EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000020035 (Gene tree)
Gene ID: 101980926
Gene Symbol: Rad54b
Alias: E130016E03Rik
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 63735 bases
Position: chrLG5:60984625-61048359
Accession: 101980926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000023263	ResIII	PF04851.15	9.2e-11	1	1
ENSMOCP00000023259	ResIII	PF04851.15	9.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000027115	-	2664	-	ENSMOCP00000023263	887 (aa)	-	-
ENSMOCT00000027111	-	2759	XM_005362397	ENSMOCP00000023259	890 (aa)	XP_005362454	UPI00038C5324

Gene Model

Click here to download ENSMOCG00000020035's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000020035's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000020035	Rad54b	73	44.745	ENSMOCG00000001778	Rad54l	84	44.595
ENSMOCG00000020035	Rad54b	56	30.118	ENSMOCG00000006305	Chd1l	50	30.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000020035	Rad54b	99	77.692	ENSG00000197275	RAD54B	99	77.692	Homo_sapiens
ENSMOCG00000020035	Rad54b	81	81.655	ENSG00000265817	FSBP	99	81.655	Homo_sapiens
ENSMOCG00000020035	Rad54b	99	77.571	ENSAMEG00000005834	-	100	77.571	Ailuropoda_melanoleuca
ENSMOCG00000020035	Rad54b	99	55.111	ENSACIG00000013005	rad54b	99	55.111	Amphilophus_citrinellus
ENSMOCG00000020035	Rad54b	99	53.526	ENSAOCG00000008523	rad54b	99	53.706	Amphiprion_ocellaris
ENSMOCG00000020035	Rad54b	99	54.097	ENSAPEG00000001673	rad54b	99	54.321	Amphiprion_percula
ENSMOCG00000020035	Rad54b	99	54.292	ENSATEG00000001527	rad54b	99	54.292	Anabas_testudineus
ENSMOCG00000020035	Rad54b	100	65.832	ENSAPLG00000014366	-	100	65.832	Anas_platyrhynchos
ENSMOCG00000020035	Rad54b	89	68.080	ENSACAG00000003671	-	99	67.955	Anolis_carolinensis
ENSMOCG00000020035	Rad54b	73	80.247	ENSANAG00000019528	-	99	80.431	Aotus_nancymaae
ENSMOCG00000020035	Rad54b	99	54.972	ENSACLG00000007826	rad54b	99	55.084	Astatotilapia_calliptera
ENSMOCG00000020035	Rad54b	87	57.398	ENSAMXG00000039985	rad54b	94	56.981	Astyanax_mexicanus
ENSMOCG00000020035	Rad54b	99	74.890	ENSBTAG00000000632	RAD54B	100	74.890	Bos_taurus
ENSMOCG00000020035	Rad54b	81	35.349	WBGene00013792	Y116A8C.13	84	35.436	Caenorhabditis_elegans
ENSMOCG00000020035	Rad54b	99	76.923	ENSCJAG00000000080	-	99	80.690	Callithrix_jacchus
ENSMOCG00000020035	Rad54b	99	76.039	ENSCAFG00000009179	RAD54B	99	76.039	Canis_familiaris
ENSMOCG00000020035	Rad54b	99	75.930	ENSCAFG00020012084	-	99	75.930	Canis_lupus_dingo
ENSMOCG00000020035	Rad54b	99	74.918	ENSCHIG00000008230	-	100	74.918	Capra_hircus
ENSMOCG00000020035	Rad54b	99	78.337	ENSTSYG00000013234	-	100	78.337	Carlito_syrichta
ENSMOCG00000020035	Rad54b	100	76.940	ENSCPOG00000011643	-	100	76.940	Cavia_porcellus
ENSMOCG00000020035	Rad54b	99	77.193	ENSCCAG00000011754	-	99	80.579	Cebus_capucinus
ENSMOCG00000020035	Rad54b	99	77.582	ENSCATG00000030661	-	99	81.103	Cercocebus_atys
ENSMOCG00000020035	Rad54b	99	78.965	ENSCLAG00000010476	-	99	78.965	Chinchilla_lanigera
ENSMOCG00000020035	Rad54b	99	77.692	ENSCSAG00000012712	-	99	77.473	Chlorocebus_sabaeus
ENSMOCG00000020035	Rad54b	99	66.015	ENSCPBG00000003204	-	99	66.745	Chrysemys_picta_bellii
ENSMOCG00000020035	Rad54b	99	77.912	ENSCANG00000017939	-	99	81.241	Colobus_angolensis_palliatus
ENSMOCG00000020035	Rad54b	99	87.093	ENSCGRG00001020184	Rad54b	100	86.869	Cricetulus_griseus_chok1gshd
ENSMOCG00000020035	Rad54b	99	85.189	ENSCGRG00000016752	Rad54b	100	84.967	Cricetulus_griseus_crigri
ENSMOCG00000020035	Rad54b	99	54.241	ENSCSEG00000001601	rad54b	99	54.241	Cynoglossus_semilaevis
ENSMOCG00000020035	Rad54b	99	56.682	ENSCVAG00000009200	rad54b	99	56.604	Cyprinodon_variegatus
ENSMOCG00000020035	Rad54b	99	52.586	ENSDARG00000092134	rad54b	100	59.816	Danio_rerio
ENSMOCG00000020035	Rad54b	99	73.304	ENSDNOG00000015535	-	99	73.304	Dasypus_novemcinctus
ENSMOCG00000020035	Rad54b	99	78.139	ENSDORG00000002492	Rad54b	100	78.363	Dipodomys_ordii
ENSMOCG00000020035	Rad54b	86	75.255	ENSETEG00000010605	-	100	75.255	Echinops_telfairi
ENSMOCG00000020035	Rad54b	88	50.374	ENSEBUG00000009104	rad54b	99	46.888	Eptatretus_burgeri
ENSMOCG00000020035	Rad54b	97	75.764	ENSEASG00005004021	-	99	75.764	Equus_asinus_asinus
ENSMOCG00000020035	Rad54b	99	76.290	ENSECAG00000021949	-	100	75.818	Equus_caballus
ENSMOCG00000020035	Rad54b	81	75.776	ENSEEUG00000008056	-	80	75.776	Erinaceus_europaeus
ENSMOCG00000020035	Rad54b	99	52.778	ENSELUG00000009287	rad54b	99	52.885	Esox_lucius
ENSMOCG00000020035	Rad54b	99	77.352	ENSFCAG00000015513	-	100	81.319	Felis_catus
ENSMOCG00000020035	Rad54b	99	65.132	ENSFALG00000005467	-	99	65.132	Ficedula_albicollis
ENSMOCG00000020035	Rad54b	99	77.974	ENSFDAG00000020541	-	99	77.974	Fukomys_damarensis
ENSMOCG00000020035	Rad54b	88	58.060	ENSFHEG00000014382	rad54b	87	58.166	Fundulus_heteroclitus
ENSMOCG00000020035	Rad54b	88	55.945	ENSGMOG00000014774	rad54b	98	55.695	Gadus_morhua
ENSMOCG00000020035	Rad54b	100	64.744	ENSGALG00000043597	RAD54B	100	64.744	Gallus_gallus
ENSMOCG00000020035	Rad54b	100	55.506	ENSGAFG00000007901	rad54b	100	55.432	Gambusia_affinis
ENSMOCG00000020035	Rad54b	99	52.897	ENSGACG00000009128	rad54b	100	52.796	Gasterosteus_aculeatus
ENSMOCG00000020035	Rad54b	99	66.124	ENSGAGG00000018747	-	99	66.124	Gopherus_agassizii
ENSMOCG00000020035	Rad54b	99	77.437	ENSGGOG00000023516	-	100	77.437	Gorilla_gorilla
ENSMOCG00000020035	Rad54b	99	52.840	ENSHBUG00000016017	rad54b	99	52.840	Haplochromis_burtoni
ENSMOCG00000020035	Rad54b	99	76.445	ENSHGLG00000008263	RAD54B	99	76.336	Heterocephalus_glaber_female
ENSMOCG00000020035	Rad54b	99	75.623	ENSHGLG00100008108	-	99	75.515	Heterocephalus_glaber_male
ENSMOCG00000020035	Rad54b	99	53.311	ENSHCOG00000004764	rad54b	98	55.062	Hippocampus_comes
ENSMOCG00000020035	Rad54b	99	52.321	ENSIPUG00000018531	rad54b	99	52.321	Ictalurus_punctatus
ENSMOCG00000020035	Rad54b	99	77.691	ENSSTOG00000010791	-	99	77.691	Ictidomys_tridecemlineatus
ENSMOCG00000020035	Rad54b	99	78.485	ENSJJAG00000010314	Rad54b	100	78.266	Jaculus_jaculus
ENSMOCG00000020035	Rad54b	99	54.190	ENSKMAG00000004744	rad54b	99	54.078	Kryptolebias_marmoratus
ENSMOCG00000020035	Rad54b	83	68.139	ENSLACG00000000859	-	100	68.005	Latimeria_chalumnae
ENSMOCG00000020035	Rad54b	99	57.389	ENSLOCG00000010100	rad54b	93	63.854	Lepisosteus_oculatus
ENSMOCG00000020035	Rad54b	91	78.245	ENSLAFG00000015315	-	100	78.245	Loxodonta_africana
ENSMOCG00000020035	Rad54b	99	77.692	ENSMFAG00000031629	-	99	81.103	Macaca_fascicularis
ENSMOCG00000020035	Rad54b	99	77.692	ENSMMUG00000005659	-	99	77.473	Macaca_mulatta
ENSMOCG00000020035	Rad54b	99	77.778	ENSMNEG00000016408	-	99	77.558	Macaca_nemestrina
ENSMOCG00000020035	Rad54b	99	77.692	ENSMLEG00000006946	-	99	77.473	Mandrillus_leucophaeus
ENSMOCG00000020035	Rad54b	99	55.072	ENSMAMG00000012269	rad54b	99	55.072	Mastacembelus_armatus
ENSMOCG00000020035	Rad54b	99	52.840	ENSMZEG00005005281	rad54b	95	58.913	Maylandia_zebra
ENSMOCG00000020035	Rad54b	100	64.527	ENSMGAG00000012024	-	100	64.527	Meleagris_gallopavo
ENSMOCG00000020035	Rad54b	99	86.644	ENSMAUG00000013586	Rad54b	100	86.420	Mesocricetus_auratus
ENSMOCG00000020035	Rad54b	99	77.441	ENSMICG00000000754	-	99	77.441	Microcebus_murinus
ENSMOCG00000020035	Rad54b	99	54.153	ENSMMOG00000003394	rad54b	99	54.102	Mola_mola
ENSMOCG00000020035	Rad54b	90	74.845	ENSMODG00000007343	-	99	74.845	Monodelphis_domestica
ENSMOCG00000020035	Rad54b	72	59.190	ENSMALG00000001520	rad54b	99	59.034	Monopterus_albus
ENSMOCG00000020035	Rad54b	99	85.746	MGP_CAROLIEiJ_G0025810	Rad54b	100	85.746	Mus_caroli
ENSMOCG00000020035	Rad54b	99	85.410	ENSMUSG00000078773	Rad54b	100	85.410	Mus_musculus
ENSMOCG00000020035	Rad54b	99	85.297	MGP_PahariEiJ_G0023933	Rad54b	100	85.297	Mus_pahari
ENSMOCG00000020035	Rad54b	99	85.522	MGP_SPRETEiJ_G0026758	Rad54b	100	85.522	Mus_spretus
ENSMOCG00000020035	Rad54b	91	79.433	ENSMPUG00000008878	-	100	79.433	Mustela_putorius_furo
ENSMOCG00000020035	Rad54b	99	75.274	ENSMLUG00000008953	-	100	75.274	Myotis_lucifugus
ENSMOCG00000020035	Rad54b	99	81.929	ENSNGAG00000017537	Rad54b	100	81.929	Nannospalax_galili
ENSMOCG00000020035	Rad54b	99	55.419	ENSNBRG00000013394	rad54b	99	55.419	Neolamprologus_brichardi
ENSMOCG00000020035	Rad54b	100	77.571	ENSNLEG00000003062	-	100	81.070	Nomascus_leucogenys
ENSMOCG00000020035	Rad54b	73	69.900	ENSMEUG00000012426	-	71	69.900	Notamacropus_eugenii
ENSMOCG00000020035	Rad54b	90	72.333	ENSODEG00000002650	-	95	79.661	Octodon_degus
ENSMOCG00000020035	Rad54b	99	75.385	ENSODEG00000019564	-	100	75.385	Octodon_degus
ENSMOCG00000020035	Rad54b	99	53.821	ENSONIG00000006067	rad54b	99	53.821	Oreochromis_niloticus
ENSMOCG00000020035	Rad54b	84	71.751	ENSOANG00000011348	-	100	71.751	Ornithorhynchus_anatinus
ENSMOCG00000020035	Rad54b	100	76.451	ENSOCUG00000016478	-	100	76.451	Oryctolagus_cuniculus
ENSMOCG00000020035	Rad54b	99	52.681	ENSORLG00000008918	rad54b	99	61.395	Oryzias_latipes
ENSMOCG00000020035	Rad54b	72	61.455	ENSORLG00020012171	rad54b	99	61.395	Oryzias_latipes_hni
ENSMOCG00000020035	Rad54b	99	53.191	ENSORLG00015018536	rad54b	99	53.191	Oryzias_latipes_hsok
ENSMOCG00000020035	Rad54b	86	58.634	ENSOMEG00000004345	rad54b	99	58.634	Oryzias_melastigma
ENSMOCG00000020035	Rad54b	99	76.180	ENSOGAG00000007854	-	99	76.180	Otolemur_garnettii
ENSMOCG00000020035	Rad54b	91	78.229	ENSOARG00000007691	-	100	78.229	Ovis_aries
ENSMOCG00000020035	Rad54b	99	76.044	ENSPPAG00000029572	-	99	76.044	Pan_paniscus
ENSMOCG00000020035	Rad54b	99	77.681	ENSPPRG00000007571	-	100	81.456	Panthera_pardus
ENSMOCG00000020035	Rad54b	81	81.319	ENSPTIG00000012670	-	100	81.319	Panthera_tigris_altaica
ENSMOCG00000020035	Rad54b	99	77.473	ENSPTRG00000020427	-	99	81.517	Pan_troglodytes
ENSMOCG00000020035	Rad54b	99	77.802	ENSPANG00000019566	-	99	77.582	Papio_anubis
ENSMOCG00000020035	Rad54b	99	56.880	ENSPKIG00000014974	rad54b	99	56.616	Paramormyrops_kingsleyae
ENSMOCG00000020035	Rad54b	99	64.161	ENSPSIG00000002383	-	98	68.657	Pelodiscus_sinensis
ENSMOCG00000020035	Rad54b	99	87.879	ENSPEMG00000012133	Rad54b	100	87.879	Peromyscus_maniculatus_bairdii
ENSMOCG00000020035	Rad54b	88	57.538	ENSPMAG00000002916	rad54b	98	57.842	Petromyzon_marinus
ENSMOCG00000020035	Rad54b	91	74.536	ENSPCIG00000020151	-	94	74.657	Phascolarctos_cinereus
ENSMOCG00000020035	Rad54b	100	53.805	ENSPFOG00000023411	rad54b	100	53.805	Poecilia_formosa
ENSMOCG00000020035	Rad54b	100	54.017	ENSPLAG00000010430	rad54b	100	54.017	Poecilia_latipinna
ENSMOCG00000020035	Rad54b	100	55.307	ENSPMEG00000016873	rad54b	100	55.234	Poecilia_mexicana
ENSMOCG00000020035	Rad54b	100	55.679	ENSPREG00000018443	rad54b	100	55.791	Poecilia_reticulata
ENSMOCG00000020035	Rad54b	99	77.338	ENSPPYG00000018750	-	99	77.338	Pongo_abelii
ENSMOCG00000020035	Rad54b	99	78.375	ENSPCOG00000026845	-	99	81.818	Propithecus_coquereli
ENSMOCG00000020035	Rad54b	83	80.485	ENSPVAG00000000261	-	86	80.485	Pteropus_vampyrus
ENSMOCG00000020035	Rad54b	88	58.712	ENSPNYG00000018303	rad54b	96	58.712	Pundamilia_nyererei
ENSMOCG00000020035	Rad54b	99	53.493	ENSPNAG00000000295	rad54b	99	53.166	Pygocentrus_nattereri
ENSMOCG00000020035	Rad54b	99	83.389	ENSRNOG00000039949	Rad54b	100	83.389	Rattus_norvegicus
ENSMOCG00000020035	Rad54b	99	77.253	ENSRBIG00000020419	-	99	77.033	Rhinopithecus_bieti
ENSMOCG00000020035	Rad54b	99	77.253	ENSRROG00000039897	-	99	77.033	Rhinopithecus_roxellana
ENSMOCG00000020035	Rad54b	80	36.306	YBR073W	RDH54	78	36.585	Saccharomyces_cerevisiae
ENSMOCG00000020035	Rad54b	99	76.670	ENSSBOG00000028501	-	100	76.670	Saimiri_boliviensis_boliviensis
ENSMOCG00000020035	Rad54b	99	69.408	ENSSHAG00000017038	-	99	69.408	Sarcophilus_harrisii
ENSMOCG00000020035	Rad54b	67	63.880	ENSSFOG00015008483	rad54b	92	63.880	Scleropages_formosus
ENSMOCG00000020035	Rad54b	99	54.433	ENSSMAG00000018659	rad54b	99	54.545	Scophthalmus_maximus
ENSMOCG00000020035	Rad54b	87	59.566	ENSSDUG00000001122	rad54b	82	59.694	Seriola_dumerili
ENSMOCG00000020035	Rad54b	99	52.174	ENSSLDG00000013787	rad54b	99	52.174	Seriola_lalandi_dorsalis
ENSMOCG00000020035	Rad54b	100	65.552	ENSSPUG00000016497	-	100	65.552	Sphenodon_punctatus
ENSMOCG00000020035	Rad54b	99	55.111	ENSSPAG00000012800	rad54b	99	55.222	Stegastes_partitus
ENSMOCG00000020035	Rad54b	99	76.659	ENSSSCG00000006101	-	99	80.976	Sus_scrofa
ENSMOCG00000020035	Rad54b	99	64.333	ENSTGUG00000011880	-	99	64.333	Taeniopygia_guttata
ENSMOCG00000020035	Rad54b	88	59.264	ENSTRUG00000010015	rad54b	99	52.842	Takifugu_rubripes
ENSMOCG00000020035	Rad54b	99	73.823	ENSTTRG00000006312	-	100	73.823	Tursiops_truncatus
ENSMOCG00000020035	Rad54b	99	76.805	ENSUMAG00000016401	-	100	76.805	Ursus_maritimus
ENSMOCG00000020035	Rad54b	99	75.192	ENSVPAG00000003157	-	100	75.192	Vicugna_pacos
ENSMOCG00000020035	Rad54b	99	53.084	ENSXETG00000025924	rad54b	99	57.591	Xenopus_tropicalis
ENSMOCG00000020035	Rad54b	100	55.729	ENSXMAG00000013141	rad54b	100	55.654	Xiphophorus_maculatus