EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000020090 (Gene tree)
Gene ID: 102002061
Gene Symbol: Zc3h12c
Alias: C230027N18Rik
Full Name: zinc finger CCCH-type containing 12C
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 51909 bases
Position: chr5:46415262-46467170
Accession: 102002061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000023343	RNase_Zc3h12a	PF11977.8	3.3e-65	1	1
ENSMOCP00000023340	RNase_Zc3h12a	PF11977.8	3.5e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000027194	-	2712	XM_005347346	ENSMOCP00000023340	903 (aa)	XP_005347403	UPI00038C276D
ENSMOCT00000027197	-	2658	-	ENSMOCP00000023343	885 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000020090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000020090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000020090	Zc3h12c	86	55.000	ENSMOCG00000000094	Zc3h12b	91	55.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000020090	Zc3h12c	99	92.694	ENSG00000149289	ZC3H12C	100	92.840	Homo_sapiens
ENSMOCG00000020090	Zc3h12c	99	92.922	ENSAMEG00000009188	ZC3H12C	99	92.922	Ailuropoda_melanoleuca
ENSMOCG00000020090	Zc3h12c	71	87.840	ENSAPLG00000002854	ZC3H12C	100	87.840	Anas_platyrhynchos
ENSMOCG00000020090	Zc3h12c	99	82.712	ENSACAG00000001031	ZC3H12C	98	82.712	Anolis_carolinensis
ENSMOCG00000020090	Zc3h12c	99	93.379	ENSANAG00000026999	ZC3H12C	99	93.379	Aotus_nancymaae
ENSMOCG00000020090	Zc3h12c	99	91.448	ENSBTAG00000008732	ZC3H12C	99	91.448	Bos_taurus
ENSMOCG00000020090	Zc3h12c	99	92.922	ENSCJAG00000010319	ZC3H12C	99	92.922	Callithrix_jacchus
ENSMOCG00000020090	Zc3h12c	99	89.282	ENSCAFG00000014297	ZC3H12C	99	89.282	Canis_familiaris
ENSMOCG00000020090	Zc3h12c	99	89.282	ENSCAFG00020006999	ZC3H12C	99	89.282	Canis_lupus_dingo
ENSMOCG00000020090	Zc3h12c	99	91.562	ENSCHIG00000021221	ZC3H12C	99	91.562	Capra_hircus
ENSMOCG00000020090	Zc3h12c	95	91.104	ENSTSYG00000005412	ZC3H12C	99	91.104	Carlito_syrichta
ENSMOCG00000020090	Zc3h12c	99	89.168	ENSCAPG00000011610	ZC3H12C	99	89.168	Cavia_aperea
ENSMOCG00000020090	Zc3h12c	99	89.041	ENSCPOG00000032962	ZC3H12C	99	89.041	Cavia_porcellus
ENSMOCG00000020090	Zc3h12c	99	93.379	ENSCCAG00000022395	ZC3H12C	100	93.427	Cebus_capucinus
ENSMOCG00000020090	Zc3h12c	99	92.466	ENSCATG00000041641	ZC3H12C	99	92.466	Cercocebus_atys
ENSMOCG00000020090	Zc3h12c	99	92.922	ENSCLAG00000012577	ZC3H12C	100	93.075	Chinchilla_lanigera
ENSMOCG00000020090	Zc3h12c	99	92.009	ENSCSAG00000002945	ZC3H12C	99	92.009	Chlorocebus_sabaeus
ENSMOCG00000020090	Zc3h12c	99	86.105	ENSCHOG00000013202	-	100	86.199	Choloepus_hoffmanni
ENSMOCG00000020090	Zc3h12c	99	84.659	ENSCPBG00000021043	ZC3H12C	100	84.930	Chrysemys_picta_bellii
ENSMOCG00000020090	Zc3h12c	99	92.237	ENSCANG00000040994	ZC3H12C	99	92.237	Colobus_angolensis_palliatus
ENSMOCG00000020090	Zc3h12c	100	97.564	ENSCGRG00001013672	Zc3h12c	100	97.564	Cricetulus_griseus_chok1gshd
ENSMOCG00000020090	Zc3h12c	99	97.603	ENSCGRG00000001308	Zc3h12c	100	97.561	Cricetulus_griseus_crigri
ENSMOCG00000020090	Zc3h12c	99	90.000	ENSDNOG00000013040	ZC3H12C	99	90.114	Dasypus_novemcinctus
ENSMOCG00000020090	Zc3h12c	99	92.018	ENSDORG00000009134	Zc3h12c	100	92.018	Dipodomys_ordii
ENSMOCG00000020090	Zc3h12c	71	95.680	ENSETEG00000008027	ZC3H12C	100	95.680	Echinops_telfairi
ENSMOCG00000020090	Zc3h12c	99	92.808	ENSEASG00005010098	ZC3H12C	99	92.808	Equus_asinus_asinus
ENSMOCG00000020090	Zc3h12c	99	92.694	ENSECAG00000000462	ZC3H12C	100	92.840	Equus_caballus
ENSMOCG00000020090	Zc3h12c	65	91.068	ENSEEUG00000005709	-	100	91.068	Erinaceus_europaeus
ENSMOCG00000020090	Zc3h12c	99	90.753	ENSFCAG00000010665	ZC3H12C	99	90.753	Felis_catus
ENSMOCG00000020090	Zc3h12c	99	83.995	ENSFALG00000008776	ZC3H12C	99	83.995	Ficedula_albicollis
ENSMOCG00000020090	Zc3h12c	99	93.265	ENSFDAG00000017997	ZC3H12C	100	93.779	Fukomys_damarensis
ENSMOCG00000020090	Zc3h12c	96	84.014	ENSGALG00000017154	ZC3H12C	100	84.014	Gallus_gallus
ENSMOCG00000020090	Zc3h12c	95	83.353	ENSGAGG00000024154	ZC3H12C	86	83.894	Gopherus_agassizii
ENSMOCG00000020090	Zc3h12c	99	92.580	ENSGGOG00000010117	ZC3H12C	99	92.580	Gorilla_gorilla
ENSMOCG00000020090	Zc3h12c	99	93.379	ENSHGLG00000019021	ZC3H12C	100	92.534	Heterocephalus_glaber_female
ENSMOCG00000020090	Zc3h12c	99	93.379	ENSHGLG00100007295	ZC3H12C	100	92.534	Heterocephalus_glaber_male
ENSMOCG00000020090	Zc3h12c	100	94.684	ENSSTOG00000022143	ZC3H12C	100	95.434	Ictidomys_tridecemlineatus
ENSMOCG00000020090	Zc3h12c	99	94.635	ENSJJAG00000001147	Zc3h12c	100	94.635	Jaculus_jaculus
ENSMOCG00000020090	Zc3h12c	99	74.831	ENSLACG00000009305	ZC3H12C	99	74.831	Latimeria_chalumnae
ENSMOCG00000020090	Zc3h12c	71	95.534	ENSLAFG00000016296	ZC3H12C	100	95.534	Loxodonta_africana
ENSMOCG00000020090	Zc3h12c	99	92.466	ENSMFAG00000042068	ZC3H12C	99	92.466	Macaca_fascicularis
ENSMOCG00000020090	Zc3h12c	99	92.466	ENSMMUG00000048435	ZC3H12C	99	92.466	Macaca_mulatta
ENSMOCG00000020090	Zc3h12c	99	92.466	ENSMNEG00000032663	ZC3H12C	100	92.723	Macaca_nemestrina
ENSMOCG00000020090	Zc3h12c	99	92.352	ENSMLEG00000032083	ZC3H12C	99	92.352	Mandrillus_leucophaeus
ENSMOCG00000020090	Zc3h12c	99	82.579	ENSMGAG00000015143	ZC3H12C	99	82.653	Meleagris_gallopavo
ENSMOCG00000020090	Zc3h12c	100	96.681	ENSMAUG00000020412	Zc3h12c	100	96.681	Mesocricetus_auratus
ENSMOCG00000020090	Zc3h12c	99	93.950	ENSMICG00000011455	ZC3H12C	100	94.249	Microcebus_murinus
ENSMOCG00000020090	Zc3h12c	96	88.435	ENSMODG00000014555	ZC3H12C	100	88.435	Monodelphis_domestica
ENSMOCG00000020090	Zc3h12c	100	95.903	MGP_CAROLIEiJ_G0032210	Zc3h12c	100	95.903	Mus_caroli
ENSMOCG00000020090	Zc3h12c	100	96.456	ENSMUSG00000035164	Zc3h12c	100	96.456	Mus_musculus
ENSMOCG00000020090	Zc3h12c	100	95.017	MGP_PahariEiJ_G0015078	Zc3h12c	100	95.017	Mus_pahari
ENSMOCG00000020090	Zc3h12c	100	96.235	MGP_SPRETEiJ_G0033350	Zc3h12c	100	96.235	Mus_spretus
ENSMOCG00000020090	Zc3h12c	100	85.714	ENSMPUG00000005888	ZC3H12C	100	85.714	Mustela_putorius_furo
ENSMOCG00000020090	Zc3h12c	99	91.895	ENSMLUG00000017189	ZC3H12C	100	91.895	Myotis_lucifugus
ENSMOCG00000020090	Zc3h12c	100	94.131	ENSNGAG00000023957	Zc3h12c	100	94.131	Nannospalax_galili
ENSMOCG00000020090	Zc3h12c	99	93.037	ENSNLEG00000029829	ZC3H12C	99	93.037	Nomascus_leucogenys
ENSMOCG00000020090	Zc3h12c	99	84.755	ENSMEUG00000015398	ZC3H12C	100	84.755	Notamacropus_eugenii
ENSMOCG00000020090	Zc3h12c	71	82.884	ENSOPRG00000003370	-	96	82.884	Ochotona_princeps
ENSMOCG00000020090	Zc3h12c	99	89.726	ENSODEG00000011026	ZC3H12C	99	89.726	Octodon_degus
ENSMOCG00000020090	Zc3h12c	71	84.335	ENSOANG00000006242	-	99	84.335	Ornithorhynchus_anatinus
ENSMOCG00000020090	Zc3h12c	99	92.938	ENSOCUG00000005283	ZC3H12C	100	92.938	Oryctolagus_cuniculus
ENSMOCG00000020090	Zc3h12c	99	92.246	ENSOGAG00000013223	ZC3H12C	99	92.246	Otolemur_garnettii
ENSMOCG00000020090	Zc3h12c	99	86.986	ENSOARG00000012999	ZC3H12C	97	92.246	Ovis_aries
ENSMOCG00000020090	Zc3h12c	99	92.922	ENSPPAG00000041914	ZC3H12C	99	92.922	Pan_paniscus
ENSMOCG00000020090	Zc3h12c	99	90.525	ENSPPRG00000006582	ZC3H12C	99	90.525	Panthera_pardus
ENSMOCG00000020090	Zc3h12c	86	88.199	ENSPTIG00000009995	ZC3H12C	99	88.354	Panthera_tigris_altaica
ENSMOCG00000020090	Zc3h12c	99	92.922	ENSPTRG00000050494	ZC3H12C	99	92.922	Pan_troglodytes
ENSMOCG00000020090	Zc3h12c	99	92.466	ENSPANG00000023930	ZC3H12C	99	92.466	Papio_anubis
ENSMOCG00000020090	Zc3h12c	96	83.449	ENSPSIG00000005959	ZC3H12C	100	84.028	Pelodiscus_sinensis
ENSMOCG00000020090	Zc3h12c	99	89.384	ENSPEMG00000008502	Zc3h12c	100	96.129	Peromyscus_maniculatus_bairdii
ENSMOCG00000020090	Zc3h12c	96	88.318	ENSPCIG00000022169	ZC3H12C	100	88.318	Phascolarctos_cinereus
ENSMOCG00000020090	Zc3h12c	96	92.723	ENSPPYG00000003851	ZC3H12C	100	92.723	Pongo_abelii
ENSMOCG00000020090	Zc3h12c	64	94.912	ENSPCAG00000015682	ZC3H12C	100	94.912	Procavia_capensis
ENSMOCG00000020090	Zc3h12c	99	94.064	ENSPCOG00000024737	ZC3H12C	99	94.064	Propithecus_coquereli
ENSMOCG00000020090	Zc3h12c	99	90.899	ENSPVAG00000014329	ZC3H12C	99	90.899	Pteropus_vampyrus
ENSMOCG00000020090	Zc3h12c	100	96.235	ENSRNOG00000012470	Zc3h12c	100	96.235	Rattus_norvegicus
ENSMOCG00000020090	Zc3h12c	99	92.352	ENSRBIG00000040441	ZC3H12C	100	92.488	Rhinopithecus_bieti
ENSMOCG00000020090	Zc3h12c	99	92.352	ENSRROG00000004335	ZC3H12C	99	92.352	Rhinopithecus_roxellana
ENSMOCG00000020090	Zc3h12c	99	93.607	ENSSBOG00000025582	ZC3H12C	100	93.662	Saimiri_boliviensis_boliviensis
ENSMOCG00000020090	Zc3h12c	99	85.568	ENSSHAG00000005597	ZC3H12C	100	88.201	Sarcophilus_harrisii
ENSMOCG00000020090	Zc3h12c	71	96.013	ENSSARG00000003433	ZC3H12C	100	96.013	Sorex_araneus
ENSMOCG00000020090	Zc3h12c	99	85.568	ENSSPUG00000001832	ZC3H12C	99	85.568	Sphenodon_punctatus
ENSMOCG00000020090	Zc3h12c	99	93.158	ENSSSCG00000015014	ZC3H12C	100	93.435	Sus_scrofa
ENSMOCG00000020090	Zc3h12c	72	86.406	ENSTGUG00000011244	ZC3H12C	100	86.406	Taeniopygia_guttata
ENSMOCG00000020090	Zc3h12c	99	93.037	ENSTTRG00000005096	ZC3H12C	100	93.037	Tursiops_truncatus
ENSMOCG00000020090	Zc3h12c	99	93.265	ENSUAMG00000006051	ZC3H12C	99	93.179	Ursus_americanus
ENSMOCG00000020090	Zc3h12c	99	92.639	ENSUMAG00000007283	ZC3H12C	99	92.833	Ursus_maritimus
ENSMOCG00000020090	Zc3h12c	87	90.880	ENSVPAG00000003110	ZC3H12C	88	90.880	Vicugna_pacos
ENSMOCG00000020090	Zc3h12c	98	71.347	ENSXETG00000033837	ZC3H12C	99	71.347	Xenopus_tropicalis