EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000021026 (Gene tree)
Gene ID: 101987464
Gene Symbol: Prdm12
Alias: LOC381359
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 15589 bases
Position: chr4:45342728-45358316
Accession: 101987464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000024695	zf-C2H2	PF00096.26	9e-13	1	2
ENSMOCP00000024695	zf-C2H2	PF00096.26	9e-13	2	2
ENSMOCP00000024691	zf-C2H2	PF00096.26	9.7e-13	1	2
ENSMOCP00000024691	zf-C2H2	PF00096.26	9.7e-13	2	2
ENSMOCP00000024693	zf-C2H2	PF00096.26	1.2e-12	1	2
ENSMOCP00000024693	zf-C2H2	PF00096.26	1.2e-12	2	2
ENSMOCP00000024695	zf-met	PF12874.7	7.9e-08	1	1
ENSMOCP00000024691	zf-met	PF12874.7	1e-07	1	1
ENSMOCP00000024693	zf-met	PF12874.7	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000028554	-	1182	-	ENSMOCP00000024691	393 (aa)	-	-
ENSMOCT00000028556	-	1242	XM_005346719	ENSMOCP00000024693	413 (aa)	XP_005346776	-
ENSMOCT00000028558	-	1098	-	ENSMOCP00000024695	366 (aa)	-	-

Gene Model

Click here to download ENSMOCG00000021026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000021026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000021026	Prdm12	51	41.333	ENSMOCG00000017860	Zkscan3	52	41.333
ENSMOCG00000021026	Prdm12	71	47.273	ENSMOCG00000016267	Prdm5	94	47.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000021026	Prdm12	93	97.953	ENSG00000130711	PRDM12	99	92.877	Homo_sapiens
ENSMOCG00000021026	Prdm12	90	79.772	ENSAPOG00000016051	prdm12b	99	75.526	Acanthochromis_polyacanthus
ENSMOCG00000021026	Prdm12	92	65.722	ENSAPOG00000018234	-	99	65.193	Acanthochromis_polyacanthus
ENSMOCG00000021026	Prdm12	88	94.118	ENSAMEG00000016234	PRDM12	99	94.118	Ailuropoda_melanoleuca
ENSMOCG00000021026	Prdm12	90	80.115	ENSACIG00000019578	prdm12b	97	78.297	Amphilophus_citrinellus
ENSMOCG00000021026	Prdm12	93	78.142	ENSACIG00000005193	-	99	76.533	Amphilophus_citrinellus
ENSMOCG00000021026	Prdm12	90	80.980	ENSAOCG00000015040	prdm12b	99	76.862	Amphiprion_ocellaris
ENSMOCG00000021026	Prdm12	89	79.762	ENSAPEG00000022849	-	89	79.009	Amphiprion_percula
ENSMOCG00000021026	Prdm12	90	81.686	ENSAPEG00000015092	prdm12b	99	77.480	Amphiprion_percula
ENSMOCG00000021026	Prdm12	92	81.287	ENSATEG00000014595	-	99	81.287	Anabas_testudineus
ENSMOCG00000021026	Prdm12	93	98.235	ENSANAG00000020616	PRDM12	100	98.235	Aotus_nancymaae
ENSMOCG00000021026	Prdm12	93	81.871	ENSACLG00000011876	prdm12b	100	78.512	Astatotilapia_calliptera
ENSMOCG00000021026	Prdm12	89	82.164	ENSACLG00000007631	-	87	82.164	Astatotilapia_calliptera
ENSMOCG00000021026	Prdm12	90	88.623	ENSAMXG00000033665	prdm12b	96	84.916	Astyanax_mexicanus
ENSMOCG00000021026	Prdm12	93	82.596	ENSAMXG00000008540	PRDM12	99	79.167	Astyanax_mexicanus
ENSMOCG00000021026	Prdm12	93	99.123	ENSBTAG00000023797	PRDM12	98	96.875	Bos_taurus
ENSMOCG00000021026	Prdm12	93	98.246	ENSCJAG00000020540	PRDM12	98	96.023	Callithrix_jacchus
ENSMOCG00000021026	Prdm12	82	97.659	ENSCAFG00000023076	PRDM12	98	93.671	Canis_familiaris
ENSMOCG00000021026	Prdm12	93	98.830	ENSCAFG00020024046	PRDM12	99	95.265	Canis_lupus_dingo
ENSMOCG00000021026	Prdm12	93	98.830	ENSCHIG00000025005	PRDM12	98	96.045	Capra_hircus
ENSMOCG00000021026	Prdm12	93	92.353	ENSCPOG00000005901	PRDM12	95	98.083	Cavia_porcellus
ENSMOCG00000021026	Prdm12	93	98.246	ENSCCAG00000037485	PRDM12	98	95.763	Cebus_capucinus
ENSMOCG00000021026	Prdm12	93	98.246	ENSCATG00000020327	PRDM12	98	95.763	Cercocebus_atys
ENSMOCG00000021026	Prdm12	91	97.904	ENSCLAG00000005499	PRDM12	92	97.904	Chinchilla_lanigera
ENSMOCG00000021026	Prdm12	93	98.246	ENSCSAG00000014756	PRDM12	99	94.708	Chlorocebus_sabaeus
ENSMOCG00000021026	Prdm12	93	92.962	ENSCPBG00000022628	PRDM12	99	91.168	Chrysemys_picta_bellii
ENSMOCG00000021026	Prdm12	93	99.708	ENSCGRG00001015005	Prdm12	98	96.089	Cricetulus_griseus_chok1gshd
ENSMOCG00000021026	Prdm12	90	78.063	ENSCVAG00000000944	-	98	73.698	Cyprinodon_variegatus
ENSMOCG00000021026	Prdm12	90	83.136	ENSCVAG00000017166	prdm12b	98	78.261	Cyprinodon_variegatus
ENSMOCG00000021026	Prdm12	92	85.838	ENSDARG00000007430	prdm12b	98	84.123	Danio_rerio
ENSMOCG00000021026	Prdm12	93	98.538	ENSDNOG00000042302	PRDM12	97	96.591	Dasypus_novemcinctus
ENSMOCG00000021026	Prdm12	88	62.393	ENSEBUG00000016780	prdm12b	78	63.818	Eptatretus_burgeri
ENSMOCG00000021026	Prdm12	93	98.538	ENSEASG00005008472	PRDM12	98	95.763	Equus_asinus_asinus
ENSMOCG00000021026	Prdm12	93	98.246	ENSECAG00000005933	PRDM12	98	95.480	Equus_caballus
ENSMOCG00000021026	Prdm12	92	84.330	ENSELUG00000009905	prdm12b	99	81.793	Esox_lucius
ENSMOCG00000021026	Prdm12	89	83.642	ENSELUG00000013674	PRDM12	99	77.500	Esox_lucius
ENSMOCG00000021026	Prdm12	93	98.830	ENSFCAG00000043086	PRDM12	98	96.328	Felis_catus
ENSMOCG00000021026	Prdm12	93	93.255	ENSFALG00000001445	PRDM12	89	90.909	Ficedula_albicollis
ENSMOCG00000021026	Prdm12	89	82.789	ENSFHEG00000003944	prdm12b	100	76.738	Fundulus_heteroclitus
ENSMOCG00000021026	Prdm12	90	79.592	ENSFHEG00000007746	-	97	75.401	Fundulus_heteroclitus
ENSMOCG00000021026	Prdm12	91	82.583	ENSGMOG00000011797	prdm12b	99	79.772	Gadus_morhua
ENSMOCG00000021026	Prdm12	93	93.255	ENSGALG00000003895	PRDM12	99	91.453	Gallus_gallus
ENSMOCG00000021026	Prdm12	91	82.596	ENSGAFG00000010827	prdm12b	99	78.108	Gambusia_affinis
ENSMOCG00000021026	Prdm12	93	82.235	ENSGACG00000016713	prdm12b	96	81.006	Gasterosteus_aculeatus
ENSMOCG00000021026	Prdm12	93	93.255	ENSGAGG00000014083	PRDM12	99	91.453	Gopherus_agassizii
ENSMOCG00000021026	Prdm12	93	97.661	ENSGGOG00000010568	PRDM12	98	94.134	Gorilla_gorilla
ENSMOCG00000021026	Prdm12	89	82.164	ENSHBUG00000022537	-	80	82.164	Haplochromis_burtoni
ENSMOCG00000021026	Prdm12	93	80.170	ENSHBUG00000022878	prdm12b	100	77.807	Haplochromis_burtoni
ENSMOCG00000021026	Prdm12	93	97.661	ENSHGLG00000013939	PRDM12	98	94.382	Heterocephalus_glaber_female
ENSMOCG00000021026	Prdm12	89	81.287	ENSHCOG00000003663	prdm12b	99	75.194	Hippocampus_comes
ENSMOCG00000021026	Prdm12	91	76.540	ENSHCOG00000021167	-	98	74.648	Hippocampus_comes
ENSMOCG00000021026	Prdm12	93	79.300	ENSIPUG00000019544	PRDM12	99	76.923	Ictalurus_punctatus
ENSMOCG00000021026	Prdm12	90	87.425	ENSIPUG00000017053	prdm12b	97	83.380	Ictalurus_punctatus
ENSMOCG00000021026	Prdm12	92	99.408	ENSSTOG00000005986	PRDM12	90	97.965	Ictidomys_tridecemlineatus
ENSMOCG00000021026	Prdm12	90	99.091	ENSJJAG00000005424	Prdm12	100	99.091	Jaculus_jaculus
ENSMOCG00000021026	Prdm12	88	81.957	ENSKMAG00000021205	-	92	81.957	Kryptolebias_marmoratus
ENSMOCG00000021026	Prdm12	89	78.492	ENSKMAG00000016921	prdm12b	93	76.253	Kryptolebias_marmoratus
ENSMOCG00000021026	Prdm12	89	84.132	ENSLBEG00000017769	prdm12b	99	77.748	Labrus_bergylta
ENSMOCG00000021026	Prdm12	89	81.602	ENSLBEG00000007776	-	97	76.839	Labrus_bergylta
ENSMOCG00000021026	Prdm12	93	90.294	ENSLACG00000017560	PRDM12	99	88.286	Latimeria_chalumnae
ENSMOCG00000021026	Prdm12	91	86.431	ENSLOCG00000005429	prdm12b	96	85.345	Lepisosteus_oculatus
ENSMOCG00000021026	Prdm12	93	97.126	ENSLAFG00000006979	PRDM12	95	95.225	Loxodonta_africana
ENSMOCG00000021026	Prdm12	93	98.246	ENSMFAG00000040322	PRDM12	95	96.830	Macaca_fascicularis
ENSMOCG00000021026	Prdm12	93	98.246	ENSMNEG00000037234	PRDM12	98	95.763	Macaca_nemestrina
ENSMOCG00000021026	Prdm12	89	81.548	ENSMAMG00000018988	-	86	81.845	Mastacembelus_armatus
ENSMOCG00000021026	Prdm12	90	82.405	ENSMAMG00000013212	prdm12b	96	79.778	Mastacembelus_armatus
ENSMOCG00000021026	Prdm12	89	82.164	ENSMZEG00005000415	PRDM12	86	82.164	Maylandia_zebra
ENSMOCG00000021026	Prdm12	93	93.255	ENSMGAG00000005438	PRDM12	98	92.486	Meleagris_gallopavo
ENSMOCG00000021026	Prdm12	93	99.413	ENSMAUG00000013040	Prdm12	99	94.231	Mesocricetus_auratus
ENSMOCG00000021026	Prdm12	93	98.256	ENSMICG00000015480	PRDM12	96	97.695	Microcebus_murinus
ENSMOCG00000021026	Prdm12	93	94.721	ENSMODG00000012108	PRDM12	98	93.660	Monodelphis_domestica
ENSMOCG00000021026	Prdm12	93	69.253	ENSMALG00000021901	prdm12b	99	67.116	Monopterus_albus
ENSMOCG00000021026	Prdm12	93	99.415	MGP_CAROLIEiJ_G0023414	Prdm12	98	96.348	Mus_caroli
ENSMOCG00000021026	Prdm12	93	99.415	ENSMUSG00000079466	Prdm12	98	96.348	Mus_musculus
ENSMOCG00000021026	Prdm12	93	99.415	MGP_PahariEiJ_G0024871	Prdm12	98	96.348	Mus_pahari
ENSMOCG00000021026	Prdm12	93	99.415	MGP_SPRETEiJ_G0024331	Prdm12	98	96.348	Mus_spretus
ENSMOCG00000021026	Prdm12	93	96.491	ENSNGAG00000018480	Prdm12	99	94.286	Nannospalax_galili
ENSMOCG00000021026	Prdm12	90	76.901	ENSNBRG00000024312	-	99	74.790	Neolamprologus_brichardi
ENSMOCG00000021026	Prdm12	90	80.460	ENSNBRG00000006727	prdm12b	100	77.188	Neolamprologus_brichardi
ENSMOCG00000021026	Prdm12	93	83.871	ENSMEUG00000003828	PRDM12	98	82.997	Notamacropus_eugenii
ENSMOCG00000021026	Prdm12	90	97.576	ENSOPRG00000008680	PRDM12	100	97.576	Ochotona_princeps
ENSMOCG00000021026	Prdm12	93	98.246	ENSODEG00000016282	PRDM12	64	98.525	Octodon_degus
ENSMOCG00000021026	Prdm12	56	96.078	ENSOANG00000001043	PRDM12	99	92.093	Ornithorhynchus_anatinus
ENSMOCG00000021026	Prdm12	86	92.332	ENSOCUG00000008241	PRDM12	100	92.332	Oryctolagus_cuniculus
ENSMOCG00000021026	Prdm12	89	80.059	ENSORLG00000017558	-	97	74.868	Oryzias_latipes
ENSMOCG00000021026	Prdm12	93	80.168	ENSORLG00000007114	prdm12b	99	78.191	Oryzias_latipes
ENSMOCG00000021026	Prdm12	89	79.825	ENSORLG00020013167	-	97	74.670	Oryzias_latipes_hni
ENSMOCG00000021026	Prdm12	90	81.268	ENSORLG00020019565	prdm12b	99	78.042	Oryzias_latipes_hni
ENSMOCG00000021026	Prdm12	90	80.980	ENSORLG00015007621	prdm12b	99	77.660	Oryzias_latipes_hsok
ENSMOCG00000021026	Prdm12	89	80.059	ENSORLG00015003435	-	97	75.132	Oryzias_latipes_hsok
ENSMOCG00000021026	Prdm12	92	80.000	ENSOMEG00000004134	prdm12b	99	76.364	Oryzias_melastigma
ENSMOCG00000021026	Prdm12	93	77.072	ENSOMEG00000007762	-	99	75.936	Oryzias_melastigma
ENSMOCG00000021026	Prdm12	91	98.799	ENSOGAG00000007557	PRDM12	100	98.799	Otolemur_garnettii
ENSMOCG00000021026	Prdm12	78	97.213	ENSPPAG00000031506	-	97	97.213	Pan_paniscus
ENSMOCG00000021026	Prdm12	93	90.058	ENSPPRG00000023024	PRDM12	88	89.275	Panthera_pardus
ENSMOCG00000021026	Prdm12	93	97.953	ENSPTRG00000043324	-	98	94.413	Pan_troglodytes
ENSMOCG00000021026	Prdm12	93	97.953	ENSPTRG00000021475	PRDM12	98	94.413	Pan_troglodytes
ENSMOCG00000021026	Prdm12	93	98.246	ENSPANG00000025967	PRDM12	98	95.763	Papio_anubis
ENSMOCG00000021026	Prdm12	93	78.632	ENSPKIG00000004305	PRDM12	99	78.632	Paramormyrops_kingsleyae
ENSMOCG00000021026	Prdm12	91	85.345	ENSPKIG00000007228	prdm12b	99	82.162	Paramormyrops_kingsleyae
ENSMOCG00000021026	Prdm12	93	92.962	ENSPSIG00000006739	PRDM12	99	91.168	Pelodiscus_sinensis
ENSMOCG00000021026	Prdm12	90	83.728	ENSPMGG00000008867	prdm12b	100	78.495	Periophthalmus_magnuspinnatus
ENSMOCG00000021026	Prdm12	90	80.952	ENSPMGG00000002356	-	88	81.250	Periophthalmus_magnuspinnatus
ENSMOCG00000021026	Prdm12	91	99.699	ENSPEMG00000009969	Prdm12	98	93.872	Peromyscus_maniculatus_bairdii
ENSMOCG00000021026	Prdm12	93	95.015	ENSPCIG00000024119	PRDM12	98	93.948	Phascolarctos_cinereus
ENSMOCG00000021026	Prdm12	92	81.429	ENSPFOG00000019841	prdm12b	100	78.320	Poecilia_formosa
ENSMOCG00000021026	Prdm12	90	83.333	ENSPLAG00000016626	prdm12b	98	77.957	Poecilia_latipinna
ENSMOCG00000021026	Prdm12	88	82.371	ENSPMEG00000016698	prdm12b	95	79.202	Poecilia_mexicana
ENSMOCG00000021026	Prdm12	90	76.401	ENSPREG00000003211	-	95	75.072	Poecilia_reticulata
ENSMOCG00000021026	Prdm12	90	83.186	ENSPREG00000015073	prdm12b	99	77.454	Poecilia_reticulata
ENSMOCG00000021026	Prdm12	93	97.076	ENSPPYG00000019694	PRDM12	99	95.389	Pongo_abelii
ENSMOCG00000021026	Prdm12	93	98.827	ENSPCOG00000022255	PRDM12	98	95.531	Propithecus_coquereli
ENSMOCG00000021026	Prdm12	93	98.538	ENSPVAG00000001511	PRDM12	99	94.737	Pteropus_vampyrus
ENSMOCG00000021026	Prdm12	93	79.437	ENSPNYG00000009607	prdm12b	100	77.128	Pundamilia_nyererei
ENSMOCG00000021026	Prdm12	89	82.164	ENSPNYG00000013589	-	86	82.164	Pundamilia_nyererei
ENSMOCG00000021026	Prdm12	89	81.212	ENSPNAG00000013396	PRDM12	99	74.932	Pygocentrus_nattereri
ENSMOCG00000021026	Prdm12	90	89.222	ENSPNAG00000024532	prdm12b	97	85.319	Pygocentrus_nattereri
ENSMOCG00000021026	Prdm12	93	99.415	ENSRNOG00000009218	Prdm12	98	96.348	Rattus_norvegicus
ENSMOCG00000021026	Prdm12	87	98.107	ENSRBIG00000042712	PRDM12	99	89.751	Rhinopithecus_bieti
ENSMOCG00000021026	Prdm12	88	98.131	ENSRROG00000043554	PRDM12	100	98.131	Rhinopithecus_roxellana
ENSMOCG00000021026	Prdm12	93	94.737	ENSSHAG00000015972	PRDM12	98	93.678	Sarcophilus_harrisii
ENSMOCG00000021026	Prdm12	90	80.342	ENSSMAG00000003754	prdm12b	95	77.628	Scophthalmus_maximus
ENSMOCG00000021026	Prdm12	93	81.395	ENSSDUG00000019071	-	95	82.647	Seriola_dumerili
ENSMOCG00000021026	Prdm12	93	78.947	ENSSDUG00000023498	prdm12b	95	78.904	Seriola_dumerili
ENSMOCG00000021026	Prdm12	93	79.609	ENSSLDG00000009557	prdm12b	95	79.834	Seriola_lalandi_dorsalis
ENSMOCG00000021026	Prdm12	89	84.356	ENSSLDG00000013562	-	98	81.143	Seriola_lalandi_dorsalis
ENSMOCG00000021026	Prdm12	93	92.669	ENSSPUG00000013424	PRDM12	99	90.883	Sphenodon_punctatus
ENSMOCG00000021026	Prdm12	89	82.164	ENSSPAG00000018824	prdm12b	99	76.393	Stegastes_partitus
ENSMOCG00000021026	Prdm12	89	72.271	ENSSPAG00000022420	-	96	70.278	Stegastes_partitus
ENSMOCG00000021026	Prdm12	93	98.830	ENSSSCG00000005703	PRDM12	99	95.265	Sus_scrofa
ENSMOCG00000021026	Prdm12	89	81.325	ENSTRUG00000013239	-	93	81.627	Takifugu_rubripes
ENSMOCG00000021026	Prdm12	90	83.136	ENSTRUG00000018659	prdm12b	96	80.618	Takifugu_rubripes
ENSMOCG00000021026	Prdm12	92	77.841	ENSTNIG00000005859	-	99	77.841	Tetraodon_nigroviridis
ENSMOCG00000021026	Prdm12	90	83.776	ENSTNIG00000009020	prdm12b	96	80.952	Tetraodon_nigroviridis
ENSMOCG00000021026	Prdm12	93	97.953	ENSUAMG00000009653	PRDM12	95	97.953	Ursus_americanus
ENSMOCG00000021026	Prdm12	91	98.795	ENSVVUG00000027662	PRDM12	79	98.795	Vulpes_vulpes
ENSMOCG00000021026	Prdm12	90	83.333	ENSXCOG00000002836	prdm12b	100	76.944	Xiphophorus_couchianus
ENSMOCG00000021026	Prdm12	90	80.588	ENSXMAG00000028012	-	88	80.588	Xiphophorus_maculatus
ENSMOCG00000021026	Prdm12	90	82.840	ENSXMAG00000005537	prdm12b	100	76.533	Xiphophorus_maculatus