EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000020201 (Gene tree)
Gene ID: 101981104
Gene Symbol: Ythdc1
Alias: A730098D12Rik
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 31272 bases
Position: chrLG1:34562824-34594095
Accession: 101981104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000023510	YTH	PF04146.15	9.6e-40	1	1
ENSMOCP00000023518	YTH	PF04146.15	1e-39	1	1
ENSMOCP00000023515	YTH	PF04146.15	1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000027372	-	2181	-	ENSMOCP00000023518	726 (aa)	-	-
ENSMOCT00000027364	-	2870	XM_005359413	ENSMOCP00000023510	706 (aa)	XP_005359470	UPI00038C62D9
ENSMOCT00000027369	-	3003	XM_005359411	ENSMOCP00000023515	732 (aa)	XP_005359468	UPI00038BDF04

Gene Model

Click here to download ENSMOCG00000020201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000020201's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000020201	Ythdc1	100	97.415	ENSG00000083896	YTHDC1	100	97.415	Homo_sapiens
ENSMOCG00000020201	Ythdc1	58	59.102	ENSAPOG00000013997	ythdc1	57	62.250	Acanthochromis_polyacanthus
ENSMOCG00000020201	Ythdc1	100	93.434	ENSAMEG00000005688	YTHDC1	100	93.434	Ailuropoda_melanoleuca
ENSMOCG00000020201	Ythdc1	71	57.412	ENSACIG00000019728	ythdc1	80	58.920	Amphilophus_citrinellus
ENSMOCG00000020201	Ythdc1	58	60.135	ENSAOCG00000000239	ythdc1	59	67.464	Amphiprion_ocellaris
ENSMOCG00000020201	Ythdc1	51	64.151	ENSAPEG00000000618	ythdc1	53	68.661	Amphiprion_percula
ENSMOCG00000020201	Ythdc1	92	84.155	ENSAPLG00000009921	YTHDC1	92	85.501	Anas_platyrhynchos
ENSMOCG00000020201	Ythdc1	93	83.676	ENSACAG00000009697	YTHDC1	93	83.529	Anolis_carolinensis
ENSMOCG00000020201	Ythdc1	100	97.183	ENSANAG00000001522	YTHDC1	100	97.183	Aotus_nancymaae
ENSMOCG00000020201	Ythdc1	92	51.906	ENSACLG00000019371	ythdc1	59	66.029	Astatotilapia_calliptera
ENSMOCG00000020201	Ythdc1	92	64.435	ENSAMXG00000006978	ythdc1	92	65.022	Astyanax_mexicanus
ENSMOCG00000020201	Ythdc1	93	92.082	ENSBTAG00000015572	YTHDC1	93	93.109	Bos_taurus
ENSMOCG00000020201	Ythdc1	100	97.324	ENSCJAG00000009934	YTHDC1	100	97.324	Callithrix_jacchus
ENSMOCG00000020201	Ythdc1	100	93.297	ENSCAFG00000002821	YTHDC1	100	93.297	Canis_familiaris
ENSMOCG00000020201	Ythdc1	100	93.297	ENSCAFG00020027112	YTHDC1	100	93.297	Canis_lupus_dingo
ENSMOCG00000020201	Ythdc1	91	87.328	ENSCHIG00000004810	YTHDC1	95	92.925	Capra_hircus
ENSMOCG00000020201	Ythdc1	100	97.320	ENSTSYG00000011668	YTHDC1	100	97.320	Carlito_syrichta
ENSMOCG00000020201	Ythdc1	90	69.640	ENSCAPG00000008722	YTHDC1	90	66.873	Cavia_aperea
ENSMOCG00000020201	Ythdc1	100	89.986	ENSCPOG00000010929	YTHDC1	100	89.986	Cavia_porcellus
ENSMOCG00000020201	Ythdc1	100	97.599	ENSCCAG00000035754	YTHDC1	100	97.599	Cebus_capucinus
ENSMOCG00000020201	Ythdc1	100	97.283	ENSCATG00000036320	YTHDC1	100	97.283	Cercocebus_atys
ENSMOCG00000020201	Ythdc1	99	96.823	ENSCLAG00000005482	YTHDC1	100	96.424	Chinchilla_lanigera
ENSMOCG00000020201	Ythdc1	100	96.196	ENSCSAG00000005252	YTHDC1	100	96.196	Chlorocebus_sabaeus
ENSMOCG00000020201	Ythdc1	92	85.991	ENSCPBG00000021965	YTHDC1	94	85.933	Chrysemys_picta_bellii
ENSMOCG00000020201	Ythdc1	100	97.324	ENSCANG00000004769	YTHDC1	100	97.324	Colobus_angolensis_palliatus
ENSMOCG00000020201	Ythdc1	100	98.639	ENSCGRG00001000816	Ythdc1	100	98.639	Cricetulus_griseus_chok1gshd
ENSMOCG00000020201	Ythdc1	99	98.571	ENSCGRG00000009807	Ythdc1	99	98.571	Cricetulus_griseus_crigri
ENSMOCG00000020201	Ythdc1	58	59.091	ENSCSEG00000020404	ythdc1	94	54.282	Cynoglossus_semilaevis
ENSMOCG00000020201	Ythdc1	58	58.170	ENSCVAG00000022349	ythdc1	59	65.542	Cyprinodon_variegatus
ENSMOCG00000020201	Ythdc1	92	63.922	ENSDARG00000051953	ythdc1	91	63.066	Danio_rerio
ENSMOCG00000020201	Ythdc1	93	94.412	ENSDNOG00000004949	YTHDC1	93	93.382	Dasypus_novemcinctus
ENSMOCG00000020201	Ythdc1	100	96.170	ENSDORG00000013045	Ythdc1	100	96.576	Dipodomys_ordii
ENSMOCG00000020201	Ythdc1	72	100.000	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSMOCG00000020201	Ythdc1	100	95.264	ENSEASG00005018383	YTHDC1	100	95.264	Equus_asinus_asinus
ENSMOCG00000020201	Ythdc1	100	93.297	ENSECAG00000018303	YTHDC1	100	95.468	Equus_caballus
ENSMOCG00000020201	Ythdc1	93	91.202	ENSEEUG00000015466	YTHDC1	93	92.375	Erinaceus_europaeus
ENSMOCG00000020201	Ythdc1	92	61.933	ENSELUG00000014029	ythdc1	95	62.709	Esox_lucius
ENSMOCG00000020201	Ythdc1	100	95.787	ENSFCAG00000026791	YTHDC1	100	95.787	Felis_catus
ENSMOCG00000020201	Ythdc1	76	88.508	ENSFALG00000006581	YTHDC1	97	88.508	Ficedula_albicollis
ENSMOCG00000020201	Ythdc1	99	96.700	ENSFDAG00000018560	YTHDC1	100	96.700	Fukomys_damarensis
ENSMOCG00000020201	Ythdc1	66	67.273	ENSFHEG00000001286	ythdc1	60	55.128	Fundulus_heteroclitus
ENSMOCG00000020201	Ythdc1	60	66.946	ENSGMOG00000018815	ythdc1	68	67.797	Gadus_morhua
ENSMOCG00000020201	Ythdc1	92	86.133	ENSGALG00000035906	YTHDC1	88	83.716	Gallus_gallus
ENSMOCG00000020201	Ythdc1	58	62.093	ENSGACG00000015486	ythdc1	57	62.530	Gasterosteus_aculeatus
ENSMOCG00000020201	Ythdc1	93	86.618	ENSGAGG00000007108	YTHDC1	93	86.618	Gopherus_agassizii
ENSMOCG00000020201	Ythdc1	100	97.283	ENSGGOG00000021958	YTHDC1	100	97.283	Gorilla_gorilla
ENSMOCG00000020201	Ythdc1	92	52.053	ENSHBUG00000019288	ythdc1	59	66.029	Haplochromis_burtoni
ENSMOCG00000020201	Ythdc1	94	70.725	ENSHGLG00000003239	-	86	72.214	Heterocephalus_glaber_female
ENSMOCG00000020201	Ythdc1	100	96.726	ENSHGLG00000006319	-	100	96.726	Heterocephalus_glaber_female
ENSMOCG00000020201	Ythdc1	100	95.640	ENSHGLG00100001556	-	100	95.856	Heterocephalus_glaber_male
ENSMOCG00000020201	Ythdc1	94	69.697	ENSHGLG00100008060	-	86	70.710	Heterocephalus_glaber_male
ENSMOCG00000020201	Ythdc1	70	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSMOCG00000020201	Ythdc1	93	66.570	ENSIPUG00000018136	ythdc1	91	66.471	Ictalurus_punctatus
ENSMOCG00000020201	Ythdc1	100	97.147	ENSSTOG00000013652	YTHDC1	100	97.147	Ictidomys_tridecemlineatus
ENSMOCG00000020201	Ythdc1	92	91.791	ENSJJAG00000010268	Ythdc1	93	93.134	Jaculus_jaculus
ENSMOCG00000020201	Ythdc1	58	59.417	ENSKMAG00000006483	ythdc1	85	65.238	Kryptolebias_marmoratus
ENSMOCG00000020201	Ythdc1	65	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSMOCG00000020201	Ythdc1	87	73.561	ENSLACG00000004893	YTHDC1	92	73.364	Latimeria_chalumnae
ENSMOCG00000020201	Ythdc1	93	72.687	ENSLOCG00000003045	ythdc1	92	86.792	Lepisosteus_oculatus
ENSMOCG00000020201	Ythdc1	100	96.044	ENSLAFG00000021592	YTHDC1	100	96.044	Loxodonta_africana
ENSMOCG00000020201	Ythdc1	100	97.418	ENSMFAG00000031927	YTHDC1	100	97.418	Macaca_fascicularis
ENSMOCG00000020201	Ythdc1	99	97.383	ENSMMUG00000002265	YTHDC1	100	97.253	Macaca_mulatta
ENSMOCG00000020201	Ythdc1	100	97.324	ENSMNEG00000033751	YTHDC1	100	97.324	Macaca_nemestrina
ENSMOCG00000020201	Ythdc1	100	97.183	ENSMLEG00000042147	YTHDC1	100	97.183	Mandrillus_leucophaeus
ENSMOCG00000020201	Ythdc1	56	61.631	ENSMAMG00000013122	ythdc1	58	66.587	Mastacembelus_armatus
ENSMOCG00000020201	Ythdc1	92	51.906	ENSMZEG00005023173	ythdc1	59	66.029	Maylandia_zebra
ENSMOCG00000020201	Ythdc1	93	84.389	ENSMGAG00000010391	YTHDC1	92	85.862	Meleagris_gallopavo
ENSMOCG00000020201	Ythdc1	100	98.367	ENSMAUG00000001286	Ythdc1	100	98.367	Mesocricetus_auratus
ENSMOCG00000020201	Ythdc1	100	97.135	ENSMICG00000034640	YTHDC1	100	97.135	Microcebus_murinus
ENSMOCG00000020201	Ythdc1	96	50.420	ENSMODG00000010076	-	60	60.142	Monodelphis_domestica
ENSMOCG00000020201	Ythdc1	93	88.348	ENSMODG00000020754	-	92	87.316	Monodelphis_domestica
ENSMOCG00000020201	Ythdc1	66	56.695	ENSMODG00000009173	-	88	60.190	Monodelphis_domestica
ENSMOCG00000020201	Ythdc1	87	68.981	ENSMODG00000014337	-	95	69.554	Monodelphis_domestica
ENSMOCG00000020201	Ythdc1	51	65.699	ENSMALG00000013412	ythdc1	56	68.768	Monopterus_albus
ENSMOCG00000020201	Ythdc1	100	97.829	MGP_CAROLIEiJ_G0027347	Ythdc1	100	97.829	Mus_caroli
ENSMOCG00000020201	Ythdc1	100	97.693	ENSMUSG00000035851	Ythdc1	100	97.693	Mus_musculus
ENSMOCG00000020201	Ythdc1	100	97.829	MGP_PahariEiJ_G0017126	Ythdc1	100	97.829	Mus_pahari
ENSMOCG00000020201	Ythdc1	100	97.965	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.965	Mus_spretus
ENSMOCG00000020201	Ythdc1	93	71.988	ENSMPUG00000001743	YTHDC1	53	96.419	Mustela_putorius_furo
ENSMOCG00000020201	Ythdc1	99	95.297	ENSMLUG00000016300	YTHDC1	100	95.297	Myotis_lucifugus
ENSMOCG00000020201	Ythdc1	59	95.249	ENSNGAG00000024000	Ythdc1	93	95.249	Nannospalax_galili
ENSMOCG00000020201	Ythdc1	61	62.310	ENSNBRG00000007663	ythdc1	70	65.777	Neolamprologus_brichardi
ENSMOCG00000020201	Ythdc1	99	96.424	ENSNLEG00000009202	YTHDC1	99	96.424	Nomascus_leucogenys
ENSMOCG00000020201	Ythdc1	82	81.605	ENSMEUG00000007128	YTHDC1	81	81.605	Notamacropus_eugenii
ENSMOCG00000020201	Ythdc1	75	98.584	ENSOPRG00000008986	YTHDC1	74	98.584	Ochotona_princeps
ENSMOCG00000020201	Ythdc1	100	96.605	ENSODEG00000001715	YTHDC1	100	96.605	Octodon_degus
ENSMOCG00000020201	Ythdc1	92	52.346	ENSONIG00000012651	ythdc1	59	66.507	Oreochromis_niloticus
ENSMOCG00000020201	Ythdc1	89	76.911	ENSOANG00000014398	YTHDC1	55	97.215	Ornithorhynchus_anatinus
ENSMOCG00000020201	Ythdc1	93	80.556	ENSOCUG00000015886	YTHDC1	57	93.596	Oryctolagus_cuniculus
ENSMOCG00000020201	Ythdc1	92	52.232	ENSORLG00000030544	ythdc1	60	66.747	Oryzias_latipes
ENSMOCG00000020201	Ythdc1	92	52.530	ENSORLG00020019316	ythdc1	60	66.747	Oryzias_latipes_hni
ENSMOCG00000020201	Ythdc1	56	61.275	ENSOMEG00000000551	ythdc1	60	65.281	Oryzias_melastigma
ENSMOCG00000020201	Ythdc1	100	95.646	ENSOGAG00000003362	YTHDC1	100	95.646	Otolemur_garnettii
ENSMOCG00000020201	Ythdc1	93	92.082	ENSOARG00000008633	YTHDC1	93	93.109	Ovis_aries
ENSMOCG00000020201	Ythdc1	100	97.415	ENSPPAG00000041315	YTHDC1	100	97.415	Pan_paniscus
ENSMOCG00000020201	Ythdc1	100	96.070	ENSPPRG00000011979	YTHDC1	100	96.070	Panthera_pardus
ENSMOCG00000020201	Ythdc1	99	95.742	ENSPTIG00000015527	YTHDC1	100	95.742	Panthera_tigris_altaica
ENSMOCG00000020201	Ythdc1	100	97.415	ENSPTRG00000016105	YTHDC1	100	97.415	Pan_troglodytes
ENSMOCG00000020201	Ythdc1	100	97.283	ENSPANG00000021590	YTHDC1	100	97.283	Papio_anubis
ENSMOCG00000020201	Ythdc1	93	68.215	ENSPKIG00000018497	ythdc1	93	67.873	Paramormyrops_kingsleyae
ENSMOCG00000020201	Ythdc1	92	85.693	ENSPSIG00000002782	YTHDC1	92	85.842	Pelodiscus_sinensis
ENSMOCG00000020201	Ythdc1	55	56.364	ENSPMGG00000000970	-	72	64.460	Periophthalmus_magnuspinnatus
ENSMOCG00000020201	Ythdc1	99	98.898	ENSPEMG00000013850	Ythdc1	100	98.856	Peromyscus_maniculatus_bairdii
ENSMOCG00000020201	Ythdc1	93	88.201	ENSPCIG00000006870	YTHDC1	92	87.883	Phascolarctos_cinereus
ENSMOCG00000020201	Ythdc1	58	58.259	ENSPFOG00000013404	ythdc1	60	65.385	Poecilia_formosa
ENSMOCG00000020201	Ythdc1	58	58.259	ENSPLAG00000011079	ythdc1	85	65.385	Poecilia_latipinna
ENSMOCG00000020201	Ythdc1	58	58.259	ENSPMEG00000009238	ythdc1	60	65.385	Poecilia_mexicana
ENSMOCG00000020201	Ythdc1	58	58.353	ENSPREG00000016973	ythdc1	59	59.799	Poecilia_reticulata
ENSMOCG00000020201	Ythdc1	88	96.406	ENSPPYG00000014726	YTHDC1	100	96.406	Pongo_abelii
ENSMOCG00000020201	Ythdc1	77	89.091	ENSPCAG00000009607	YTHDC1	77	87.353	Procavia_capensis
ENSMOCG00000020201	Ythdc1	100	92.360	ENSPCOG00000019105	YTHDC1	100	92.360	Propithecus_coquereli
ENSMOCG00000020201	Ythdc1	93	90.511	ENSPVAG00000015551	YTHDC1	93	91.095	Pteropus_vampyrus
ENSMOCG00000020201	Ythdc1	92	51.906	ENSPNYG00000011687	ythdc1	59	66.029	Pundamilia_nyererei
ENSMOCG00000020201	Ythdc1	93	68.444	ENSPNAG00000028365	ythdc1	93	68.391	Pygocentrus_nattereri
ENSMOCG00000020201	Ythdc1	100	97.023	ENSRNOG00000001996	Ythdc1	100	97.023	Rattus_norvegicus
ENSMOCG00000020201	Ythdc1	99	96.149	ENSRBIG00000028279	YTHDC1	99	96.149	Rhinopithecus_bieti
ENSMOCG00000020201	Ythdc1	100	97.324	ENSRROG00000035028	YTHDC1	100	97.324	Rhinopithecus_roxellana
ENSMOCG00000020201	Ythdc1	100	97.418	ENSSBOG00000022353	YTHDC1	100	97.418	Saimiri_boliviensis_boliviensis
ENSMOCG00000020201	Ythdc1	93	87.649	ENSSHAG00000002538	YTHDC1	91	87.145	Sarcophilus_harrisii
ENSMOCG00000020201	Ythdc1	93	66.955	ENSSFOG00015003298	ythdc1	60	84.186	Scleropages_formosus
ENSMOCG00000020201	Ythdc1	58	59.031	ENSSMAG00000009086	ythdc1	94	54.386	Scophthalmus_maximus
ENSMOCG00000020201	Ythdc1	92	53.577	ENSSDUG00000022008	ythdc1	94	57.394	Seriola_dumerili
ENSMOCG00000020201	Ythdc1	56	60.775	ENSSLDG00000007926	ythdc1	94	57.039	Seriola_lalandi_dorsalis
ENSMOCG00000020201	Ythdc1	80	95.563	ENSSARG00000010960	YTHDC1	100	95.563	Sorex_araneus
ENSMOCG00000020201	Ythdc1	93	81.845	ENSSPUG00000009357	YTHDC1	94	82.451	Sphenodon_punctatus
ENSMOCG00000020201	Ythdc1	58	61.036	ENSSPAG00000011449	ythdc1	59	67.464	Stegastes_partitus
ENSMOCG00000020201	Ythdc1	100	95.412	ENSSSCG00000035505	YTHDC1	100	95.412	Sus_scrofa
ENSMOCG00000020201	Ythdc1	93	85.420	ENSTGUG00000004452	-	92	85.420	Taeniopygia_guttata
ENSMOCG00000020201	Ythdc1	65	57.506	ENSTRUG00000010142	ythdc1	71	62.350	Takifugu_rubripes
ENSMOCG00000020201	Ythdc1	86	59.275	ENSTNIG00000013243	ythdc1	89	65.534	Tetraodon_nigroviridis
ENSMOCG00000020201	Ythdc1	93	86.009	ENSTBEG00000011546	YTHDC1	92	86.451	Tupaia_belangeri
ENSMOCG00000020201	Ythdc1	93	91.520	ENSTTRG00000005083	YTHDC1	93	92.105	Tursiops_truncatus
ENSMOCG00000020201	Ythdc1	93	95.764	ENSUAMG00000010388	YTHDC1	100	95.764	Ursus_americanus
ENSMOCG00000020201	Ythdc1	99	82.711	ENSUMAG00000013668	YTHDC1	98	82.711	Ursus_maritimus
ENSMOCG00000020201	Ythdc1	100	96.469	ENSVPAG00000009040	YTHDC1	100	96.469	Vicugna_pacos
ENSMOCG00000020201	Ythdc1	99	95.890	ENSVVUG00000005387	YTHDC1	98	95.890	Vulpes_vulpes
ENSMOCG00000020201	Ythdc1	92	74.189	ENSXETG00000017960	ythdc1	91	73.887	Xenopus_tropicalis
ENSMOCG00000020201	Ythdc1	50	52.206	ENSXCOG00000000530	ythdc1	79	55.785	Xiphophorus_couchianus
ENSMOCG00000020201	Ythdc1	56	59.762	ENSXMAG00000005196	ythdc1	61	64.663	Xiphophorus_maculatus