EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMOCG00000020067 (Gene tree)
Gene ID
101993099
Gene Symbol
Cpsf3
Alias
73 kDa
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Microtus_ochrogaster
Status
putative
Strand
Plus strand
Length
30859 bases
Position
chrJH996440.1:2894105-2924963
Accession
101993099
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMOCP00000023311CPSF73-100_CPF11718.82.7e-4111
ENSMOCP00000023311Beta-CaspPF10996.82.8e-3311
ENSMOCP00000023311Lactamase_BPF00753.271e-1811
ENSMOCP00000023311RMMBLPF07521.121.3e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMOCT00000027165-1956XM_013353533ENSMOCP00000023311651 (aa)XP_013208987-
Gene Model
Click here to download ENSMOCG00000020067's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000020067's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMOCG00000020067Cpsf36939.780ENSMOCG00000021304Ints117439.780
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMOCG00000020067Cpsf310094.152ENSG00000119203CPSF3100100.000Homo_sapiens
ENSMOCG00000020067Cpsf37796.593ENSAPOG00000012241CPSF39096.579Acanthochromis_polyacanthus
ENSMOCG00000020067Cpsf39982.963ENSAPOG00000022087cpsf39882.963Acanthochromis_polyacanthus
ENSMOCG00000020067Cpsf310094.298ENSAMEG00000008493CPSF310094.298Ailuropoda_melanoleuca
ENSMOCG00000020067Cpsf39183.175ENSACIG00000023663CPSF39983.175Amphilophus_citrinellus
ENSMOCG00000020067Cpsf39180.096ENSACIG00000009846cpsf39980.096Amphilophus_citrinellus
ENSMOCG00000020067Cpsf39985.000ENSAOCG00000010077CPSF39984.967Amphiprion_ocellaris
ENSMOCG00000020067Cpsf39985.604ENSAOCG00000022056cpsf39885.604Amphiprion_ocellaris
ENSMOCG00000020067Cpsf39587.987ENSAPEG00000019526cpsf39883.111Amphiprion_percula
ENSMOCG00000020067Cpsf39490.732ENSAPEG00000021167CPSF39885.000Amphiprion_percula
ENSMOCG00000020067Cpsf39982.570ENSATEG00000003959cpsf39982.570Anabas_testudineus
ENSMOCG00000020067Cpsf39982.883ENSATEG00000014525CPSF39882.883Anabas_testudineus
ENSMOCG00000020067Cpsf39890.923ENSAPLG00000006941CPSF39890.923Anas_platyrhynchos
ENSMOCG00000020067Cpsf39288.031ENSACAG00000001759CPSF39988.031Anolis_carolinensis
ENSMOCG00000020067Cpsf310087.719ENSANAG00000031254CPSF310087.719Aotus_nancymaae
ENSMOCG00000020067Cpsf39183.016ENSACLG00000018846CPSF39983.016Astatotilapia_calliptera
ENSMOCG00000020067Cpsf39782.256ENSACLG00000014484cpsf39982.256Astatotilapia_calliptera
ENSMOCG00000020067Cpsf39984.118ENSAMXG00000004786cpsf39983.225Astyanax_mexicanus
ENSMOCG00000020067Cpsf310094.298ENSBTAG00000019735CPSF310094.298Bos_taurus
ENSMOCG00000020067Cpsf39061.231WBGene00013460cpsf-38561.231Caenorhabditis_elegans
ENSMOCG00000020067Cpsf310094.298ENSCJAG00000006276CPSF310094.298Callithrix_jacchus
ENSMOCG00000020067Cpsf310094.298ENSCAFG00000003375CPSF39594.298Canis_familiaris
ENSMOCG00000020067Cpsf39599.191ENSCAFG00020026799CPSF39999.191Canis_lupus_dingo
ENSMOCG00000020067Cpsf310094.298ENSCHIG00000013973CPSF310094.298Capra_hircus
ENSMOCG00000020067Cpsf310094.152ENSTSYG00000002967CPSF310094.152Carlito_syrichta
ENSMOCG00000020067Cpsf39792.954ENSCAPG00000013851CPSF310092.954Cavia_aperea
ENSMOCG00000020067Cpsf310093.129ENSCPOG00000011299CPSF310093.129Cavia_porcellus
ENSMOCG00000020067Cpsf310094.298ENSCCAG00000036730CPSF310094.298Cebus_capucinus
ENSMOCG00000020067Cpsf310091.679ENSCATG00000014770CPSF39999.484Cercocebus_atys
ENSMOCG00000020067Cpsf310092.836ENSCLAG00000002727CPSF310092.836Chinchilla_lanigera
ENSMOCG00000020067Cpsf310086.842ENSCSAG00000007125CPSF310086.842Chlorocebus_sabaeus
ENSMOCG00000020067Cpsf386100.000ENSCHOG00000000180CPSF38571.579Choloepus_hoffmanni
ENSMOCG00000020067Cpsf39990.909ENSCPBG00000014074CPSF39990.909Chrysemys_picta_bellii
ENSMOCG00000020067Cpsf39966.325ENSCING00000007214-9866.325Ciona_intestinalis
ENSMOCG00000020067Cpsf310083.707ENSCANG00000034435CPSF310083.707Colobus_angolensis_palliatus
ENSMOCG00000020067Cpsf310094.591ENSCGRG00001013134Cpsf310094.591Cricetulus_griseus_chok1gshd
ENSMOCG00000020067Cpsf310094.591ENSCGRG00000018319Cpsf310094.591Cricetulus_griseus_crigri
ENSMOCG00000020067Cpsf39983.554ENSCSEG00000002021CPSF39983.153Cynoglossus_semilaevis
ENSMOCG00000020067Cpsf39985.000ENSCVAG00000015067CPSF39885.000Cyprinodon_variegatus
ENSMOCG00000020067Cpsf39985.294ENSDARG00000027649cpsf39885.294Danio_rerio
ENSMOCG00000020067Cpsf310092.555ENSDNOG00000008940CPSF39592.555Dasypus_novemcinctus
ENSMOCG00000020067Cpsf39599.029ENSDORG00000014263Cpsf39599.029Dipodomys_ordii
ENSMOCG00000020067Cpsf39964.697FBgn0261065Cpsf739864.697Drosophila_melanogaster
ENSMOCG00000020067Cpsf39585.437ENSETEG00000003893CPSF39585.437Echinops_telfairi
ENSMOCG00000020067Cpsf39187.162ENSEBUG00000009018cpsf39877.077Eptatretus_burgeri
ENSMOCG00000020067Cpsf310094.298ENSEASG00005003970CPSF310094.298Equus_asinus_asinus
ENSMOCG00000020067Cpsf310094.298ENSECAG00000019911CPSF39898.669Equus_caballus
ENSMOCG00000020067Cpsf310079.240ENSEEUG00000015422CPSF310079.240Erinaceus_europaeus
ENSMOCG00000020067Cpsf39984.412ENSELUG00000013775cpsf39884.412Esox_lucius
ENSMOCG00000020067Cpsf310094.298ENSFCAG00000007852CPSF310094.298Felis_catus
ENSMOCG00000020067Cpsf39490.572ENSFALG00000006572CPSF310090.572Ficedula_albicollis
ENSMOCG00000020067Cpsf39992.669ENSFDAG00000006317CPSF39992.669Fukomys_damarensis
ENSMOCG00000020067Cpsf39981.738ENSFHEG00000014774cpsf39881.738Fundulus_heteroclitus
ENSMOCG00000020067Cpsf35764.390ENSFHEG00000012186CPSF39964.390Fundulus_heteroclitus
ENSMOCG00000020067Cpsf39983.529ENSGMOG00000003157cpsf39983.529Gadus_morhua
ENSMOCG00000020067Cpsf39990.602ENSGALG00000016424CPSF39990.602Gallus_gallus
ENSMOCG00000020067Cpsf39179.840ENSGAFG00000019449cpsf39979.840Gambusia_affinis
ENSMOCG00000020067Cpsf39984.683ENSGAFG00000008016CPSF39884.683Gambusia_affinis
ENSMOCG00000020067Cpsf36787.152ENSGAGG00000025583CPSF39387.152Gopherus_agassizii
ENSMOCG00000020067Cpsf310091.989ENSGGOG00000001757CPSF310093.858Gorilla_gorilla
ENSMOCG00000020067Cpsf39982.232ENSHBUG00000001188cpsf39982.232Haplochromis_burtoni
ENSMOCG00000020067Cpsf35776.658ENSHBUG00000014332CPSF39976.658Haplochromis_burtoni
ENSMOCG00000020067Cpsf310092.690ENSHGLG00000000666CPSF39992.690Heterocephalus_glaber_female
ENSMOCG00000020067Cpsf310092.690ENSHGLG00100007765CPSF39992.690Heterocephalus_glaber_male
ENSMOCG00000020067Cpsf39983.235ENSHCOG00000015957CPSF39783.235Hippocampus_comes
ENSMOCG00000020067Cpsf39982.448ENSHCOG00000007251cpsf39982.448Hippocampus_comes
ENSMOCG00000020067Cpsf39488.293ENSIPUG00000023488cpsf39883.088Ictalurus_punctatus
ENSMOCG00000020067Cpsf310094.298ENSSTOG00000004476CPSF310094.298Ictidomys_tridecemlineatus
ENSMOCG00000020067Cpsf310093.567ENSJJAG00000023415Cpsf310093.567Jaculus_jaculus
ENSMOCG00000020067Cpsf39985.000ENSKMAG00000007317CPSF39885.000Kryptolebias_marmoratus
ENSMOCG00000020067Cpsf39981.805ENSKMAG00000002806cpsf39881.805Kryptolebias_marmoratus
ENSMOCG00000020067Cpsf35281.176ENSLBEG00000015018-9081.176Labrus_bergylta
ENSMOCG00000020067Cpsf39490.569ENSLBEG00000013492CPSF39390.569Labrus_bergylta
ENSMOCG00000020067Cpsf39982.071ENSLBEG00000020569cpsf39482.071Labrus_bergylta
ENSMOCG00000020067Cpsf39980.707ENSLACG00000008308CPSF39880.707Latimeria_chalumnae
ENSMOCG00000020067Cpsf39985.756ENSLOCG00000016823cpsf39885.756Lepisosteus_oculatus
ENSMOCG00000020067Cpsf39992.500ENSLAFG00000009467CPSF310092.500Loxodonta_africana
ENSMOCG00000020067Cpsf310094.298ENSMFAG00000001339CPSF310094.298Macaca_fascicularis
ENSMOCG00000020067Cpsf39199.496ENSMMUG00000018038CPSF310093.972Macaca_mulatta
ENSMOCG00000020067Cpsf310081.579ENSMNEG00000039447CPSF310081.579Macaca_nemestrina
ENSMOCG00000020067Cpsf310094.298ENSMLEG00000026825CPSF310094.298Mandrillus_leucophaeus
ENSMOCG00000020067Cpsf39182.278ENSMAMG00000008835CPSF39982.278Mastacembelus_armatus
ENSMOCG00000020067Cpsf39983.111ENSMAMG00000003076cpsf39884.202Mastacembelus_armatus
ENSMOCG00000020067Cpsf39985.441ENSMZEG00005006258CPSF39885.441Maylandia_zebra
ENSMOCG00000020067Cpsf39982.232ENSMZEG00005014358cpsf39982.232Maylandia_zebra
ENSMOCG00000020067Cpsf39790.555ENSMGAG00000013995CPSF310090.555Meleagris_gallopavo
ENSMOCG00000020067Cpsf35389.362ENSMAUG00000000166Cpsf310089.362Mesocricetus_auratus
ENSMOCG00000020067Cpsf310088.743ENSMICG00000002363CPSF310088.743Microcebus_murinus
ENSMOCG00000020067Cpsf37871.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSMOCG00000020067Cpsf39481.340ENSMMOG00000018212CPSF39881.340Mola_mola
ENSMOCG00000020067Cpsf310091.606ENSMODG00000014703CPSF310091.606Monodelphis_domestica
ENSMOCG00000020067Cpsf39982.845ENSMALG00000016416cpsf39982.845Monopterus_albus
ENSMOCG00000020067Cpsf39285.390ENSMALG00000011474CPSF39985.390Monopterus_albus
ENSMOCG00000020067Cpsf310094.298MGP_CAROLIEiJ_G0017640Cpsf310094.298Mus_caroli
ENSMOCG00000020067Cpsf310094.298ENSMUSG00000054309Cpsf396100.000Mus_musculus
ENSMOCG00000020067Cpsf310094.152MGP_PahariEiJ_G0029397Cpsf310094.152Mus_pahari
ENSMOCG00000020067Cpsf310094.298MGP_SPRETEiJ_G0018481Cpsf310094.298Mus_spretus
ENSMOCG00000020067Cpsf310093.567ENSMPUG00000013213CPSF310093.567Mustela_putorius_furo
ENSMOCG00000020067Cpsf310093.723ENSMLUG00000010636CPSF310093.723Myotis_lucifugus
ENSMOCG00000020067Cpsf310094.591ENSNGAG00000019836Cpsf310094.591Nannospalax_galili
ENSMOCG00000020067Cpsf39183.016ENSNBRG00000010525CPSF39983.016Neolamprologus_brichardi
ENSMOCG00000020067Cpsf39981.938ENSNBRG00000004770cpsf39981.938Neolamprologus_brichardi
ENSMOCG00000020067Cpsf310094.298ENSNLEG00000013359CPSF310094.298Nomascus_leucogenys
ENSMOCG00000020067Cpsf310064.912ENSMEUG00000013117-10064.912Notamacropus_eugenii
ENSMOCG00000020067Cpsf310084.795ENSOPRG00000008902CPSF310084.795Ochotona_princeps
ENSMOCG00000020067Cpsf310092.544ENSODEG00000003129CPSF310092.544Octodon_degus
ENSMOCG00000020067Cpsf39982.718ENSONIG00000018812cpsf39982.718Oreochromis_niloticus
ENSMOCG00000020067Cpsf38290.780ENSOANG00000008577CPSF310090.780Ornithorhynchus_anatinus
ENSMOCG00000020067Cpsf310094.152ENSOCUG00000003728CPSF310094.152Oryctolagus_cuniculus
ENSMOCG00000020067Cpsf39980.764ENSORLG00000018854cpsf39980.764Oryzias_latipes
ENSMOCG00000020067Cpsf39980.764ENSORLG00020013331cpsf39980.764Oryzias_latipes_hni
ENSMOCG00000020067Cpsf39980.764ENSORLG00015011017cpsf39980.764Oryzias_latipes_hsok
ENSMOCG00000020067Cpsf39981.204ENSOMEG00000010647cpsf39481.204Oryzias_melastigma
ENSMOCG00000020067Cpsf310084.357ENSOGAG00000001680CPSF310084.357Otolemur_garnettii
ENSMOCG00000020067Cpsf310094.298ENSOARG00000015073CPSF310094.298Ovis_aries
ENSMOCG00000020067Cpsf310094.298ENSPPAG00000042457CPSF310094.298Pan_paniscus
ENSMOCG00000020067Cpsf310094.006ENSPPRG00000016790CPSF310094.006Panthera_pardus
ENSMOCG00000020067Cpsf39993.971ENSPTIG00000003920CPSF310093.543Panthera_tigris_altaica
ENSMOCG00000020067Cpsf310094.298ENSPTRG00000011638CPSF310094.298Pan_troglodytes
ENSMOCG00000020067Cpsf310094.298ENSPANG00000016798CPSF310094.298Papio_anubis
ENSMOCG00000020067Cpsf39985.294ENSPKIG00000023646cpsf39984.806Paramormyrops_kingsleyae
ENSMOCG00000020067Cpsf39989.312ENSPSIG00000016144CPSF310089.312Pelodiscus_sinensis
ENSMOCG00000020067Cpsf35775.062ENSPMGG00000015311CPSF39975.062Periophthalmus_magnuspinnatus
ENSMOCG00000020067Cpsf39183.054ENSPMGG00000006141-9983.054Periophthalmus_magnuspinnatus
ENSMOCG00000020067Cpsf310094.006ENSPEMG00000017668Cpsf310094.006Peromyscus_maniculatus_bairdii
ENSMOCG00000020067Cpsf38289.944ENSPMAG00000004841cpsf39989.944Petromyzon_marinus
ENSMOCG00000020067Cpsf39792.654ENSPCIG00000009823CPSF39892.654Phascolarctos_cinereus
ENSMOCG00000020067Cpsf39984.389ENSPFOG00000010418-9884.389Poecilia_formosa
ENSMOCG00000020067Cpsf39982.006ENSPFOG00000015922cpsf39982.006Poecilia_formosa
ENSMOCG00000020067Cpsf35775.000ENSPLAG00000021300-9975.000Poecilia_latipinna
ENSMOCG00000020067Cpsf39982.006ENSPLAG00000000882cpsf39982.006Poecilia_latipinna
ENSMOCG00000020067Cpsf39982.153ENSPMEG00000018309cpsf39982.153Poecilia_mexicana
ENSMOCG00000020067Cpsf39179.680ENSPREG00000014875cpsf39979.680Poecilia_reticulata
ENSMOCG00000020067Cpsf39981.860ENSPREG00000004482CPSF39881.860Poecilia_reticulata
ENSMOCG00000020067Cpsf310089.912ENSPPYG00000012666CPSF310089.912Pongo_abelii
ENSMOCG00000020067Cpsf39561.974ENSPCAG00000015042CPSF39561.974Procavia_capensis
ENSMOCG00000020067Cpsf38792.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSMOCG00000020067Cpsf39994.282ENSPVAG00000005324CPSF39994.282Pteropus_vampyrus
ENSMOCG00000020067Cpsf38391.160ENSPNYG00000021047CPSF39191.160Pundamilia_nyererei
ENSMOCG00000020067Cpsf39982.232ENSPNYG00000004405cpsf39982.232Pundamilia_nyererei
ENSMOCG00000020067Cpsf39983.971ENSPNAG00000023060cpsf39883.971Pygocentrus_nattereri
ENSMOCG00000020067Cpsf39994.282ENSRNOG00000052418Cpsf39994.282Rattus_norvegicus
ENSMOCG00000020067Cpsf310088.304ENSRBIG00000041615CPSF39989.335Rhinopithecus_bieti
ENSMOCG00000020067Cpsf310094.298ENSRROG00000033792CPSF310094.298Rhinopithecus_roxellana
ENSMOCG00000020067Cpsf38843.227YLR277CYSH18443.227Saccharomyces_cerevisiae
ENSMOCG00000020067Cpsf310088.116ENSSBOG00000027263CPSF310088.116Saimiri_boliviensis_boliviensis
ENSMOCG00000020067Cpsf310092.982ENSSHAG00000007024CPSF310092.982Sarcophilus_harrisii
ENSMOCG00000020067Cpsf39985.316ENSSFOG00015002108cpsf39985.316Scleropages_formosus
ENSMOCG00000020067Cpsf39192.411ENSSMAG00000020534CPSF38992.411Scophthalmus_maximus
ENSMOCG00000020067Cpsf39985.000ENSSDUG00000018498CPSF39885.000Seriola_dumerili
ENSMOCG00000020067Cpsf39982.718ENSSDUG00000002828cpsf39682.718Seriola_dumerili
ENSMOCG00000020067Cpsf39985.494ENSSLDG00000008469cpsf39685.494Seriola_lalandi_dorsalis
ENSMOCG00000020067Cpsf39985.000ENSSLDG00000005234CPSF39885.000Seriola_lalandi_dorsalis
ENSMOCG00000020067Cpsf310076.462ENSSARG00000005186CPSF310076.462Sorex_araneus
ENSMOCG00000020067Cpsf39788.525ENSSPUG00000015525CPSF39788.525Sphenodon_punctatus
ENSMOCG00000020067Cpsf39985.147ENSSPAG00000002906CPSF39885.147Stegastes_partitus
ENSMOCG00000020067Cpsf39982.988ENSSPAG00000018579cpsf39882.988Stegastes_partitus
ENSMOCG00000020067Cpsf39994.143ENSSSCG00000020799CPSF39994.143Sus_scrofa
ENSMOCG00000020067Cpsf39990.896ENSTGUG00000013016CPSF39990.896Taeniopygia_guttata
ENSMOCG00000020067Cpsf35768.473ENSTRUG00000013905CPSF39968.473Takifugu_rubripes
ENSMOCG00000020067Cpsf39983.086ENSTRUG00000007030cpsf39783.086Takifugu_rubripes
ENSMOCG00000020067Cpsf38593.151ENSTBEG00000002707CPSF38593.151Tupaia_belangeri
ENSMOCG00000020067Cpsf38780.108ENSTTRG00000000861CPSF38880.108Tursiops_truncatus
ENSMOCG00000020067Cpsf39599.191ENSUAMG00000007535CPSF38999.191Ursus_americanus
ENSMOCG00000020067Cpsf38999.139ENSUMAG00000003676CPSF310093.972Ursus_maritimus
ENSMOCG00000020067Cpsf38999.481ENSVPAG00000008041CPSF39199.481Vicugna_pacos
ENSMOCG00000020067Cpsf310094.298ENSVVUG00000002194CPSF310094.298Vulpes_vulpes
ENSMOCG00000020067Cpsf39986.637ENSXETG00000008263cpsf39886.637Xenopus_tropicalis
ENSMOCG00000020067Cpsf35273.315ENSXCOG00000000957-8773.315Xiphophorus_couchianus
ENSMOCG00000020067Cpsf39982.301ENSXCOG00000019695cpsf39982.301Xiphophorus_couchianus
ENSMOCG00000020067Cpsf39984.683ENSXMAG00000027291CPSF39884.683Xiphophorus_maculatus
ENSMOCG00000020067Cpsf39982.006ENSXMAG00000009784cpsf39982.006Xiphophorus_maculatus

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