EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000019985 (Gene tree)
Gene ID: 101987332
Gene Symbol: Ptcd2
Alias: 1190005P08Rik
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 28624 bases
Position: chr19:988216-1016839
Accession: 101987332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000023187	PPR	PF01535.20	7.4e-06	1	1
ENSMOCP00000023187	MRP-S27	PF10037.9	5.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000027039	-	1720	XM_005356429	ENSMOCP00000023187	381 (aa)	XP_005356486	UPI00038C548C

Gene Model

Click here to download ENSMOCG00000019985's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000019985's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000019985	Ptcd2	100	73.368	ENSG00000049883	PTCD2	100	73.399	Homo_sapiens
ENSMOCG00000019985	Ptcd2	96	46.154	ENSAPOG00000020682	ptcd2	93	46.154	Acanthochromis_polyacanthus
ENSMOCG00000019985	Ptcd2	100	72.846	ENSAMEG00000007194	PTCD2	99	72.846	Ailuropoda_melanoleuca
ENSMOCG00000019985	Ptcd2	91	43.266	ENSACIG00000002053	ptcd2	100	43.266	Amphilophus_citrinellus
ENSMOCG00000019985	Ptcd2	97	44.772	ENSAOCG00000006616	ptcd2	95	44.772	Amphiprion_ocellaris
ENSMOCG00000019985	Ptcd2	96	45.753	ENSAPEG00000022926	ptcd2	92	45.753	Amphiprion_percula
ENSMOCG00000019985	Ptcd2	93	59.605	ENSACAG00000009747	PTCD2	91	59.605	Anolis_carolinensis
ENSMOCG00000019985	Ptcd2	100	74.413	ENSANAG00000029353	PTCD2	99	74.413	Aotus_nancymaae
ENSMOCG00000019985	Ptcd2	97	44.744	ENSACLG00000027742	ptcd2	95	44.744	Astatotilapia_calliptera
ENSMOCG00000019985	Ptcd2	86	46.341	ENSAMXG00000029404	ptcd2	88	46.341	Astyanax_mexicanus
ENSMOCG00000019985	Ptcd2	100	73.438	ENSBTAG00000014675	PTCD2	100	73.438	Bos_taurus
ENSMOCG00000019985	Ptcd2	100	73.107	ENSCJAG00000016364	PTCD2	99	73.107	Callithrix_jacchus
ENSMOCG00000019985	Ptcd2	100	72.585	ENSCAFG00000007982	PTCD2	90	72.585	Canis_familiaris
ENSMOCG00000019985	Ptcd2	91	73.988	ENSCAFG00020019147	PTCD2	97	73.988	Canis_lupus_dingo
ENSMOCG00000019985	Ptcd2	100	74.740	ENSCHIG00000017118	PTCD2	100	74.740	Capra_hircus
ENSMOCG00000019985	Ptcd2	100	71.540	ENSCPOG00000040168	PTCD2	100	71.540	Cavia_porcellus
ENSMOCG00000019985	Ptcd2	100	73.368	ENSCCAG00000029389	-	99	73.368	Cebus_capucinus
ENSMOCG00000019985	Ptcd2	81	69.481	ENSCCAG00000021996	-	95	69.481	Cebus_capucinus
ENSMOCG00000019985	Ptcd2	100	73.890	ENSCATG00000019069	PTCD2	100	73.890	Cercocebus_atys
ENSMOCG00000019985	Ptcd2	97	75.202	ENSCLAG00000000072	PTCD2	97	75.202	Chinchilla_lanigera
ENSMOCG00000019985	Ptcd2	100	73.368	ENSCSAG00000015623	PTCD2	100	73.368	Chlorocebus_sabaeus
ENSMOCG00000019985	Ptcd2	91	54.310	ENSCHOG00000010634	PTCD2	100	54.310	Choloepus_hoffmanni
ENSMOCG00000019985	Ptcd2	94	55.153	ENSCPBG00000000216	PTCD2	92	55.153	Chrysemys_picta_bellii
ENSMOCG00000019985	Ptcd2	100	72.324	ENSCANG00000035636	PTCD2	99	72.324	Colobus_angolensis_palliatus
ENSMOCG00000019985	Ptcd2	100	89.239	ENSCGRG00001015289	Ptcd2	84	89.239	Cricetulus_griseus_chok1gshd
ENSMOCG00000019985	Ptcd2	100	89.239	ENSCGRG00000006193	Ptcd2	84	89.239	Cricetulus_griseus_crigri
ENSMOCG00000019985	Ptcd2	91	44.828	ENSCVAG00000001285	ptcd2	89	44.828	Cyprinodon_variegatus
ENSMOCG00000019985	Ptcd2	93	46.629	ENSDARG00000035391	ptcd2	93	46.629	Danio_rerio
ENSMOCG00000019985	Ptcd2	100	71.540	ENSDNOG00000008719	PTCD2	100	71.540	Dasypus_novemcinctus
ENSMOCG00000019985	Ptcd2	100	73.902	ENSDORG00000004921	Ptcd2	100	73.902	Dipodomys_ordii
ENSMOCG00000019985	Ptcd2	100	64.062	ENSETEG00000016542	PTCD2	99	64.062	Echinops_telfairi
ENSMOCG00000019985	Ptcd2	100	76.440	ENSEASG00005018038	PTCD2	100	76.440	Equus_asinus_asinus
ENSMOCG00000019985	Ptcd2	100	76.440	ENSECAG00000007022	PTCD2	98	76.440	Equus_caballus
ENSMOCG00000019985	Ptcd2	100	65.535	ENSEEUG00000014031	PTCD2	99	65.535	Erinaceus_europaeus
ENSMOCG00000019985	Ptcd2	93	49.153	ENSELUG00000003584	ptcd2	92	49.153	Esox_lucius
ENSMOCG00000019985	Ptcd2	96	69.315	ENSFCAG00000045432	PTCD2	78	69.315	Felis_catus
ENSMOCG00000019985	Ptcd2	86	51.682	ENSFALG00000010299	PTCD2	99	51.682	Ficedula_albicollis
ENSMOCG00000019985	Ptcd2	100	72.324	ENSFDAG00000018461	PTCD2	100	72.324	Fukomys_damarensis
ENSMOCG00000019985	Ptcd2	92	49.148	ENSGMOG00000003637	ptcd2	91	49.148	Gadus_morhua
ENSMOCG00000019985	Ptcd2	93	48.870	ENSGALG00000038260	PTCD2	93	48.870	Gallus_gallus
ENSMOCG00000019985	Ptcd2	93	59.322	ENSGAGG00000021952	PTCD2	91	59.322	Gopherus_agassizii
ENSMOCG00000019985	Ptcd2	100	73.629	ENSGGOG00000010695	PTCD2	99	73.629	Gorilla_gorilla
ENSMOCG00000019985	Ptcd2	97	44.744	ENSHBUG00000009191	ptcd2	95	44.744	Haplochromis_burtoni
ENSMOCG00000019985	Ptcd2	100	72.846	ENSHGLG00000001234	PTCD2	100	72.846	Heterocephalus_glaber_female
ENSMOCG00000019985	Ptcd2	100	72.846	ENSHGLG00100015419	PTCD2	100	72.846	Heterocephalus_glaber_male
ENSMOCG00000019985	Ptcd2	95	48.077	ENSHCOG00000001703	ptcd2	92	48.077	Hippocampus_comes
ENSMOCG00000019985	Ptcd2	88	44.776	ENSIPUG00000006080	ptcd2	91	45.272	Ictalurus_punctatus
ENSMOCG00000019985	Ptcd2	99	74.016	ENSSTOG00000006596	PTCD2	99	74.016	Ictidomys_tridecemlineatus
ENSMOCG00000019985	Ptcd2	100	76.501	ENSJJAG00000024388	Ptcd2	100	76.501	Jaculus_jaculus
ENSMOCG00000019985	Ptcd2	93	42.424	ENSKMAG00000009329	ptcd2	94	42.424	Kryptolebias_marmoratus
ENSMOCG00000019985	Ptcd2	97	45.553	ENSLBEG00000024871	ptcd2	94	45.553	Labrus_bergylta
ENSMOCG00000019985	Ptcd2	100	53.665	ENSLOCG00000011122	ptcd2	99	53.665	Lepisosteus_oculatus
ENSMOCG00000019985	Ptcd2	81	72.669	ENSLAFG00000004115	PTCD2	100	72.669	Loxodonta_africana
ENSMOCG00000019985	Ptcd2	100	73.368	ENSMFAG00000031516	PTCD2	99	73.368	Macaca_fascicularis
ENSMOCG00000019985	Ptcd2	100	73.107	ENSMNEG00000007537	PTCD2	100	73.107	Macaca_nemestrina
ENSMOCG00000019985	Ptcd2	100	74.151	ENSMLEG00000031093	PTCD2	99	74.151	Mandrillus_leucophaeus
ENSMOCG00000019985	Ptcd2	96	47.945	ENSMAMG00000018529	ptcd2	94	47.945	Mastacembelus_armatus
ENSMOCG00000019985	Ptcd2	97	44.744	ENSMZEG00005003625	ptcd2	95	44.744	Maylandia_zebra
ENSMOCG00000019985	Ptcd2	91	50.000	ENSMGAG00000005033	PTCD2	100	50.000	Meleagris_gallopavo
ENSMOCG00000019985	Ptcd2	100	71.129	ENSMAUG00000020253	Ptcd2	100	71.129	Mesocricetus_auratus
ENSMOCG00000019985	Ptcd2	100	74.935	ENSMICG00000004535	PTCD2	99	74.935	Microcebus_murinus
ENSMOCG00000019985	Ptcd2	93	56.497	ENSMODG00000001695	PTCD2	92	56.497	Monodelphis_domestica
ENSMOCG00000019985	Ptcd2	93	46.761	ENSMALG00000022372	ptcd2	93	46.761	Monopterus_albus
ENSMOCG00000019985	Ptcd2	100	82.940	MGP_CAROLIEiJ_G0018829	Ptcd2	100	82.940	Mus_caroli
ENSMOCG00000019985	Ptcd2	100	81.627	ENSMUSG00000021650	Ptcd2	100	81.627	Mus_musculus
ENSMOCG00000019985	Ptcd2	100	84.252	MGP_PahariEiJ_G0015904	Ptcd2	100	84.252	Mus_pahari
ENSMOCG00000019985	Ptcd2	100	81.890	MGP_SPRETEiJ_G0019711	Ptcd2	100	81.890	Mus_spretus
ENSMOCG00000019985	Ptcd2	97	76.550	ENSMPUG00000014401	PTCD2	97	76.550	Mustela_putorius_furo
ENSMOCG00000019985	Ptcd2	100	73.107	ENSMLUG00000007374	PTCD2	99	73.107	Myotis_lucifugus
ENSMOCG00000019985	Ptcd2	100	76.240	ENSNGAG00000005027	Ptcd2	100	76.240	Nannospalax_galili
ENSMOCG00000019985	Ptcd2	87	45.455	ENSNBRG00000000092	-	100	45.455	Neolamprologus_brichardi
ENSMOCG00000019985	Ptcd2	97	45.109	ENSNBRG00000008174	ptcd2	96	45.109	Neolamprologus_brichardi
ENSMOCG00000019985	Ptcd2	100	72.585	ENSNLEG00000004516	PTCD2	99	72.585	Nomascus_leucogenys
ENSMOCG00000019985	Ptcd2	82	49.045	ENSMEUG00000014012	-	82	49.045	Notamacropus_eugenii
ENSMOCG00000019985	Ptcd2	100	70.496	ENSOPRG00000007290	PTCD2	99	70.496	Ochotona_princeps
ENSMOCG00000019985	Ptcd2	100	72.846	ENSODEG00000016417	PTCD2	100	72.846	Octodon_degus
ENSMOCG00000019985	Ptcd2	82	46.624	ENSONIG00000011269	ptcd2	91	46.624	Oreochromis_niloticus
ENSMOCG00000019985	Ptcd2	96	73.699	ENSOCUG00000007970	PTCD2	100	73.107	Oryctolagus_cuniculus
ENSMOCG00000019985	Ptcd2	96	46.049	ENSORLG00000003851	ptcd2	92	46.049	Oryzias_latipes
ENSMOCG00000019985	Ptcd2	96	45.232	ENSORLG00020009823	ptcd2	94	45.232	Oryzias_latipes_hni
ENSMOCG00000019985	Ptcd2	92	46.286	ENSORLG00015016777	ptcd2	99	46.286	Oryzias_latipes_hsok
ENSMOCG00000019985	Ptcd2	94	44.167	ENSOMEG00000012396	ptcd2	86	44.167	Oryzias_melastigma
ENSMOCG00000019985	Ptcd2	100	71.279	ENSOGAG00000008390	PTCD2	99	71.279	Otolemur_garnettii
ENSMOCG00000019985	Ptcd2	100	74.479	ENSOARG00000005087	PTCD2	99	74.479	Ovis_aries
ENSMOCG00000019985	Ptcd2	100	73.629	ENSPPAG00000028480	PTCD2	99	73.629	Pan_paniscus
ENSMOCG00000019985	Ptcd2	100	73.368	ENSPTRG00000016968	PTCD2	99	73.368	Pan_troglodytes
ENSMOCG00000019985	Ptcd2	91	75.942	ENSPANG00000006611	PTCD2	89	75.942	Papio_anubis
ENSMOCG00000019985	Ptcd2	93	48.034	ENSPKIG00000019896	ptcd2	93	48.034	Paramormyrops_kingsleyae
ENSMOCG00000019985	Ptcd2	83	59.365	ENSPSIG00000014559	PTCD2	98	59.365	Pelodiscus_sinensis
ENSMOCG00000019985	Ptcd2	100	88.773	ENSPEMG00000000884	Ptcd2	100	88.773	Peromyscus_maniculatus_bairdii
ENSMOCG00000019985	Ptcd2	100	55.990	ENSPCIG00000029047	PTCD2	100	55.990	Phascolarctos_cinereus
ENSMOCG00000019985	Ptcd2	97	43.935	ENSPLAG00000010456	ptcd2	91	45.115	Poecilia_latipinna
ENSMOCG00000019985	Ptcd2	91	45.690	ENSPREG00000021797	ptcd2	88	45.690	Poecilia_reticulata
ENSMOCG00000019985	Ptcd2	100	64.230	ENSPPYG00000015543	PTCD2	99	64.230	Pongo_abelii
ENSMOCG00000019985	Ptcd2	76	62.847	ENSPCAG00000006806	PTCD2	92	62.847	Procavia_capensis
ENSMOCG00000019985	Ptcd2	100	70.757	ENSPVAG00000010935	PTCD2	99	70.757	Pteropus_vampyrus
ENSMOCG00000019985	Ptcd2	97	44.744	ENSPNYG00000003122	ptcd2	95	44.744	Pundamilia_nyererei
ENSMOCG00000019985	Ptcd2	95	47.802	ENSPNAG00000021490	ptcd2	94	48.077	Pygocentrus_nattereri
ENSMOCG00000019985	Ptcd2	100	83.465	ENSRNOG00000028403	Ptcd2	100	83.465	Rattus_norvegicus
ENSMOCG00000019985	Ptcd2	100	68.668	ENSRBIG00000032929	PTCD2	99	68.668	Rhinopithecus_bieti
ENSMOCG00000019985	Ptcd2	100	72.585	ENSRROG00000000080	PTCD2	100	72.585	Rhinopithecus_roxellana
ENSMOCG00000019985	Ptcd2	100	72.585	ENSSBOG00000018911	PTCD2	100	72.585	Saimiri_boliviensis_boliviensis
ENSMOCG00000019985	Ptcd2	94	58.380	ENSSHAG00000003833	PTCD2	93	58.380	Sarcophilus_harrisii
ENSMOCG00000019985	Ptcd2	92	46.154	ENSSFOG00015015415	ptcd2	91	46.154	Scleropages_formosus
ENSMOCG00000019985	Ptcd2	92	44.000	ENSSMAG00000010350	ptcd2	91	44.000	Scophthalmus_maximus
ENSMOCG00000019985	Ptcd2	96	48.626	ENSSDUG00000008142	ptcd2	89	48.626	Seriola_dumerili
ENSMOCG00000019985	Ptcd2	96	48.626	ENSSLDG00000015284	ptcd2	93	48.626	Seriola_lalandi_dorsalis
ENSMOCG00000019985	Ptcd2	81	62.136	ENSSARG00000004983	PTCD2	99	62.136	Sorex_araneus
ENSMOCG00000019985	Ptcd2	93	52.528	ENSSPUG00000000176	PTCD2	90	52.528	Sphenodon_punctatus
ENSMOCG00000019985	Ptcd2	93	46.832	ENSSPAG00000008591	ptcd2	93	46.832	Stegastes_partitus
ENSMOCG00000019985	Ptcd2	100	74.541	ENSSSCG00000016975	PTCD2	90	74.541	Sus_scrofa
ENSMOCG00000019985	Ptcd2	91	51.594	ENSTGUG00000005705	PTCD2	99	51.594	Taeniopygia_guttata
ENSMOCG00000019985	Ptcd2	100	71.540	ENSTBEG00000016559	PTCD2	99	71.540	Tupaia_belangeri
ENSMOCG00000019985	Ptcd2	100	73.177	ENSTTRG00000011851	PTCD2	99	73.177	Tursiops_truncatus
ENSMOCG00000019985	Ptcd2	97	73.854	ENSUAMG00000007583	PTCD2	87	73.854	Ursus_americanus
ENSMOCG00000019985	Ptcd2	97	73.585	ENSUMAG00000007666	PTCD2	97	73.585	Ursus_maritimus
ENSMOCG00000019985	Ptcd2	100	71.875	ENSVPAG00000009597	PTCD2	99	71.875	Vicugna_pacos
ENSMOCG00000019985	Ptcd2	100	72.585	ENSVVUG00000007299	-	100	72.585	Vulpes_vulpes
ENSMOCG00000019985	Ptcd2	92	53.561	ENSXETG00000031652	PTCD2	92	53.561	Xenopus_tropicalis
ENSMOCG00000019985	Ptcd2	91	45.402	ENSXMAG00000005940	ptcd2	82	45.402	Xiphophorus_maculatus