EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000020544 (Gene tree)
Gene ID: 101983720
Gene Symbol: Zic3
Alias: Ka
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 10860 bases
Position: chrX:13983313-13994172
Accession: 101983720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000023976	zf-C2H2	PF00096.26	1.8e-21	1	4
ENSMOCP00000023976	zf-C2H2	PF00096.26	1.8e-21	2	4
ENSMOCP00000023976	zf-C2H2	PF00096.26	1.8e-21	3	4
ENSMOCP00000023976	zf-C2H2	PF00096.26	1.8e-21	4	4
ENSMOCP00000023980	zf-C2H2	PF00096.26	2.8e-20	1	4
ENSMOCP00000023980	zf-C2H2	PF00096.26	2.8e-20	2	4
ENSMOCP00000023980	zf-C2H2	PF00096.26	2.8e-20	3	4
ENSMOCP00000023980	zf-C2H2	PF00096.26	2.8e-20	4	4
ENSMOCP00000023980	zf-met	PF12874.7	0.0004	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000027833	-	3691	XM_005358506	ENSMOCP00000023976	465 (aa)	XP_005358563	UPI00038BD8A6
ENSMOCT00000027837	-	1338	XM_013350476	ENSMOCP00000023980	445 (aa)	XP_013205930	-

Gene Model

Click here to download ENSMOCG00000020544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000020544's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000020544	Zic3	100	97.859	ENSG00000156925	ZIC3	100	97.859	Homo_sapiens
ENSMOCG00000020544	Zic3	100	98.073	ENSANAG00000019614	ZIC3	100	98.073	Aotus_nancymaae
ENSMOCG00000020544	Zic3	100	97.645	ENSCJAG00000013792	ZIC3	100	97.645	Callithrix_jacchus
ENSMOCG00000020544	Zic3	100	97.645	ENSCAFG00000018979	ZIC3	100	97.645	Canis_familiaris
ENSMOCG00000020544	Zic3	100	95.075	ENSTSYG00000003356	ZIC3	100	95.075	Carlito_syrichta
ENSMOCG00000020544	Zic3	53	98.374	ENSCPOG00000002374	ZIC3	100	98.374	Cavia_porcellus
ENSMOCG00000020544	Zic3	100	97.859	ENSCCAG00000025983	ZIC3	100	97.859	Cebus_capucinus
ENSMOCG00000020544	Zic3	100	97.859	ENSCATG00000036569	ZIC3	100	97.859	Cercocebus_atys
ENSMOCG00000020544	Zic3	100	98.498	ENSCLAG00000001934	ZIC3	100	98.498	Chinchilla_lanigera
ENSMOCG00000020544	Zic3	93	86.468	ENSCPBG00000026115	ZIC3	100	86.468	Chrysemys_picta_bellii
ENSMOCG00000020544	Zic3	100	97.645	ENSCANG00000017505	ZIC3	100	97.645	Colobus_angolensis_palliatus
ENSMOCG00000020544	Zic3	100	99.356	ENSCGRG00001024527	Zic3	100	99.356	Cricetulus_griseus_chok1gshd
ENSMOCG00000020544	Zic3	100	97.854	ENSDORG00000025481	Zic3	100	97.854	Dipodomys_ordii
ENSMOCG00000020544	Zic3	100	97.645	ENSFCAG00000025684	ZIC3	100	97.645	Felis_catus
ENSMOCG00000020544	Zic3	80	98.652	ENSFDAG00000014929	ZIC3	100	99.187	Fukomys_damarensis
ENSMOCG00000020544	Zic3	91	85.575	ENSGAGG00000004149	ZIC3	92	80.269	Gopherus_agassizii
ENSMOCG00000020544	Zic3	100	97.859	ENSGGOG00000011914	ZIC3	100	97.859	Gorilla_gorilla
ENSMOCG00000020544	Zic3	100	97.854	ENSHGLG00000006298	ZIC3	100	97.854	Heterocephalus_glaber_female
ENSMOCG00000020544	Zic3	68	68.153	ENSHGLG00100002829	ZIC3	100	77.070	Heterocephalus_glaber_male
ENSMOCG00000020544	Zic3	100	98.927	ENSJJAG00000022714	Zic3	100	98.927	Jaculus_jaculus
ENSMOCG00000020544	Zic3	100	77.039	ENSLACG00000014597	ZIC3	100	77.039	Latimeria_chalumnae
ENSMOCG00000020544	Zic3	88	93.431	ENSLAFG00000007048	ZIC3	100	92.947	Loxodonta_africana
ENSMOCG00000020544	Zic3	100	97.859	ENSMFAG00000027018	ZIC3	100	97.859	Macaca_fascicularis
ENSMOCG00000020544	Zic3	100	92.779	ENSMMUG00000002023	ZIC3	100	92.779	Macaca_mulatta
ENSMOCG00000020544	Zic3	100	97.859	ENSMNEG00000040682	ZIC3	100	97.859	Macaca_nemestrina
ENSMOCG00000020544	Zic3	100	97.859	ENSMLEG00000004378	ZIC3	100	97.859	Mandrillus_leucophaeus
ENSMOCG00000020544	Zic3	100	99.571	ENSMAUG00000009402	Zic3	100	99.571	Mesocricetus_auratus
ENSMOCG00000020544	Zic3	100	98.073	ENSMICG00000042529	ZIC3	100	98.073	Microcebus_murinus
ENSMOCG00000020544	Zic3	100	99.356	MGP_CAROLIEiJ_G0033101	Zic3	100	100.000	Mus_caroli
ENSMOCG00000020544	Zic3	100	99.356	ENSMUSG00000067860	Zic3	100	100.000	Mus_musculus
ENSMOCG00000020544	Zic3	100	99.356	MGP_PahariEiJ_G0031644	Zic3	100	100.000	Mus_pahari
ENSMOCG00000020544	Zic3	100	99.356	MGP_SPRETEiJ_G0034256	Zic3	100	100.000	Mus_spretus
ENSMOCG00000020544	Zic3	100	98.498	ENSNGAG00000023346	Zic3	100	98.498	Nannospalax_galili
ENSMOCG00000020544	Zic3	79	98.221	ENSNLEG00000003005	-	100	98.221	Nomascus_leucogenys
ENSMOCG00000020544	Zic3	100	98.283	ENSODEG00000005556	ZIC3	100	98.283	Octodon_degus
ENSMOCG00000020544	Zic3	100	97.859	ENSPPAG00000030013	ZIC3	100	97.859	Pan_paniscus
ENSMOCG00000020544	Zic3	100	97.645	ENSPPRG00000010839	ZIC3	100	97.645	Panthera_pardus
ENSMOCG00000020544	Zic3	100	97.859	ENSPTRG00000043849	ZIC3	100	97.859	Pan_troglodytes
ENSMOCG00000020544	Zic3	100	97.859	ENSPANG00000011357	ZIC3	100	97.859	Papio_anubis
ENSMOCG00000020544	Zic3	100	73.662	ENSPKIG00000017705	zic3	100	73.662	Paramormyrops_kingsleyae
ENSMOCG00000020544	Zic3	62	90.411	ENSPSIG00000011896	ZIC3	99	90.411	Pelodiscus_sinensis
ENSMOCG00000020544	Zic3	100	99.571	ENSPEMG00000022168	Zic3	100	99.571	Peromyscus_maniculatus_bairdii
ENSMOCG00000020544	Zic3	100	97.645	ENSPCOG00000021557	ZIC3	100	97.645	Propithecus_coquereli
ENSMOCG00000020544	Zic3	100	98.927	ENSRNOG00000000861	Zic3	100	98.927	Rattus_norvegicus
ENSMOCG00000020544	Zic3	100	97.645	ENSRBIG00000030660	ZIC3	100	97.645	Rhinopithecus_bieti
ENSMOCG00000020544	Zic3	100	97.645	ENSRROG00000028410	ZIC3	100	97.645	Rhinopithecus_roxellana
ENSMOCG00000020544	Zic3	100	98.073	ENSSBOG00000024684	ZIC3	100	98.073	Saimiri_boliviensis_boliviensis
ENSMOCG00000020544	Zic3	99	74.624	ENSSFOG00015011731	zic3	100	74.624	Scleropages_formosus
ENSMOCG00000020544	Zic3	99	69.032	ENSSFOG00015008079	zic3	86	80.580	Scleropages_formosus
ENSMOCG00000020544	Zic3	83	83.206	ENSTGUG00000002155	ZIC3	100	83.206	Taeniopygia_guttata
ENSMOCG00000020544	Zic3	100	97.645	ENSVVUG00000021378	ZIC3	100	97.645	Vulpes_vulpes
ENSMOCG00000020544	Zic3	100	77.350	ENSXETG00000024458	zic3	100	77.350	Xenopus_tropicalis