG00000019914	Trmt13	95	49.231	ENSGMOG00000013223	trmt13	100	49.451	Gadus_morhua
ENSMOCG00000019914	Trmt13	94	64.758	ENSGALG00000005290	TRMT13	98	63.830	Gallus_gallus
ENSMOCG00000019914	Trmt13	76	50.798	ENSGAFG00000001577	trmt13	81	50.798	Gambusia_affinis
ENSMOCG00000019914	Trmt13	97	50.633	ENSGACG00000013428	trmt13	98	51.168	Gasterosteus_aculeatus
ENSMOCG00000019914	Trmt13	99	67.500	ENSGAGG00000023303	TRMT13	99	72.894	Gopherus_agassizii
ENSMOCG00000019914	Trmt13	99	81.042	ENSGGOG00000005616	TRMT13	100	80.734	Gorilla_gorilla
ENSMOCG00000019914	Trmt13	97	54.430	ENSHBUG00000007754	trmt13	99	54.430	Haplochromis_burtoni
ENSMOCG00000019914	Trmt13	100	83.576	ENSHGLG00000002164	TRMT13	99	83.576	Heterocephalus_glaber_female
ENSMOCG00000019914	Trmt13	100	83.576	ENSHGLG00100001618	TRMT13	99	83.576	Heterocephalus_glaber_male
ENSMOCG00000019914	Trmt13	97	47.346	ENSHCOG00000020553	trmt13	99	47.346	Hippocampus_comes
ENSMOCG00000019914	Trmt13	97	55.769	ENSIPUG00000024787	trmt13	99	56.170	Ictalurus_punctatus
ENSMOCG00000019914	Trmt13	99	83.958	ENSSTOG00000013483	TRMT13	100	83.958	Ictidomys_tridecemlineatus
ENSMOCG00000019914	Trmt13	98	81.741	ENSJJAG00000018012	Trmt13	99	81.741	Jaculus_jaculus
ENSMOCG00000019914	Trmt13	63	51.475	ENSKMAG00000007639	trmt13	92	51.475	Kryptolebias_marmoratus
ENSMOCG00000019914	Trmt13	96	51.681	ENSLBEG00000020238	trmt13	99	52.092	Labrus_bergylta
ENSMOCG00000019914	Trmt13	96	61.555	ENSLACG00000013153	TRMT13	99	60.957	Latimeria_chalumnae
ENSMOCG00000019914	Trmt13	96	58.099	ENSLOCG00000000418	trmt13	98	59.179	Lepisosteus_oculatus
ENSMOCG00000019914	Trmt13	77	79.730	ENSLAFG00000002383	TRMT13	100	79.730	Loxodonta_africana
ENSMOCG00000019914	Trmt13	99	81.667	ENSMFAG00000034681	TRMT13	100	84.404	Macaca_fascicularis
ENSMOCG00000019914	Trmt13	99	81.667	ENSMMUG00000004243	TRMT13	100	84.404	Macaca_mulatta
ENSMOCG00000019914	Trmt13	99	81.667	ENSMNEG00000036102	TRMT13	100	84.404	Macaca_nemestrina
ENSMOCG00000019914	Trmt13	99	82.500	ENSMLEG00000034258	TRMT13	100	85.321	Mandrillus_leucophaeus
ENSMOCG00000019914	Trmt13	97	51.055	ENSMAMG00000016597	trmt13	97	51.055	Mastacembelus_armatus
ENSMOCG00000019914	Trmt13	97	53.797	ENSMZEG00005020959	trmt13	99	53.797	Maylandia_zebra
ENSMOCG00000019914	Trmt13	88	65.957	ENSMGAG00000006970	TRMT13	99	65.957	Meleagris_gallopavo
ENSMOCG00000019914	Trmt13	99	88.958	ENSMAUG00000010448	Trmt13	99	88.958	Mesocricetus_auratus
ENSMOCG00000019914	Trmt13	99	82.917	ENSMICG00000005283	TRMT13	100	85.321	Microcebus_murinus
ENSMOCG00000019914	Trmt13	54	50.187	ENSMMOG00000007762	trmt13	90	50.187	Mola_mola
ENSMOCG00000019914	Trmt13	96	73.019	ENSMODG00000003646	TRMT13	96	73.019	Monodelphis_domestica
ENSMOCG00000019914	Trmt13	96	51.627	ENSMALG00000020965	trmt13	97	51.627	Monopterus_albus
ENSMOCG00000019914	Trmt13	99	86.611	MGP_CAROLIEiJ_G0025568	Trmt13	94	92.857	Mus_caroli
ENSMOCG00000019914	Trmt13	99	86.192	ENSMUSG00000033439	Trmt13	94	92.857	Mus_musculus
ENSMOCG00000019914	Trmt13	99	87.029	MGP_PahariEiJ_G0027014	Trmt13	99	87.029	Mus_pahari
ENSMOCG00000019914	Trmt13	99	86.820	MGP_SPRETEiJ_G0026518	Trmt13	94	92.857	Mus_spretus
ENSMOCG00000019914	Trmt13	79	78.684	ENSMPUG00000002078	-	99	78.684	Mustela_putorius_furo
ENSMOCG00000019914	Trmt13	99	76.409	ENSMLUG00000002124	TRMT13	99	76.409	Myotis_lucifugus
ENSMOCG00000019914	Trmt13	99	48.971	ENSNBRG00000006783	trmt13	97	51.173	Neolamprologus_brichardi
ENSMOCG00000019914	Trmt13	99	81.250	ENSNLEG00000035917	TRMT13	100	82.569	Nomascus_leucogenys
ENSMOCG00000019914	Trmt13	51	70.968	ENSMEUG00000013346	-	100	70.968	Notamacropus_eugenii
ENSMOCG00000019914	Trmt13	67	89.338	ENSOPRG00000012048	TRMT13	67	89.338	Ochotona_princeps
ENSMOCG00000019914	Trmt13	97	54.316	ENSONIG00000004574	trmt13	99	54.316	Oreochromis_niloticus
ENSMOCG00000019914	Trmt13	89	70.302	ENSOANG00000012057	TRMT13	99	70.302	Ornithorhynchus_anatinus
ENSMOCG00000019914	Trmt13	99	81.875	ENSOCUG00000023095	TRMT13	100	81.875	Oryctolagus_cuniculus
ENSMOCG00000019914	Trmt13	96	48.305	ENSORLG00000003320	trmt13	98	48.729	Oryzias_latipes
ENSMOCG00000019914	Trmt13	96	47.771	ENSORLG00020005972	trmt13	97	47.414	Oryzias_latipes_hni
ENSMOCG00000019914	Trmt13	96	51.805	ENSORLG00015002270	trmt13	99	51.805	Oryzias_latipes_hsok
ENSMOCG00000019914	Trmt13	96	51.266	ENSOMEG00000006724	trmt13	94	52.442	Oryzias_melastigma
ENSMOCG00000019914	Trmt13	98	83.721	ENSOGAG00000005618	TRMT13	96	83.264	Otolemur_garnettii
ENSMOCG00000019914	Trmt13	99	81.250	ENSOARG00000017983	TRMT13	99	81.250	Ovis_aries
ENSMOCG00000019914	Trmt13	99	81.042	ENSPPAG00000043736	TRMT13	100	81.651	Pan_paniscus
ENSMOCG00000019914	Trmt13	99	83.125	ENSPPRG00000003424	TRMT13	100	87.156	Panthera_pardus
ENSMOCG00000019914	Trmt13	99	83.125	ENSPTIG00000018598	TRMT13	100	87.156	Panthera_tigris_altaica
ENSMOCG00000019914	Trmt13	99	81.042	ENSPTRG00000001001	TRMT13	100	81.651	Pan_troglodytes
ENSMOCG00000019914	Trmt13	99	82.083	ENSPANG00000007598	TRMT13	100	84.404	Papio_anubis
ENSMOCG00000019914	Trmt13	97	53.503	ENSPKIG00000001514	trmt13	98	53.503	Paramormyrops_kingsleyae
ENSMOCG00000019914	Trmt13	86	65.707	ENSPSIG00000012703	TRMT13	99	65.707	Pelodiscus_sinensis
ENSMOCG00000019914	Trmt13	96	50.542	ENSPMGG00000013298	trmt13	93	50.542	Periophthalmus_magnuspinnatus
ENSMOCG00000019914	Trmt13	99	88.333	ENSPEMG00000000275	Trmt13	99	88.333	Peromyscus_maniculatus_bairdii
ENSMOCG00000019914	Trmt13	95	46.105	ENSPMAG00000000823	trmt13	97	46.105	Petromyzon_marinus
ENSMOCG00000019914	Trmt13	97	72.340	ENSPCIG00000007699	TRMT13	98	72.979	Phascolarctos_cinereus
ENSMOCG00000019914	Trmt13	98	48.837	ENSPFOG00000008675	trmt13	98	48.837	Poecilia_formosa
ENSMOCG00000019914	Trmt13	96	48.729	ENSPLAG00000009709	trmt13	99	49.049	Poecilia_latipinna
ENSMOCG00000019914	Trmt13	96	47.458	ENSPMEG00000022954	trmt13	99	47.458	Poecilia_mexicana
ENSMOCG00000019914	Trmt13	75	50.535	ENSPREG00000005645	trmt13	92	49.643	Poecilia_reticulata
ENSMOCG00000019914	Trmt13	99	81.458	ENSPPYG00000001120	TRMT13	99	81.458	Pongo_abelii
ENSMOCG00000019914	Trmt13	99	81.211	ENSPCAG00000002340	TRMT13	99	81.211	Procavia_capensis
ENSMOCG00000019914	Trmt13	99	82.917	ENSPCOG00000017984	TRMT13	100	86.239	Propithecus_coquereli
ENSMOCG00000019914	Trmt13	99	81.667	ENSPVAG00000017430	TRMT13	99	81.667	Pteropus_vampyrus
ENSMOCG00000019914	Trmt13	97	52.743	ENSPNYG00000013690	trmt13	99	52.743	Pundamilia_nyererei
ENSMOCG00000019914	Trmt13	97	55.650	ENSPNAG00000022130	trmt13	99	55.650	Pygocentrus_nattereri
ENSMOCG00000019914	Trmt13	99	87.448	ENSRNOG00000015140	Trmt13	96	87.448	Rattus_norvegicus
ENSMOCG00000019914	Trmt13	99	82.083	ENSRBIG00000037686	TRMT13	100	84.404	Rhinopithecus_bieti
ENSMOCG00000019914	Trmt13	99	82.083	ENSRROG00000044057	TRMT13	100	84.404	Rhinopithecus_roxellana
ENSMOCG00000019914	Trmt13	99	82.292	ENSSBOG00000026541	TRMT13	100	84.404	Saimiri_boliviensis_boliviensis
ENSMOCG00000019914	Trmt13	91	71.101	ENSSHAG00000005213	TRMT13	97	71.101	Sarcophilus_harrisii
ENSMOCG00000019914	Trmt13	97	54.077	ENSSFOG00015017560	trmt13	98	53.433	Scleropages_formosus
ENSMOCG00000019914	Trmt13	96	51.368	ENSSMAG00000014592	trmt13	97	51.368	Scophthalmus_maximus
ENSMOCG00000019914	Trmt13	96	50.207	ENSSDUG00000015508	trmt13	98	49.491	Seriola_dumerili
ENSMOCG00000019914	Trmt13	97	50.518	ENSSLDG00000019060	trmt13	97	50.518	Seriola_lalandi_dorsalis
ENSMOCG00000019914	Trmt13	99	70.316	ENSSARG00000010344	TRMT13	99	70.316	Sorex_araneus
ENSMOCG00000019914	Trmt13	95	66.302	ENSSPUG00000016339	TRMT13	99	66.302	Sphenodon_punctatus
ENSMOCG00000019914	Trmt13	95	53.348	ENSSPAG00000011922	trmt13	98	53.105	Stegastes_partitus
ENSMOCG00000019914	Trmt13	99	81.042	ENSSSCG00000006869	TRMT13	99	81.042	Sus_scrofa
ENSMOCG00000019914	Trmt13	95	66.812	ENSTGUG00000005253	TRMT13	98	66.812	Taeniopygia_guttata
ENSMOCG00000019914	Trmt13	97	48.847	ENSTRUG00000008400	trmt13	99	48.847	Takifugu_rubripes
ENSMOCG00000019914	Trmt13	86	66.506	ENSTBEG00000008911	TRMT13	99	66.506	Tupaia_belangeri
ENSMOCG00000019914	Trmt13	51	92.105	ENSTTRG00000015302	-	60	92.105	Tursiops_truncatus
ENSMOCG00000019914	Trmt13	99	77.755	ENSUAMG00000017251	TRMT13	99	77.755	Ursus_americanus
ENSMOCG00000019914	Trmt13	99	82.708	ENSUMAG00000007901	TRMT13	99	83.295	Ursus_maritimus
ENSMOCG00000019914	Trmt13	90	65.429	ENSVPAG00000001034	TRMT13	100	65.429	Vicugna_pacos
ENSMOCG00000019914	Trmt13	99	83.824	ENSVVUG00000021996	TRMT13	99	83.824	Vulpes_vulpes
ENSMOCG00000019914	Trmt13	98	55.437	ENSXETG00000013204	trmt13	99	55.437	Xenopus_tropicalis
ENSMOCG00000019914	Trmt13	96	48.847	ENSXMAG00000010765	trmt13	99	48.847	Xiphophorus_maculatus