EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000020334 (Gene tree)
Gene ID: 101998976
Gene Symbol: Tnrc6b
Alias: 2700090M07Rik|A730065C02Rik|D230019K20Rik
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 162623 bases
Position: chr15:12990599-13153221
Accession: 101998976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000023709	Ago_hook	PF10427.9	1.8e-20	1	1
ENSMOCP00000023712	Ago_hook	PF10427.9	3.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000027564	-	5364	-	ENSMOCP00000023709	1787 (aa)	-	-
ENSMOCT00000027567	-	5208	XM_013348739	ENSMOCP00000023712	1735 (aa)	XP_013204193	UPI00038C27AF

Gene Model

Click here to download ENSMOCG00000020334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000020334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000020334	Tnrc6b	98	54.922	ENSMOCG00000000152	Tnrc6a	94	52.604
ENSMOCG00000020334	Tnrc6b	96	33.903	ENSMOCG00000015879	Tnrc6c	99	34.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSG00000100354	TNRC6B	95	100.000	Homo_sapiens
ENSMOCG00000020334	Tnrc6b	99	94.000	ENSAMEG00000011025	TNRC6B	97	94.000	Ailuropoda_melanoleuca
ENSMOCG00000020334	Tnrc6b	96	91.045	ENSAPLG00000009347	TNRC6B	96	91.542	Anas_platyrhynchos
ENSMOCG00000020334	Tnrc6b	97	91.500	ENSACAG00000007281	TNRC6B	96	92.000	Anolis_carolinensis
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSANAG00000035042	TNRC6B	96	96.000	Aotus_nancymaae
ENSMOCG00000020334	Tnrc6b	50	45.525	ENSAMXG00000008707	tnrc6b	93	49.813	Astyanax_mexicanus
ENSMOCG00000020334	Tnrc6b	98	95.000	ENSBTAG00000021076	TNRC6B	96	95.000	Bos_taurus
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSCJAG00000002732	TNRC6B	96	96.000	Callithrix_jacchus
ENSMOCG00000020334	Tnrc6b	96	96.269	ENSCAFG00000001255	TNRC6B	96	95.000	Canis_familiaris
ENSMOCG00000020334	Tnrc6b	99	95.000	ENSCAFG00020002189	TNRC6B	96	95.000	Canis_lupus_dingo
ENSMOCG00000020334	Tnrc6b	99	95.500	ENSCHIG00000003491	TNRC6B	96	95.500	Capra_hircus
ENSMOCG00000020334	Tnrc6b	97	95.500	ENSTSYG00000011836	TNRC6B	96	95.500	Carlito_syrichta
ENSMOCG00000020334	Tnrc6b	100	96.000	ENSCPOG00000005705	TNRC6B	97	96.000	Cavia_porcellus
ENSMOCG00000020334	Tnrc6b	96	90.539	ENSCCAG00000019912	TNRC6B	100	90.777	Cebus_capucinus
ENSMOCG00000020334	Tnrc6b	96	95.500	ENSCATG00000029291	TNRC6B	96	95.500	Cercocebus_atys
ENSMOCG00000020334	Tnrc6b	100	96.000	ENSCLAG00000016942	TNRC6B	97	96.000	Chinchilla_lanigera
ENSMOCG00000020334	Tnrc6b	93	96.000	ENSCSAG00000006021	TNRC6B	91	96.000	Chlorocebus_sabaeus
ENSMOCG00000020334	Tnrc6b	89	98.592	ENSCPBG00000022932	TNRC6B	93	98.592	Chrysemys_picta_bellii
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSCANG00000030776	TNRC6B	96	96.000	Colobus_angolensis_palliatus
ENSMOCG00000020334	Tnrc6b	96	99.248	ENSCGRG00001020166	Tnrc6b	96	99.248	Cricetulus_griseus_chok1gshd
ENSMOCG00000020334	Tnrc6b	100	98.000	ENSCGRG00000016696	Tnrc6b	96	98.000	Cricetulus_griseus_crigri
ENSMOCG00000020334	Tnrc6b	100	96.000	ENSDNOG00000012744	TNRC6B	97	96.000	Dasypus_novemcinctus
ENSMOCG00000020334	Tnrc6b	100	95.029	ENSDORG00000003386	Tnrc6b	97	95.000	Dipodomys_ordii
ENSMOCG00000020334	Tnrc6b	97	84.585	ENSETEG00000006570	TNRC6B	96	85.116	Echinops_telfairi
ENSMOCG00000020334	Tnrc6b	99	95.500	ENSEASG00005005306	TNRC6B	96	95.500	Equus_asinus_asinus
ENSMOCG00000020334	Tnrc6b	100	95.500	ENSECAG00000009759	TNRC6B	99	94.517	Equus_caballus
ENSMOCG00000020334	Tnrc6b	53	96.460	ENSEEUG00000008690	-	55	95.628	Erinaceus_europaeus
ENSMOCG00000020334	Tnrc6b	100	95.500	ENSFCAG00000004791	TNRC6B	97	95.500	Felis_catus
ENSMOCG00000020334	Tnrc6b	93	92.040	ENSFALG00000012195	TNRC6B	96	92.537	Ficedula_albicollis
ENSMOCG00000020334	Tnrc6b	100	95.500	ENSFDAG00000021368	TNRC6B	97	95.607	Fukomys_damarensis
ENSMOCG00000020334	Tnrc6b	97	91.500	ENSGALG00000012050	TNRC6B	94	91.500	Gallus_gallus
ENSMOCG00000020334	Tnrc6b	97	91.500	ENSGAGG00000025188	TNRC6B	95	91.500	Gopherus_agassizii
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSGGOG00000008444	TNRC6B	96	96.000	Gorilla_gorilla
ENSMOCG00000020334	Tnrc6b	100	96.000	ENSHGLG00000009306	TNRC6B	97	96.000	Heterocephalus_glaber_female
ENSMOCG00000020334	Tnrc6b	100	96.000	ENSHGLG00100018108	TNRC6B	97	96.000	Heterocephalus_glaber_male
ENSMOCG00000020334	Tnrc6b	79	43.730	ENSIPUG00000001515	tnrc6b	91	51.562	Ictalurus_punctatus
ENSMOCG00000020334	Tnrc6b	100	96.500	ENSSTOG00000008927	TNRC6B	97	96.500	Ictidomys_tridecemlineatus
ENSMOCG00000020334	Tnrc6b	100	95.500	ENSJJAG00000015779	Tnrc6b	97	95.500	Jaculus_jaculus
ENSMOCG00000020334	Tnrc6b	98	61.459	ENSLACG00000000628	-	99	60.132	Latimeria_chalumnae
ENSMOCG00000020334	Tnrc6b	75	94.000	ENSLAFG00000014473	TNRC6B	96	94.000	Loxodonta_africana
ENSMOCG00000020334	Tnrc6b	96	96.000	ENSMFAG00000003862	TNRC6B	96	96.000	Macaca_fascicularis
ENSMOCG00000020334	Tnrc6b	100	96.000	ENSMMUG00000021345	TNRC6B	99	95.234	Macaca_mulatta
ENSMOCG00000020334	Tnrc6b	96	96.000	ENSMNEG00000042745	TNRC6B	96	96.000	Macaca_nemestrina
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSMLEG00000041780	TNRC6B	96	96.000	Mandrillus_leucophaeus
ENSMOCG00000020334	Tnrc6b	98	91.000	ENSMGAG00000012333	TNRC6B	96	91.000	Meleagris_gallopavo
ENSMOCG00000020334	Tnrc6b	100	98.500	ENSMAUG00000016123	Tnrc6b	97	98.500	Mesocricetus_auratus
ENSMOCG00000020334	Tnrc6b	99	95.000	ENSMICG00000014056	TNRC6B	96	95.000	Microcebus_murinus
ENSMOCG00000020334	Tnrc6b	100	98.500	MGP_CAROLIEiJ_G0020043	Tnrc6b	97	98.500	Mus_caroli
ENSMOCG00000020334	Tnrc6b	100	98.500	ENSMUSG00000047888	Tnrc6b	97	98.500	Mus_musculus
ENSMOCG00000020334	Tnrc6b	100	98.500	MGP_PahariEiJ_G0020045	Tnrc6b	97	98.500	Mus_pahari
ENSMOCG00000020334	Tnrc6b	100	98.500	MGP_SPRETEiJ_G0020941	Tnrc6b	97	98.500	Mus_spretus
ENSMOCG00000020334	Tnrc6b	94	95.420	ENSMPUG00000016442	TNRC6B	96	95.000	Mustela_putorius_furo
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSMLUG00000008765	TNRC6B	96	96.000	Myotis_lucifugus
ENSMOCG00000020334	Tnrc6b	100	96.517	ENSNGAG00000021294	Tnrc6b	97	96.517	Nannospalax_galili
ENSMOCG00000020334	Tnrc6b	86	96.000	ENSNLEG00000015311	TNRC6B	100	90.777	Nomascus_leucogenys
ENSMOCG00000020334	Tnrc6b	90	94.000	ENSOPRG00000012054	TNRC6B	88	90.830	Ochotona_princeps
ENSMOCG00000020334	Tnrc6b	100	96.000	ENSODEG00000013146	TNRC6B	97	96.000	Octodon_degus
ENSMOCG00000020334	Tnrc6b	100	96.000	ENSOCUG00000016128	TNRC6B	97	96.000	Oryctolagus_cuniculus
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSOGAG00000011096	TNRC6B	96	96.000	Otolemur_garnettii
ENSMOCG00000020334	Tnrc6b	100	95.500	ENSOARG00000017238	TNRC6B	97	95.500	Ovis_aries
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSPPAG00000028514	TNRC6B	96	96.000	Pan_paniscus
ENSMOCG00000020334	Tnrc6b	97	95.500	ENSPPRG00000017741	TNRC6B	96	95.500	Panthera_pardus
ENSMOCG00000020334	Tnrc6b	97	86.367	ENSPTIG00000022064	TNRC6B	98	85.027	Panthera_tigris_altaica
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSPTRG00000047826	TNRC6B	96	96.000	Pan_troglodytes
ENSMOCG00000020334	Tnrc6b	96	96.000	ENSPANG00000009271	TNRC6B	96	96.000	Papio_anubis
ENSMOCG00000020334	Tnrc6b	97	92.000	ENSPSIG00000005318	TNRC6B	96	92.000	Pelodiscus_sinensis
ENSMOCG00000020334	Tnrc6b	100	97.500	ENSPEMG00000011403	Tnrc6b	97	97.500	Peromyscus_maniculatus_bairdii
ENSMOCG00000020334	Tnrc6b	96	89.000	ENSPCIG00000020347	TNRC6B	96	89.000	Phascolarctos_cinereus
ENSMOCG00000020334	Tnrc6b	68	58.511	ENSPFOG00000006033	-	93	58.257	Poecilia_formosa
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSPPYG00000011849	TNRC6B	96	96.000	Pongo_abelii
ENSMOCG00000020334	Tnrc6b	75	94.857	ENSPCAG00000008739	TNRC6B	72	94.857	Procavia_capensis
ENSMOCG00000020334	Tnrc6b	99	95.500	ENSPCOG00000020790	TNRC6B	96	95.500	Propithecus_coquereli
ENSMOCG00000020334	Tnrc6b	93	94.268	ENSPVAG00000004975	TNRC6B	94	94.268	Pteropus_vampyrus
ENSMOCG00000020334	Tnrc6b	62	80.208	ENSPNAG00000011713	tnrc6b	76	49.213	Pygocentrus_nattereri
ENSMOCG00000020334	Tnrc6b	100	98.500	ENSRNOG00000024907	Tnrc6b	97	98.500	Rattus_norvegicus
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSRBIG00000035576	TNRC6B	96	96.000	Rhinopithecus_bieti
ENSMOCG00000020334	Tnrc6b	97	96.000	ENSRROG00000031135	TNRC6B	96	96.000	Rhinopithecus_roxellana
ENSMOCG00000020334	Tnrc6b	96	96.000	ENSSBOG00000029743	TNRC6B	95	96.000	Saimiri_boliviensis_boliviensis
ENSMOCG00000020334	Tnrc6b	97	86.070	ENSSHAG00000009692	TNRC6B	96	86.567	Sarcophilus_harrisii
ENSMOCG00000020334	Tnrc6b	63	91.000	ENSSARG00000007971	-	66	91.000	Sorex_araneus
ENSMOCG00000020334	Tnrc6b	100	95.000	ENSSSCG00000000078	TNRC6B	97	95.000	Sus_scrofa
ENSMOCG00000020334	Tnrc6b	91	98.837	ENSTGUG00000010138	-	95	98.837	Taeniopygia_guttata
ENSMOCG00000020334	Tnrc6b	100	95.000	ENSTTRG00000011465	TNRC6B	96	95.000	Tursiops_truncatus
ENSMOCG00000020334	Tnrc6b	98	94.500	ENSUAMG00000007174	TNRC6B	99	89.705	Ursus_americanus
ENSMOCG00000020334	Tnrc6b	96	94.500	ENSUMAG00000014336	TNRC6B	96	94.500	Ursus_maritimus
ENSMOCG00000020334	Tnrc6b	67	100.000	ENSVPAG00000001467	TNRC6B	71	100.000	Vicugna_pacos
ENSMOCG00000020334	Tnrc6b	100	95.000	ENSVVUG00000007064	TNRC6B	97	95.000	Vulpes_vulpes