EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000020932 (Gene tree)
Gene ID: 101991908
Gene Symbol: Rbfox1
Alias: A2bp|A2bp1|FOX1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 609432 bases
Position: chr7:7804942-8414373
Accession: 101991908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000024556	Fox-1_C	PF12414.8	9.9e-43	1	1
ENSMOCP00000024551	Fox-1_C	PF12414.8	1e-42	1	1
ENSMOCP00000024552	Fox-1_C	PF12414.8	1.2e-40	1	1
ENSMOCP00000024556	RRM_1	PF00076.22	2.8e-18	1	1
ENSMOCP00000024552	RRM_1	PF00076.22	2.9e-18	1	1
ENSMOCP00000024551	RRM_1	PF00076.22	2.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000028414	-	1254	-	ENSMOCP00000024552	417 (aa)	-	UPI00038C475E
ENSMOCT00000028418	-	3050	XM_013347232	ENSMOCP00000024556	383 (aa)	XP_013202686	-
ENSMOCT00000028413	-	1191	XM_013347234	ENSMOCP00000024551	396 (aa)	XP_013202688	-

Gene Model

Click here to download ENSMOCG00000020932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000020932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000020932	Rbfox1	99	61.013	ENSMOCG00000009327	Rbfox2	100	59.466
ENSMOCG00000020932	Rbfox1	95	57.246	ENSMOCG00000015373	Rbfox3	100	61.183

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000020932	Rbfox1	100	98.237	ENSG00000078328	RBFOX1	100	98.237	Homo_sapiens
ENSMOCG00000020932	Rbfox1	100	76.145	ENSAPOG00000003197	rbfox1	100	75.904	Acanthochromis_polyacanthus
ENSMOCG00000020932	Rbfox1	60	94.000	ENSAMEG00000008605	RBFOX1	100	94.000	Ailuropoda_melanoleuca
ENSMOCG00000020932	Rbfox1	70	64.527	ENSACIG00000005478	rbfox1	68	64.983	Amphilophus_citrinellus
ENSMOCG00000020932	Rbfox1	73	70.667	ENSAOCG00000008283	rbfox1	98	69.551	Amphiprion_ocellaris
ENSMOCG00000020932	Rbfox1	98	70.899	ENSAPEG00000010636	rbfox1	100	70.789	Amphiprion_percula
ENSMOCG00000020932	Rbfox1	73	69.205	ENSATEG00000007513	rbfox1	97	68.167	Anabas_testudineus
ENSMOCG00000020932	Rbfox1	100	93.750	ENSAPLG00000013263	RBFOX1	97	93.573	Anas_platyrhynchos
ENSMOCG00000020932	Rbfox1	100	87.597	ENSACAG00000004013	RBFOX1	100	86.466	Anolis_carolinensis
ENSMOCG00000020932	Rbfox1	100	95.584	ENSANAG00000029527	RBFOX1	98	97.194	Aotus_nancymaae
ENSMOCG00000020932	Rbfox1	57	88.018	ENSAMXG00000002431	rbfox1	65	87.500	Astyanax_mexicanus
ENSMOCG00000020932	Rbfox1	100	95.325	ENSBTAG00000007210	RBFOX1	98	96.939	Bos_taurus
ENSMOCG00000020932	Rbfox1	100	97.656	ENSCJAG00000017351	RBFOX1	100	97.129	Callithrix_jacchus
ENSMOCG00000020932	Rbfox1	100	97.608	ENSCAFG00000019082	RBFOX1	100	97.608	Canis_familiaris
ENSMOCG00000020932	Rbfox1	71	96.959	ENSCAFG00020024881	RBFOX1	83	96.959	Canis_lupus_dingo
ENSMOCG00000020932	Rbfox1	100	95.325	ENSCHIG00000023549	RBFOX1	98	96.939	Capra_hircus
ENSMOCG00000020932	Rbfox1	100	95.325	ENSTSYG00000005334	RBFOX1	100	97.429	Carlito_syrichta
ENSMOCG00000020932	Rbfox1	100	97.396	ENSCAPG00000017669	RBFOX1	100	97.423	Cavia_aperea
ENSMOCG00000020932	Rbfox1	100	97.481	ENSCPOG00000011314	RBFOX1	100	97.481	Cavia_porcellus
ENSMOCG00000020932	Rbfox1	100	97.129	ENSCCAG00000023031	RBFOX1	100	97.129	Cebus_capucinus
ENSMOCG00000020932	Rbfox1	100	97.608	ENSCATG00000033816	RBFOX1	100	97.608	Cercocebus_atys
ENSMOCG00000020932	Rbfox1	100	97.396	ENSCLAG00000012761	RBFOX1	100	97.229	Chinchilla_lanigera
ENSMOCG00000020932	Rbfox1	85	96.319	ENSCSAG00000008739	RBFOX1	89	95.224	Chlorocebus_sabaeus
ENSMOCG00000020932	Rbfox1	100	75.598	ENSCHOG00000012843	RBFOX1	100	75.598	Choloepus_hoffmanni
ENSMOCG00000020932	Rbfox1	100	93.750	ENSCPBG00000026626	RBFOX1	98	93.112	Chrysemys_picta_bellii
ENSMOCG00000020932	Rbfox1	100	97.608	ENSCANG00000033125	RBFOX1	100	97.608	Colobus_angolensis_palliatus
ENSMOCG00000020932	Rbfox1	100	99.520	ENSCGRG00001013729	Rbfox1	100	99.520	Cricetulus_griseus_chok1gshd
ENSMOCG00000020932	Rbfox1	100	99.520	ENSCGRG00000003272	Rbfox1	100	99.520	Cricetulus_griseus_crigri
ENSMOCG00000020932	Rbfox1	98	71.285	ENSCSEG00000008840	rbfox1	100	71.285	Cynoglossus_semilaevis
ENSMOCG00000020932	Rbfox1	100	81.039	ENSDARG00000014746	rbfox1	100	85.854	Danio_rerio
ENSMOCG00000020932	Rbfox1	100	97.396	ENSDNOG00000043612	RBFOX1	94	97.179	Dasypus_novemcinctus
ENSMOCG00000020932	Rbfox1	100	95.596	ENSDORG00000010024	Rbfox1	100	93.052	Dipodomys_ordii
ENSMOCG00000020932	Rbfox1	100	78.417	ENSETEG00000003771	RBFOX1	100	78.417	Echinops_telfairi
ENSMOCG00000020932	Rbfox1	100	98.177	ENSEASG00005011599	RBFOX1	98	97.704	Equus_asinus_asinus
ENSMOCG00000020932	Rbfox1	100	95.844	ENSECAG00000012667	RBFOX1	98	97.284	Equus_caballus
ENSMOCG00000020932	Rbfox1	83	68.831	ENSELUG00000013096	rbfox1	99	65.145	Esox_lucius
ENSMOCG00000020932	Rbfox1	100	97.917	ENSFCAG00000025322	RBFOX1	89	97.686	Felis_catus
ENSMOCG00000020932	Rbfox1	83	93.396	ENSFALG00000004027	RBFOX1	100	91.291	Ficedula_albicollis
ENSMOCG00000020932	Rbfox1	100	97.733	ENSFDAG00000007388	RBFOX1	100	97.733	Fukomys_damarensis
ENSMOCG00000020932	Rbfox1	100	92.344	ENSGALG00000034325	RBFOX1	100	92.344	Gallus_gallus
ENSMOCG00000020932	Rbfox1	98	93.899	ENSGAGG00000023681	RBFOX1	100	93.899	Gopherus_agassizii
ENSMOCG00000020932	Rbfox1	100	97.608	ENSGGOG00000016871	-	100	97.608	Gorilla_gorilla
ENSMOCG00000020932	Rbfox1	100	97.481	ENSHGLG00000016944	RBFOX1	100	97.481	Heterocephalus_glaber_female
ENSMOCG00000020932	Rbfox1	100	97.481	ENSHGLG00100003272	RBFOX1	100	97.481	Heterocephalus_glaber_male
ENSMOCG00000020932	Rbfox1	88	70.893	ENSHCOG00000016419	rbfox1	91	70.977	Hippocampus_comes
ENSMOCG00000020932	Rbfox1	98	83.511	ENSIPUG00000015215	rbfox1	100	83.511	Ictalurus_punctatus
ENSMOCG00000020932	Rbfox1	100	96.977	ENSSTOG00000000322	RBFOX1	100	96.977	Ictidomys_tridecemlineatus
ENSMOCG00000020932	Rbfox1	100	94.778	ENSJJAG00000002575	Rbfox1	100	94.484	Jaculus_jaculus
ENSMOCG00000020932	Rbfox1	99	73.077	ENSLBEG00000014659	rbfox1	99	72.457	Labrus_bergylta
ENSMOCG00000020932	Rbfox1	100	86.305	ENSLOCG00000006675	rbfox1	99	86.005	Lepisosteus_oculatus
ENSMOCG00000020932	Rbfox1	80	98.377	ENSLAFG00000011480	RBFOX1	100	98.701	Loxodonta_africana
ENSMOCG00000020932	Rbfox1	100	97.368	ENSMFAG00000036447	RBFOX1	100	97.368	Macaca_fascicularis
ENSMOCG00000020932	Rbfox1	100	97.917	ENSMMUG00000003458	RBFOX1	100	97.368	Macaca_mulatta
ENSMOCG00000020932	Rbfox1	100	97.368	ENSMNEG00000032034	RBFOX1	100	97.368	Macaca_nemestrina
ENSMOCG00000020932	Rbfox1	100	97.608	ENSMLEG00000015382	RBFOX1	100	97.608	Mandrillus_leucophaeus
ENSMOCG00000020932	Rbfox1	98	74.490	ENSMAMG00000003142	rbfox1	100	75.000	Mastacembelus_armatus
ENSMOCG00000020932	Rbfox1	72	88.043	ENSMGAG00000008606	RBFOX1	96	87.410	Meleagris_gallopavo
ENSMOCG00000020932	Rbfox1	100	59.269	ENSMAUG00000020570	Rbfox1	99	57.722	Mesocricetus_auratus
ENSMOCG00000020932	Rbfox1	100	90.625	ENSMICG00000034286	RBFOX1	100	88.586	Microcebus_murinus
ENSMOCG00000020932	Rbfox1	89	70.435	ENSMMOG00000009716	rbfox1	86	70.796	Mola_mola
ENSMOCG00000020932	Rbfox1	83	94.357	ENSMODG00000005826	RBFOX1	90	94.357	Monodelphis_domestica
ENSMOCG00000020932	Rbfox1	100	75.550	ENSMALG00000003337	rbfox1	100	75.550	Monopterus_albus
ENSMOCG00000020932	Rbfox1	100	99.760	MGP_CAROLIEiJ_G0020427	Rbfox1	100	99.760	Mus_caroli
ENSMOCG00000020932	Rbfox1	100	99.520	ENSMUSG00000008658	Rbfox1	100	100.000	Mus_musculus
ENSMOCG00000020932	Rbfox1	100	99.760	MGP_PahariEiJ_G0016135	Rbfox1	100	99.760	Mus_pahari
ENSMOCG00000020932	Rbfox1	100	99.281	MGP_SPRETEiJ_G0021321	Rbfox1	100	99.281	Mus_spretus
ENSMOCG00000020932	Rbfox1	85	96.012	ENSMPUG00000014822	RBFOX1	91	93.333	Mustela_putorius_furo
ENSMOCG00000020932	Rbfox1	80	99.023	ENSMLUG00000015896	RBFOX1	100	99.023	Myotis_lucifugus
ENSMOCG00000020932	Rbfox1	100	98.325	ENSNGAG00000023276	Rbfox1	100	98.325	Nannospalax_galili
ENSMOCG00000020932	Rbfox1	99	61.179	ENSNBRG00000011084	rbfox1	98	59.302	Neolamprologus_brichardi
ENSMOCG00000020932	Rbfox1	100	97.368	ENSNLEG00000010017	-	100	97.368	Nomascus_leucogenys
ENSMOCG00000020932	Rbfox1	100	79.904	ENSMEUG00000012525	RBFOX1	100	79.904	Notamacropus_eugenii
ENSMOCG00000020932	Rbfox1	100	79.187	ENSOPRG00000006199	-	100	77.990	Ochotona_princeps
ENSMOCG00000020932	Rbfox1	100	96.725	ENSODEG00000013166	RBFOX1	100	96.725	Octodon_degus
ENSMOCG00000020932	Rbfox1	85	93.252	ENSOANG00000002379	RBFOX1	89	92.239	Ornithorhynchus_anatinus
ENSMOCG00000020932	Rbfox1	55	95.283	ENSOCUG00000001205	-	100	92.444	Oryctolagus_cuniculus
ENSMOCG00000020932	Rbfox1	100	97.917	ENSOGAG00000025535	RBFOX1	100	96.222	Otolemur_garnettii
ENSMOCG00000020932	Rbfox1	63	83.936	ENSOARG00000005135	RBFOX1	100	83.200	Ovis_aries
ENSMOCG00000020932	Rbfox1	100	98.177	ENSPPAG00000036238	-	100	98.196	Pan_paniscus
ENSMOCG00000020932	Rbfox1	100	97.368	ENSPPRG00000006546	RBFOX1	100	97.368	Panthera_pardus
ENSMOCG00000020932	Rbfox1	100	86.458	ENSPTIG00000021154	RBFOX1	99	85.604	Panthera_tigris_altaica
ENSMOCG00000020932	Rbfox1	100	97.608	ENSPTRG00000007744	RBFOX1	100	97.608	Pan_troglodytes
ENSMOCG00000020932	Rbfox1	100	97.608	ENSPANG00000026500	RBFOX1	100	97.608	Papio_anubis
ENSMOCG00000020932	Rbfox1	74	82.867	ENSPKIG00000019353	rbfox1	86	82.534	Paramormyrops_kingsleyae
ENSMOCG00000020932	Rbfox1	99	82.552	ENSPKIG00000009667	-	95	82.609	Paramormyrops_kingsleyae
ENSMOCG00000020932	Rbfox1	100	93.750	ENSPSIG00000006523	RBFOX1	98	92.875	Pelodiscus_sinensis
ENSMOCG00000020932	Rbfox1	100	99.760	ENSPEMG00000017607	Rbfox1	100	99.760	Peromyscus_maniculatus_bairdii
ENSMOCG00000020932	Rbfox1	76	92.069	ENSPCIG00000026887	RBFOX1	100	92.069	Phascolarctos_cinereus
ENSMOCG00000020932	Rbfox1	85	96.319	ENSPPYG00000007079	-	91	93.611	Pongo_abelii
ENSMOCG00000020932	Rbfox1	90	89.153	ENSPCAG00000002630	RBFOX1	100	89.153	Procavia_capensis
ENSMOCG00000020932	Rbfox1	100	97.129	ENSPCOG00000025687	RBFOX1	100	97.129	Propithecus_coquereli
ENSMOCG00000020932	Rbfox1	100	93.062	ENSPVAG00000013467	RBFOX1	100	93.062	Pteropus_vampyrus
ENSMOCG00000020932	Rbfox1	98	81.061	ENSPNAG00000023109	rbfox1	100	81.061	Pygocentrus_nattereri
ENSMOCG00000020932	Rbfox1	100	99.478	ENSRNOG00000002827	Rbfox1	100	97.122	Rattus_norvegicus
ENSMOCG00000020932	Rbfox1	100	98.177	ENSRBIG00000044478	RBFOX1	100	98.196	Rhinopithecus_bieti
ENSMOCG00000020932	Rbfox1	100	97.608	ENSRROG00000044411	RBFOX1	100	97.608	Rhinopithecus_roxellana
ENSMOCG00000020932	Rbfox1	100	97.656	ENSSBOG00000033726	RBFOX1	98	96.692	Saimiri_boliviensis_boliviensis
ENSMOCG00000020932	Rbfox1	100	93.229	ENSSHAG00000009257	RBFOX1	100	91.940	Sarcophilus_harrisii
ENSMOCG00000020932	Rbfox1	100	68.041	ENSSFOG00015023675	rbfox1	93	87.778	Scleropages_formosus
ENSMOCG00000020932	Rbfox1	89	70.201	ENSSFOG00015009955	-	87	67.553	Scleropages_formosus
ENSMOCG00000020932	Rbfox1	100	76.559	ENSSMAG00000015505	rbfox1	96	72.577	Scophthalmus_maximus
ENSMOCG00000020932	Rbfox1	99	74.160	ENSSDUG00000016413	rbfox1	99	73.724	Seriola_dumerili
ENSMOCG00000020932	Rbfox1	88	71.765	ENSSLDG00000009353	rbfox1	97	71.429	Seriola_lalandi_dorsalis
ENSMOCG00000020932	Rbfox1	88	82.353	ENSSPUG00000009732	RBFOX1	87	82.405	Sphenodon_punctatus
ENSMOCG00000020932	Rbfox1	99	76.000	ENSSPAG00000009723	rbfox1	100	75.369	Stegastes_partitus
ENSMOCG00000020932	Rbfox1	97	97.305	ENSSSCG00000007917	RBFOX1	98	96.790	Sus_scrofa
ENSMOCG00000020932	Rbfox1	100	93.750	ENSTGUG00000004562	RBFOX1	100	93.573	Taeniopygia_guttata
ENSMOCG00000020932	Rbfox1	99	75.689	ENSTRUG00000020940	rbfox1	99	75.123	Takifugu_rubripes
ENSMOCG00000020932	Rbfox1	70	57.006	ENSTNIG00000002567	rbfox1	100	58.599	Tetraodon_nigroviridis
ENSMOCG00000020932	Rbfox1	81	86.207	ENSTBEG00000009169	-	81	86.207	Tupaia_belangeri
ENSMOCG00000020932	Rbfox1	100	96.890	ENSTTRG00000005700	RBFOX1	100	96.890	Tursiops_truncatus
ENSMOCG00000020932	Rbfox1	99	93.734	ENSUAMG00000024633	RBFOX1	100	91.436	Ursus_americanus
ENSMOCG00000020932	Rbfox1	99	84.595	ENSUMAG00000003579	RBFOX1	100	82.620	Ursus_maritimus
ENSMOCG00000020932	Rbfox1	81	98.701	ENSVPAG00000001284	RBFOX1	81	98.701	Vicugna_pacos
ENSMOCG00000020932	Rbfox1	100	97.917	ENSVVUG00000017311	RBFOX1	96	90.909	Vulpes_vulpes