EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000021170 (Gene tree)
Gene ID: 101990056
Gene Symbol: Rbm47
Alias: 9530077J19Rik
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Minus strand
Length: 60098 bases
Position: chrLG1:22840323-22900420
Accession: 101990056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000024903	RRM_1	PF00076.22	2.7e-37	1	3
ENSMOCP00000024903	RRM_1	PF00076.22	2.7e-37	2	3
ENSMOCP00000024903	RRM_1	PF00076.22	2.7e-37	3	3
ENSMOCP00000024901	RRM_1	PF00076.22	4.4e-37	1	3
ENSMOCP00000024901	RRM_1	PF00076.22	4.4e-37	2	3
ENSMOCP00000024901	RRM_1	PF00076.22	4.4e-37	3	3
ENSMOCP00000024896	RRM_1	PF00076.22	1.8e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000028768	-	1569	-	ENSMOCP00000024903	522 (aa)	-	UPI00038BC054
ENSMOCT00000028761	-	2114	-	ENSMOCP00000024896	158 (aa)	-	-
ENSMOCT00000028766	-	1955	XM_005359278	ENSMOCP00000024901	591 (aa)	XP_005359335	UPI00038C171D

Gene Model

Click here to download ENSMOCG00000021170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000021170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000021170	Rbm47	84	78.030	ENSMOCG00000001188	Rbm46	64	74.333
ENSMOCG00000021170	Rbm47	89	67.376	ENSMOCG00000021536	A1cf	76	56.485
ENSMOCG00000021170	Rbm47	81	51.562	ENSMOCG00000018076	Dnd1	66	39.316
ENSMOCG00000021170	Rbm47	88	57.042	ENSMOCG00000003370	Syncrip	73	57.692
ENSMOCG00000021170	Rbm47	88	59.155	ENSMOCG00000013434	Hnrnpr	71	45.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000021170	Rbm47	100	95.570	ENSG00000163694	RBM47	100	95.853	Homo_sapiens
ENSMOCG00000021170	Rbm47	100	82.540	ENSAPOG00000011062	rbm47	100	81.746	Acanthochromis_polyacanthus
ENSMOCG00000021170	Rbm47	100	93.671	ENSAMEG00000009672	RBM47	100	93.950	Ailuropoda_melanoleuca
ENSMOCG00000021170	Rbm47	100	83.333	ENSACIG00000011531	rbm47	100	82.275	Amphilophus_citrinellus
ENSMOCG00000021170	Rbm47	100	82.540	ENSAOCG00000022245	rbm47	100	81.746	Amphiprion_ocellaris
ENSMOCG00000021170	Rbm47	100	82.540	ENSAPEG00000018304	rbm47	100	81.746	Amphiprion_percula
ENSMOCG00000021170	Rbm47	100	82.051	ENSATEG00000018400	rbm47	100	81.026	Anabas_testudineus
ENSMOCG00000021170	Rbm47	100	87.975	ENSAPLG00000013974	RBM47	100	86.678	Anas_platyrhynchos
ENSMOCG00000021170	Rbm47	100	85.000	ENSACAG00000011833	RBM47	100	84.500	Anolis_carolinensis
ENSMOCG00000021170	Rbm47	100	96.203	ENSANAG00000029440	RBM47	100	93.950	Aotus_nancymaae
ENSMOCG00000021170	Rbm47	100	81.959	ENSACLG00000016902	rbm47	100	80.928	Astatotilapia_calliptera
ENSMOCG00000021170	Rbm47	100	80.155	ENSAMXG00000021794	rbm47	100	79.897	Astyanax_mexicanus
ENSMOCG00000021170	Rbm47	100	96.835	ENSBTAG00000002356	RBM47	100	94.444	Bos_taurus
ENSMOCG00000021170	Rbm47	100	94.937	ENSCJAG00000019385	RBM47	100	93.960	Callithrix_jacchus
ENSMOCG00000021170	Rbm47	96	92.644	ENSCAFG00000015898	RBM47	100	91.261	Canis_familiaris
ENSMOCG00000021170	Rbm47	86	94.853	ENSCAFG00020010558	RBM47	94	92.857	Canis_lupus_dingo
ENSMOCG00000021170	Rbm47	100	96.203	ENSCHIG00000026214	RBM47	100	94.276	Capra_hircus
ENSMOCG00000021170	Rbm47	90	82.114	ENSTSYG00000033612	RBM47	93	87.168	Carlito_syrichta
ENSMOCG00000021170	Rbm47	100	85.882	ENSCAPG00000008426	RBM47	100	86.218	Cavia_aperea
ENSMOCG00000021170	Rbm47	100	95.570	ENSCPOG00000014100	RBM47	100	92.605	Cavia_porcellus
ENSMOCG00000021170	Rbm47	100	95.570	ENSCCAG00000030129	-	100	93.792	Cebus_capucinus
ENSMOCG00000021170	Rbm47	99	65.705	ENSCCAG00000024397	-	99	65.025	Cebus_capucinus
ENSMOCG00000021170	Rbm47	100	95.570	ENSCATG00000042064	RBM47	100	93.782	Cercocebus_atys
ENSMOCG00000021170	Rbm47	100	93.883	ENSCLAG00000001684	RBM47	100	93.038	Chinchilla_lanigera
ENSMOCG00000021170	Rbm47	100	95.570	ENSCSAG00000017060	RBM47	100	93.782	Chlorocebus_sabaeus
ENSMOCG00000021170	Rbm47	100	93.082	ENSCHOG00000011731	RBM47	88	88.117	Choloepus_hoffmanni
ENSMOCG00000021170	Rbm47	100	88.608	ENSCPBG00000013831	RBM47	100	88.314	Chrysemys_picta_bellii
ENSMOCG00000021170	Rbm47	100	95.570	ENSCANG00000019997	RBM47	100	93.950	Colobus_angolensis_palliatus
ENSMOCG00000021170	Rbm47	100	92.557	ENSCGRG00001020102	-	100	92.557	Cricetulus_griseus_chok1gshd
ENSMOCG00000021170	Rbm47	100	98.670	ENSCGRG00001000623	-	100	97.639	Cricetulus_griseus_chok1gshd
ENSMOCG00000021170	Rbm47	100	91.985	ENSCGRG00000014760	-	100	91.985	Cricetulus_griseus_crigri
ENSMOCG00000021170	Rbm47	100	98.138	ENSCGRG00000007762	-	100	98.101	Cricetulus_griseus_crigri
ENSMOCG00000021170	Rbm47	100	79.114	ENSCSEG00000004545	rbm47	100	80.371	Cynoglossus_semilaevis
ENSMOCG00000021170	Rbm47	100	81.646	ENSCVAG00000020144	rbm47	100	81.915	Cyprinodon_variegatus
ENSMOCG00000021170	Rbm47	100	75.882	ENSDARG00000061985	rbm47	100	79.241	Danio_rerio
ENSMOCG00000021170	Rbm47	100	93.883	ENSDNOG00000046854	RBM47	100	92.243	Dasypus_novemcinctus
ENSMOCG00000021170	Rbm47	100	93.132	ENSDORG00000010144	Rbm47	100	92.965	Dipodomys_ordii
ENSMOCG00000021170	Rbm47	100	92.797	ENSETEG00000009194	RBM47	100	92.630	Echinops_telfairi
ENSMOCG00000021170	Rbm47	82	77.519	ENSEBUG00000011912	rbm47	95	75.287	Eptatretus_burgeri
ENSMOCG00000021170	Rbm47	100	94.937	ENSEASG00005008443	RBM47	100	93.771	Equus_asinus_asinus
ENSMOCG00000021170	Rbm47	100	94.937	ENSECAG00000004400	RBM47	100	93.771	Equus_caballus
ENSMOCG00000021170	Rbm47	100	91.195	ENSEEUG00000001194	RBM47	75	93.506	Erinaceus_europaeus
ENSMOCG00000021170	Rbm47	100	80.808	ENSELUG00000006148	rbm47	100	79.899	Esox_lucius
ENSMOCG00000021170	Rbm47	100	95.570	ENSFCAG00000012399	RBM47	100	93.939	Felis_catus
ENSMOCG00000021170	Rbm47	100	88.758	ENSFALG00000002861	RBM47	100	88.255	Ficedula_albicollis
ENSMOCG00000021170	Rbm47	100	91.755	ENSFDAG00000016326	RBM47	100	90.252	Fukomys_damarensis
ENSMOCG00000021170	Rbm47	96	85.634	ENSFHEG00000007938	rbm47	100	73.623	Fundulus_heteroclitus
ENSMOCG00000021170	Rbm47	100	79.494	ENSGMOG00000014802	rbm47	100	78.481	Gadus_morhua
ENSMOCG00000021170	Rbm47	100	87.975	ENSGALG00000014267	RBM47	99	90.160	Gallus_gallus
ENSMOCG00000021170	Rbm47	100	81.646	ENSGAFG00000020571	rbm47	98	81.117	Gambusia_affinis
ENSMOCG00000021170	Rbm47	100	79.082	ENSGACG00000016223	rbm47	100	78.316	Gasterosteus_aculeatus
ENSMOCG00000021170	Rbm47	100	88.648	ENSGAGG00000020051	RBM47	100	88.481	Gopherus_agassizii
ENSMOCG00000021170	Rbm47	100	95.570	ENSGGOG00000001367	RBM47	100	93.782	Gorilla_gorilla
ENSMOCG00000021170	Rbm47	100	81.959	ENSHBUG00000003520	rbm47	100	80.928	Haplochromis_burtoni
ENSMOCG00000021170	Rbm47	100	93.671	ENSHGLG00000016914	RBM47	100	93.671	Heterocephalus_glaber_female
ENSMOCG00000021170	Rbm47	100	93.671	ENSHGLG00100014028	-	100	93.671	Heterocephalus_glaber_male
ENSMOCG00000021170	Rbm47	100	88.564	ENSHGLG00100003071	-	100	83.108	Heterocephalus_glaber_male
ENSMOCG00000021170	Rbm47	100	79.375	ENSHCOG00000002074	rbm47	99	81.746	Hippocampus_comes
ENSMOCG00000021170	Rbm47	100	79.897	ENSIPUG00000004743	rbm47	100	80.319	Ictalurus_punctatus
ENSMOCG00000021170	Rbm47	100	94.304	ENSSTOG00000004727	RBM47	100	94.304	Ictidomys_tridecemlineatus
ENSMOCG00000021170	Rbm47	100	94.595	ENSJJAG00000013823	Rbm47	100	93.613	Jaculus_jaculus
ENSMOCG00000021170	Rbm47	100	82.804	ENSKMAG00000000084	rbm47	100	81.481	Kryptolebias_marmoratus
ENSMOCG00000021170	Rbm47	100	81.579	ENSLBEG00000008436	rbm47	100	80.319	Labrus_bergylta
ENSMOCG00000021170	Rbm47	100	85.904	ENSLACG00000007196	RBM47	100	82.609	Latimeria_chalumnae
ENSMOCG00000021170	Rbm47	100	85.443	ENSLOCG00000012966	rbm47	95	79.264	Lepisosteus_oculatus
ENSMOCG00000021170	Rbm47	100	94.937	ENSLAFG00000011998	RBM47	100	93.277	Loxodonta_africana
ENSMOCG00000021170	Rbm47	100	95.570	ENSMFAG00000037967	RBM47	100	93.782	Macaca_fascicularis
ENSMOCG00000021170	Rbm47	100	95.570	ENSMMUG00000012036	RBM47	100	95.337	Macaca_mulatta
ENSMOCG00000021170	Rbm47	100	95.570	ENSMNEG00000040774	RBM47	100	93.950	Macaca_nemestrina
ENSMOCG00000021170	Rbm47	100	96.190	ENSMLEG00000041432	RBM47	100	96.190	Mandrillus_leucophaeus
ENSMOCG00000021170	Rbm47	100	82.262	ENSMAMG00000019143	rbm47	100	80.977	Mastacembelus_armatus
ENSMOCG00000021170	Rbm47	100	81.959	ENSMZEG00005023659	rbm47	100	80.928	Maylandia_zebra
ENSMOCG00000021170	Rbm47	100	88.481	ENSMGAG00000012226	RBM47	100	87.646	Meleagris_gallopavo
ENSMOCG00000021170	Rbm47	100	99.044	ENSMAUG00000006493	Rbm47	100	99.044	Mesocricetus_auratus
ENSMOCG00000021170	Rbm47	100	86.700	ENSMICG00000026417	RBM47	100	87.374	Microcebus_murinus
ENSMOCG00000021170	Rbm47	100	80.720	ENSMMOG00000007260	rbm47	100	79.692	Mola_mola
ENSMOCG00000021170	Rbm47	100	86.076	ENSMODG00000020561	-	100	80.471	Monodelphis_domestica
ENSMOCG00000021170	Rbm47	87	82.517	ENSMODG00000015426	-	99	77.918	Monodelphis_domestica
ENSMOCG00000021170	Rbm47	100	92.287	ENSMODG00000007003	RBM47	100	90.067	Monodelphis_domestica
ENSMOCG00000021170	Rbm47	100	80.380	ENSMALG00000005167	rbm47	100	82.447	Monopterus_albus
ENSMOCG00000021170	Rbm47	100	98.276	MGP_CAROLIEiJ_G0027258	Rbm47	100	98.276	Mus_caroli
ENSMOCG00000021170	Rbm47	100	98.276	ENSMUSG00000070780	Rbm47	100	98.276	Mus_musculus
ENSMOCG00000021170	Rbm47	100	98.659	MGP_PahariEiJ_G0017040	Rbm47	100	98.659	Mus_pahari
ENSMOCG00000021170	Rbm47	100	97.701	MGP_SPRETEiJ_G0028253	Rbm47	100	97.701	Mus_spretus
ENSMOCG00000021170	Rbm47	100	95.101	ENSMPUG00000006177	RBM47	94	95.101	Mustela_putorius_furo
ENSMOCG00000021170	Rbm47	100	93.038	ENSMLUG00000000889	RBM47	100	91.582	Myotis_lucifugus
ENSMOCG00000021170	Rbm47	100	96.203	ENSNGAG00000003325	Rbm47	100	93.592	Nannospalax_galili
ENSMOCG00000021170	Rbm47	100	82.216	ENSNBRG00000015092	rbm47	100	81.443	Neolamprologus_brichardi
ENSMOCG00000021170	Rbm47	100	95.570	ENSNLEG00000017151	RBM47	100	93.445	Nomascus_leucogenys
ENSMOCG00000021170	Rbm47	89	93.617	ENSMEUG00000009516	-	99	86.682	Notamacropus_eugenii
ENSMOCG00000021170	Rbm47	85	93.802	ENSOPRG00000016507	-	75	93.802	Ochotona_princeps
ENSMOCG00000021170	Rbm47	100	94.415	ENSODEG00000004873	RBM47	100	92.605	Octodon_degus
ENSMOCG00000021170	Rbm47	100	81.074	ENSONIG00000009061	rbm47	100	80.051	Oreochromis_niloticus
ENSMOCG00000021170	Rbm47	100	86.333	ENSOANG00000008978	RBM47	100	86.667	Ornithorhynchus_anatinus
ENSMOCG00000021170	Rbm47	100	93.109	ENSOCUG00000012034	RBM47	100	92.437	Oryctolagus_cuniculus
ENSMOCG00000021170	Rbm47	100	82.447	ENSORLG00000005847	rbm47	100	81.117	Oryzias_latipes
ENSMOCG00000021170	Rbm47	100	82.447	ENSORLG00020005154	rbm47	100	81.117	Oryzias_latipes_hni
ENSMOCG00000021170	Rbm47	100	82.713	ENSORLG00015000066	rbm47	100	81.383	Oryzias_latipes_hsok
ENSMOCG00000021170	Rbm47	100	82.713	ENSOMEG00000010730	rbm47	100	81.649	Oryzias_melastigma
ENSMOCG00000021170	Rbm47	100	95.101	ENSOGAG00000029367	-	100	95.101	Otolemur_garnettii
ENSMOCG00000021170	Rbm47	100	88.608	ENSOGAG00000025193	-	100	86.318	Otolemur_garnettii
ENSMOCG00000021170	Rbm47	100	87.333	ENSOARG00000012711	RBM47	100	86.387	Ovis_aries
ENSMOCG00000021170	Rbm47	100	95.570	ENSPPAG00000029763	RBM47	100	93.613	Pan_paniscus
ENSMOCG00000021170	Rbm47	100	95.570	ENSPPRG00000012873	RBM47	100	94.947	Panthera_pardus
ENSMOCG00000021170	Rbm47	85	91.252	ENSPTIG00000017046	RBM47	100	91.252	Panthera_tigris_altaica
ENSMOCG00000021170	Rbm47	100	95.570	ENSPTRG00000016006	RBM47	100	93.782	Pan_troglodytes
ENSMOCG00000021170	Rbm47	100	95.570	ENSPANG00000005980	RBM47	100	93.782	Papio_anubis
ENSMOCG00000021170	Rbm47	87	89.051	ENSPKIG00000013431	RBM47	98	79.949	Paramormyrops_kingsleyae
ENSMOCG00000021170	Rbm47	87	88.321	ENSPKIG00000005037	rbm47	100	79.793	Paramormyrops_kingsleyae
ENSMOCG00000021170	Rbm47	100	88.608	ENSPSIG00000017516	RBM47	97	89.454	Pelodiscus_sinensis
ENSMOCG00000021170	Rbm47	100	80.380	ENSPMGG00000018540	rbm47	100	81.915	Periophthalmus_magnuspinnatus
ENSMOCG00000021170	Rbm47	100	100.000	ENSPEMG00000011088	Rbm47	100	99.235	Peromyscus_maniculatus_bairdii
ENSMOCG00000021170	Rbm47	96	84.916	ENSPFOG00000007997	rbm47	100	78.228	Poecilia_formosa
ENSMOCG00000021170	Rbm47	100	81.013	ENSPLAG00000002072	rbm47	100	80.423	Poecilia_latipinna
ENSMOCG00000021170	Rbm47	100	82.447	ENSPMEG00000017492	rbm47	100	81.117	Poecilia_mexicana
ENSMOCG00000021170	Rbm47	100	81.646	ENSPREG00000008456	rbm47	100	80.688	Poecilia_reticulata
ENSMOCG00000021170	Rbm47	98	82.656	ENSPPYG00000014688	RBM47	100	80.405	Pongo_abelii
ENSMOCG00000021170	Rbm47	100	95.570	ENSPCAG00000011879	RBM47	81	95.262	Procavia_capensis
ENSMOCG00000021170	Rbm47	100	90.878	ENSPCOG00000023451	RBM47	100	90.878	Propithecus_coquereli
ENSMOCG00000021170	Rbm47	100	94.937	ENSPVAG00000003812	RBM47	100	93.277	Pteropus_vampyrus
ENSMOCG00000021170	Rbm47	100	81.959	ENSPNYG00000022868	rbm47	100	80.928	Pundamilia_nyererei
ENSMOCG00000021170	Rbm47	100	76.471	ENSPNAG00000007940	rbm47	100	80.670	Pygocentrus_nattereri
ENSMOCG00000021170	Rbm47	100	98.308	ENSRNOG00000002408	Rbm47	100	98.308	Rattus_norvegicus
ENSMOCG00000021170	Rbm47	100	95.570	ENSRBIG00000039601	RBM47	100	93.950	Rhinopithecus_bieti
ENSMOCG00000021170	Rbm47	100	95.570	ENSRROG00000044696	RBM47	100	93.950	Rhinopithecus_roxellana
ENSMOCG00000021170	Rbm47	100	95.570	ENSSBOG00000028475	RBM47	100	95.258	Saimiri_boliviensis_boliviensis
ENSMOCG00000021170	Rbm47	100	92.021	ENSSHAG00000017576	RBM47	100	90.236	Sarcophilus_harrisii
ENSMOCG00000021170	Rbm47	100	74.556	ENSSFOG00015012445	rbm47	100	76.904	Scleropages_formosus
ENSMOCG00000021170	Rbm47	100	79.747	ENSSFOG00015024101	RBM47	100	72.333	Scleropages_formosus
ENSMOCG00000021170	Rbm47	100	80.000	ENSSMAG00000009744	rbm47	100	78.462	Scophthalmus_maximus
ENSMOCG00000021170	Rbm47	100	81.646	ENSSDUG00000022684	rbm47	100	81.915	Seriola_dumerili
ENSMOCG00000021170	Rbm47	100	82.278	ENSSLDG00000003109	rbm47	100	82.181	Seriola_lalandi_dorsalis
ENSMOCG00000021170	Rbm47	100	94.304	ENSSARG00000001735	RBM47	75	93.512	Sorex_araneus
ENSMOCG00000021170	Rbm47	100	85.452	ENSSPUG00000007515	RBM47	100	87.831	Sphenodon_punctatus
ENSMOCG00000021170	Rbm47	100	81.888	ENSSPAG00000001257	rbm47	100	82.540	Stegastes_partitus
ENSMOCG00000021170	Rbm47	100	96.203	ENSSSCG00000008796	RBM47	100	93.939	Sus_scrofa
ENSMOCG00000021170	Rbm47	100	88.591	ENSTGUG00000008705	RBM47	100	88.255	Taeniopygia_guttata
ENSMOCG00000021170	Rbm47	100	81.646	ENSTRUG00000014050	rbm47	100	81.383	Takifugu_rubripes
ENSMOCG00000021170	Rbm47	100	80.977	ENSTNIG00000006127	rbm47	100	73.366	Tetraodon_nigroviridis
ENSMOCG00000021170	Rbm47	100	93.671	ENSTBEG00000001607	RBM47	76	94.737	Tupaia_belangeri
ENSMOCG00000021170	Rbm47	100	94.937	ENSTTRG00000002839	RBM47	100	93.919	Tursiops_truncatus
ENSMOCG00000021170	Rbm47	100	94.595	ENSUAMG00000021346	RBM47	100	94.764	Ursus_americanus
ENSMOCG00000021170	Rbm47	92	95.205	ENSVPAG00000000641	-	57	95.205	Vicugna_pacos
ENSMOCG00000021170	Rbm47	96	93.695	ENSVVUG00000014774	RBM47	100	91.429	Vulpes_vulpes
ENSMOCG00000021170	Rbm47	100	84.921	ENSXETG00000012802	rbm47	100	83.670	Xenopus_tropicalis
ENSMOCG00000021170	Rbm47	100	81.646	ENSXCOG00000000780	rbm47	100	80.688	Xiphophorus_couchianus
ENSMOCG00000021170	Rbm47	100	82.447	ENSXMAG00000009874	rbm47	100	81.117	Xiphophorus_maculatus