EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000020285 (Gene tree)
Gene ID: 101994631
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 9548 bases
Position: chrJH996455.1:2106753-2116300
Accession: 101994631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000023620	PRP38	PF03371.15	4.7e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000027475	-	3021	XM_005367907	ENSMOCP00000023620	541 (aa)	XP_005367964	UPI00038C0139

Gene Model

Click here to download ENSMOCG00000020285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000020285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000020285	-	80	64.680	ENSATEG00000014482	-	59	83.696	Anabas_testudineus
ENSMOCG00000020285	-	100	93.199	ENSBTAG00000047874	PRPF38B	100	87.132	Bos_taurus
ENSMOCG00000020285	-	100	77.007	ENSCAFG00020010992	-	100	76.825	Canis_lupus_dingo
ENSMOCG00000020285	-	100	93.199	ENSCHIG00000024357	-	100	87.132	Capra_hircus
ENSMOCG00000020285	-	79	87.731	ENSCAPG00000009606	-	98	79.426	Cavia_aperea
ENSMOCG00000020285	-	100	90.074	ENSCPOG00000039545	-	100	82.721	Cavia_porcellus
ENSMOCG00000020285	-	100	90.328	ENSCLAG00000005801	-	100	89.781	Chinchilla_lanigera
ENSMOCG00000020285	-	65	82.955	ENSCHOG00000008972	-	69	78.906	Choloepus_hoffmanni
ENSMOCG00000020285	-	100	83.150	ENSCPBG00000028299	-	60	89.362	Chrysemys_picta_bellii
ENSMOCG00000020285	-	57	53.994	ENSCSAVG00000009443	-	70	75.263	Ciona_savignyi
ENSMOCG00000020285	-	80	62.719	ENSCSEG00000015030	-	59	81.455	Cynoglossus_semilaevis
ENSMOCG00000020285	-	82	92.018	ENSETEG00000014690	-	73	94.190	Echinops_telfairi
ENSMOCG00000020285	-	57	71.290	ENSELUG00000010390	-	50	79.926	Esox_lucius
ENSMOCG00000020285	-	87	60.941	ENSGMOG00000012080	-	59	81.227	Gadus_morhua
ENSMOCG00000020285	-	100	84.574	ENSGALG00000001972	-	60	89.970	Gallus_gallus
ENSMOCG00000020285	-	82	62.017	ENSGAFG00000008943	-	59	84.727	Gambusia_affinis
ENSMOCG00000020285	-	100	85.897	ENSGAGG00000001563	-	60	90.274	Gopherus_agassizii
ENSMOCG00000020285	-	100	90.146	ENSHGLG00000016583	PRPF38B	100	90.146	Heterocephalus_glaber_female
ENSMOCG00000020285	-	100	89.964	ENSHGLG00100015525	-	100	89.964	Heterocephalus_glaber_male
ENSMOCG00000020285	-	82	61.853	ENSKMAG00000005540	-	57	82.222	Kryptolebias_marmoratus
ENSMOCG00000020285	-	96	72.491	ENSLACG00000015511	-	50	92.593	Latimeria_chalumnae
ENSMOCG00000020285	-	84	60.042	ENSMMOG00000011639	-	59	82.609	Mola_mola
ENSMOCG00000020285	-	60	93.958	ENSMODG00000002350	-	93	98.611	Monodelphis_domestica
ENSMOCG00000020285	-	82	63.404	ENSMALG00000019479	-	59	84.058	Monopterus_albus
ENSMOCG00000020285	-	80	90.769	ENSOPRG00000013543	-	81	90.769	Ochotona_princeps
ENSMOCG00000020285	-	83	64.957	ENSONIG00000010129	-	60	83.696	Oreochromis_niloticus
ENSMOCG00000020285	-	91	80.000	ENSOANG00000007343	-	95	89.908	Ornithorhynchus_anatinus
ENSMOCG00000020285	-	82	63.636	ENSORLG00000015621	-	87	92.763	Oryzias_latipes
ENSMOCG00000020285	-	82	64.069	ENSORLG00020016276	-	87	92.763	Oryzias_latipes_hni
ENSMOCG00000020285	-	82	63.853	ENSORLG00015016270	-	74	92.157	Oryzias_latipes_hsok
ENSMOCG00000020285	-	82	64.286	ENSOMEG00000022050	-	90	91.613	Oryzias_melastigma
ENSMOCG00000020285	-	100	91.423	ENSOGAG00000027048	-	100	89.781	Otolemur_garnettii
ENSMOCG00000020285	-	100	91.360	ENSOARG00000018899	-	100	84.743	Ovis_aries
ENSMOCG00000020285	-	95	61.717	ENSPKIG00000017291	-	51	84.559	Paramormyrops_kingsleyae
ENSMOCG00000020285	-	97	63.178	ENSPKIG00000004815	-	53	87.454	Paramormyrops_kingsleyae
ENSMOCG00000020285	-	100	85.348	ENSPSIG00000016569	-	60	89.058	Pelodiscus_sinensis
ENSMOCG00000020285	-	82	62.876	ENSPFOG00000004025	-	80	92.810	Poecilia_formosa
ENSMOCG00000020285	-	82	62.876	ENSPLAG00000019842	-	59	85.091	Poecilia_latipinna
ENSMOCG00000020285	-	87	63.866	ENSPMEG00000004807	-	57	85.091	Poecilia_mexicana
ENSMOCG00000020285	-	71	69.767	ENSPREG00000015599	-	83	92.810	Poecilia_reticulata
ENSMOCG00000020285	-	51	84.643	ENSPNAG00000017484	-	53	84.838	Pygocentrus_nattereri
ENSMOCG00000020285	-	100	96.507	ENSRNOG00000020438	Prpf38b	100	96.507	Rattus_norvegicus
ENSMOCG00000020285	-	91	62.431	ENSSFOG00015011251	-	80	95.425	Scleropages_formosus
ENSMOCG00000020285	-	82	62.633	ENSSLDG00000023487	-	83	92.157	Seriola_lalandi_dorsalis
ENSMOCG00000020285	-	100	82.847	ENSSPUG00000017742	-	60	88.182	Sphenodon_punctatus
ENSMOCG00000020285	-	70	70.103	ENSTRUG00000011765	-	60	83.032	Takifugu_rubripes
ENSMOCG00000020285	-	50	81.655	ENSTNIG00000015299	-	68	83.032	Tetraodon_nigroviridis
ENSMOCG00000020285	-	94	86.693	ENSTBEG00000007504	-	100	86.497	Tupaia_belangeri
ENSMOCG00000020285	-	100	92.096	ENSTTRG00000006479	-	100	88.235	Tursiops_truncatus
ENSMOCG00000020285	-	99	82.841	ENSVPAG00000005541	-	99	82.472	Vicugna_pacos
ENSMOCG00000020285	-	94	73.786	ENSXETG00000005260	prpf38b	54	91.513	Xenopus_tropicalis
ENSMOCG00000020285	-	82	61.684	ENSXCOG00000008329	-	59	84.727	Xiphophorus_couchianus
ENSMOCG00000020285	-	82	61.684	ENSXMAG00000023831	-	59	84.727	Xiphophorus_maculatus