EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000021279 (Gene tree)
Gene ID: 101992649
Gene Symbol: Lrrc47
Alias: 2900010D03Rik
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 11282 bases
Position: chrJH996468.1:1412661-1423942
Accession: 101992649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000025037	B3_4	PF03483.17	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000028903	-	2893	XM_005368633	ENSMOCP00000025037	572 (aa)	XP_005368690	UPI00038BFE2E

Gene Model

Click here to download ENSMOCG00000021279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000021279's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000021279	Lrrc47	100	86.449	ENSG00000130764	LRRC47	100	84.734	Homo_sapiens
ENSMOCG00000021279	Lrrc47	99	53.779	ENSAPOG00000019553	lrrc47	99	53.954	Acanthochromis_polyacanthus
ENSMOCG00000021279	Lrrc47	79	76.087	ENSAMEG00000009152	LRRC47	100	76.087	Ailuropoda_melanoleuca
ENSMOCG00000021279	Lrrc47	66	68.325	ENSAPLG00000003167	LRRC47	100	66.230	Anas_platyrhynchos
ENSMOCG00000021279	Lrrc47	65	66.755	ENSACAG00000008267	LRRC47	99	67.200	Anolis_carolinensis
ENSMOCG00000021279	Lrrc47	100	85.763	ENSANAG00000025576	LRRC47	100	84.048	Aotus_nancymaae
ENSMOCG00000021279	Lrrc47	99	81.424	ENSBTAG00000004738	LRRC47	99	81.002	Bos_taurus
ENSMOCG00000021279	Lrrc47	99	81.043	ENSCAFG00000019492	LRRC47	99	80.034	Canis_familiaris
ENSMOCG00000021279	Lrrc47	100	80.928	ENSCAFG00020009667	LRRC47	100	80.241	Canis_lupus_dingo
ENSMOCG00000021279	Lrrc47	99	81.771	ENSCHIG00000022607	LRRC47	99	80.484	Capra_hircus
ENSMOCG00000021279	Lrrc47	95	84.381	ENSTSYG00000009326	LRRC47	96	82.944	Carlito_syrichta
ENSMOCG00000021279	Lrrc47	64	82.181	ENSCAPG00000016517	LRRC47	100	81.117	Cavia_aperea
ENSMOCG00000021279	Lrrc47	100	86.231	ENSCPOG00000014931	LRRC47	96	85.542	Cavia_porcellus
ENSMOCG00000021279	Lrrc47	100	85.592	ENSCCAG00000024895	LRRC47	100	83.705	Cebus_capucinus
ENSMOCG00000021279	Lrrc47	100	87.136	ENSCATG00000029337	LRRC47	100	85.249	Cercocebus_atys
ENSMOCG00000021279	Lrrc47	100	87.370	ENSCLAG00000006093	LRRC47	100	85.467	Chinchilla_lanigera
ENSMOCG00000021279	Lrrc47	100	87.307	ENSCSAG00000000727	LRRC47	100	85.420	Chlorocebus_sabaeus
ENSMOCG00000021279	Lrrc47	99	60.678	ENSCPBG00000019404	LRRC47	98	60.000	Chrysemys_picta_bellii
ENSMOCG00000021279	Lrrc47	78	81.996	ENSCANG00000030701	LRRC47	96	81.345	Colobus_angolensis_palliatus
ENSMOCG00000021279	Lrrc47	99	92.483	ENSCGRG00001015159	Lrrc47	90	92.201	Cricetulus_griseus_chok1gshd
ENSMOCG00000021279	Lrrc47	65	89.920	ENSCGRG00000017336	Lrrc47	100	90.107	Cricetulus_griseus_crigri
ENSMOCG00000021279	Lrrc47	99	53.697	ENSCSEG00000006217	lrrc47	95	54.049	Cynoglossus_semilaevis
ENSMOCG00000021279	Lrrc47	64	78.191	ENSDORG00000016594	Lrrc47	99	77.128	Dipodomys_ordii
ENSMOCG00000021279	Lrrc47	100	82.847	ENSEASG00005021788	LRRC47	100	82.847	Equus_asinus_asinus
ENSMOCG00000021279	Lrrc47	99	82.180	ENSECAG00000022472	LRRC47	91	82.333	Equus_caballus
ENSMOCG00000021279	Lrrc47	99	52.479	ENSELUG00000017544	lrrc47	98	52.055	Esox_lucius
ENSMOCG00000021279	Lrrc47	94	81.353	ENSFCAG00000011632	LRRC47	97	81.307	Felis_catus
ENSMOCG00000021279	Lrrc47	73	64.941	ENSFALG00000009631	LRRC47	99	63.170	Ficedula_albicollis
ENSMOCG00000021279	Lrrc47	97	53.476	ENSGMOG00000015674	lrrc47	97	51.773	Gadus_morhua
ENSMOCG00000021279	Lrrc47	99	61.632	ENSGALG00000050995	LRRC47	100	62.674	Gallus_gallus
ENSMOCG00000021279	Lrrc47	99	54.240	ENSGACG00000005550	lrrc47	99	54.417	Gasterosteus_aculeatus
ENSMOCG00000021279	Lrrc47	100	63.043	ENSGAGG00000022584	LRRC47	99	62.040	Gopherus_agassizii
ENSMOCG00000021279	Lrrc47	100	86.449	ENSGGOG00000015571	LRRC47	100	84.734	Gorilla_gorilla
ENSMOCG00000021279	Lrrc47	100	85.542	ENSHGLG00000018278	LRRC47	96	84.854	Heterocephalus_glaber_female
ENSMOCG00000021279	Lrrc47	69	81.638	ENSHGLG00100008507	LRRC47	100	80.645	Heterocephalus_glaber_male
ENSMOCG00000021279	Lrrc47	99	55.221	ENSHCOG00000006348	lrrc47	97	55.221	Hippocampus_comes
ENSMOCG00000021279	Lrrc47	100	85.714	ENSSTOG00000027559	LRRC47	100	86.897	Ictidomys_tridecemlineatus
ENSMOCG00000021279	Lrrc47	99	88.696	ENSJJAG00000017474	Lrrc47	97	87.091	Jaculus_jaculus
ENSMOCG00000021279	Lrrc47	99	54.482	ENSKMAG00000003414	lrrc47	99	54.482	Kryptolebias_marmoratus
ENSMOCG00000021279	Lrrc47	100	80.961	ENSLAFG00000011657	LRRC47	99	80.961	Loxodonta_africana
ENSMOCG00000021279	Lrrc47	74	95.631	ENSMFAG00000045730	LRRC47	90	95.631	Macaca_fascicularis
ENSMOCG00000021279	Lrrc47	99	87.370	ENSMNEG00000042488	LRRC47	99	85.395	Macaca_nemestrina
ENSMOCG00000021279	Lrrc47	76	80.488	ENSMLEG00000043735	LRRC47	91	79.823	Mandrillus_leucophaeus
ENSMOCG00000021279	Lrrc47	99	93.739	ENSMAUG00000021337	Lrrc47	98	93.739	Mesocricetus_auratus
ENSMOCG00000021279	Lrrc47	100	85.567	ENSMICG00000026816	LRRC47	100	83.849	Microcebus_murinus
ENSMOCG00000021279	Lrrc47	99	53.521	ENSMMOG00000017007	lrrc47	99	53.169	Mola_mola
ENSMOCG00000021279	Lrrc47	99	94.425	MGP_CAROLIEiJ_G0026864	Lrrc47	99	94.291	Mus_caroli
ENSMOCG00000021279	Lrrc47	99	94.251	ENSMUSG00000029028	Lrrc47	99	94.118	Mus_musculus
ENSMOCG00000021279	Lrrc47	99	94.241	MGP_PahariEiJ_G0029212	Lrrc47	99	93.945	Mus_pahari
ENSMOCG00000021279	Lrrc47	99	94.599	MGP_SPRETEiJ_G0027857	Lrrc47	99	94.464	Mus_spretus
ENSMOCG00000021279	Lrrc47	64	74.603	ENSMPUG00000007321	LRRC47	75	74.603	Mustela_putorius_furo
ENSMOCG00000021279	Lrrc47	98	90.158	ENSNGAG00000022153	Lrrc47	99	90.484	Nannospalax_galili
ENSMOCG00000021279	Lrrc47	100	81.475	ENSNLEG00000008131	LRRC47	100	80.961	Nomascus_leucogenys
ENSMOCG00000021279	Lrrc47	84	84.049	ENSODEG00000010882	LRRC47	93	81.391	Octodon_degus
ENSMOCG00000021279	Lrrc47	96	56.364	ENSORLG00000002532	lrrc47	99	56.364	Oryzias_latipes
ENSMOCG00000021279	Lrrc47	99	56.162	ENSORLG00020019601	lrrc47	99	56.162	Oryzias_latipes_hni
ENSMOCG00000021279	Lrrc47	99	55.634	ENSORLG00015014040	lrrc47	99	55.634	Oryzias_latipes_hsok
ENSMOCG00000021279	Lrrc47	99	55.634	ENSOMEG00000008989	lrrc47	99	55.282	Oryzias_melastigma
ENSMOCG00000021279	Lrrc47	100	84.563	ENSOGAG00000001553	LRRC47	100	82.504	Otolemur_garnettii
ENSMOCG00000021279	Lrrc47	99	78.125	ENSOARG00000015290	LRRC47	99	77.720	Ovis_aries
ENSMOCG00000021279	Lrrc47	98	80.796	ENSPPAG00000036370	-	100	80.094	Pan_paniscus
ENSMOCG00000021279	Lrrc47	99	80.589	ENSPPRG00000005261	LRRC47	99	80.207	Panthera_pardus
ENSMOCG00000021279	Lrrc47	100	86.449	ENSPTRG00000000068	LRRC47	100	84.734	Pan_troglodytes
ENSMOCG00000021279	Lrrc47	100	87.136	ENSPANG00000012437	LRRC47	100	85.249	Papio_anubis
ENSMOCG00000021279	Lrrc47	65	65.617	ENSPSIG00000004196	LRRC47	100	63.780	Pelodiscus_sinensis
ENSMOCG00000021279	Lrrc47	64	94.118	ENSPEMG00000021068	Lrrc47	100	94.118	Peromyscus_maniculatus_bairdii
ENSMOCG00000021279	Lrrc47	98	72.855	ENSPCIG00000003638	LRRC47	100	73.973	Phascolarctos_cinereus
ENSMOCG00000021279	Lrrc47	93	55.701	ENSPFOG00000000992	lrrc47	94	55.431	Poecilia_formosa
ENSMOCG00000021279	Lrrc47	99	55.752	ENSPLAG00000008077	lrrc47	99	55.496	Poecilia_latipinna
ENSMOCG00000021279	Lrrc47	99	55.319	ENSPMEG00000007367	lrrc47	99	55.319	Poecilia_mexicana
ENSMOCG00000021279	Lrrc47	100	86.278	ENSPPYG00000001960	LRRC47	100	84.563	Pongo_abelii
ENSMOCG00000021279	Lrrc47	99	85.615	ENSPCOG00000019161	LRRC47	99	83.993	Propithecus_coquereli
ENSMOCG00000021279	Lrrc47	100	80.484	ENSPVAG00000009839	LRRC47	100	80.829	Pteropus_vampyrus
ENSMOCG00000021279	Lrrc47	100	53.966	ENSPNAG00000017982	lrrc47	100	52.759	Pygocentrus_nattereri
ENSMOCG00000021279	Lrrc47	99	94.637	ENSRNOG00000024796	Lrrc47	99	94.637	Rattus_norvegicus
ENSMOCG00000021279	Lrrc47	100	87.136	ENSRBIG00000019437	LRRC47	100	85.249	Rhinopithecus_bieti
ENSMOCG00000021279	Lrrc47	100	87.136	ENSRROG00000043182	LRRC47	100	85.249	Rhinopithecus_roxellana
ENSMOCG00000021279	Lrrc47	80	78.361	ENSSBOG00000026334	LRRC47	97	77.895	Saimiri_boliviensis_boliviensis
ENSMOCG00000021279	Lrrc47	98	60.345	ENSSHAG00000007360	LRRC47	100	60.237	Sarcophilus_harrisii
ENSMOCG00000021279	Lrrc47	99	54.895	ENSSMAG00000009344	lrrc47	99	55.203	Scophthalmus_maximus
ENSMOCG00000021279	Lrrc47	97	54.643	ENSSDUG00000014618	lrrc47	99	55.026	Seriola_dumerili
ENSMOCG00000021279	Lrrc47	97	55.476	ENSSLDG00000018908	lrrc47	99	54.850	Seriola_lalandi_dorsalis
ENSMOCG00000021279	Lrrc47	99	61.775	ENSSPUG00000010277	LRRC47	99	61.149	Sphenodon_punctatus
ENSMOCG00000021279	Lrrc47	99	55.536	ENSSPAG00000005188	lrrc47	99	55.712	Stegastes_partitus
ENSMOCG00000021279	Lrrc47	99	80.723	ENSSSCG00000039516	LRRC47	99	81.067	Sus_scrofa
ENSMOCG00000021279	Lrrc47	70	66.000	ENSTGUG00000002737	LRRC47	99	64.662	Taeniopygia_guttata
ENSMOCG00000021279	Lrrc47	99	53.439	ENSTRUG00000017696	lrrc47	99	53.004	Takifugu_rubripes
ENSMOCG00000021279	Lrrc47	99	53.076	ENSTNIG00000010923	lrrc47	99	52.827	Tetraodon_nigroviridis
ENSMOCG00000021279	Lrrc47	100	80.446	ENSTTRG00000011751	LRRC47	100	80.446	Tursiops_truncatus
ENSMOCG00000021279	Lrrc47	88	78.363	ENSUAMG00000012080	LRRC47	97	79.727	Ursus_americanus
ENSMOCG00000021279	Lrrc47	65	72.441	ENSUMAG00000010781	LRRC47	81	74.278	Ursus_maritimus
ENSMOCG00000021279	Lrrc47	99	73.129	ENSVVUG00000027118	LRRC47	99	70.748	Vulpes_vulpes
ENSMOCG00000021279	Lrrc47	99	59.828	ENSXETG00000006029	lrrc47	99	59.483	Xenopus_tropicalis
ENSMOCG00000021279	Lrrc47	98	55.595	ENSXCOG00000002813	lrrc47	98	55.595	Xiphophorus_couchianus
ENSMOCG00000021279	Lrrc47	99	55.221	ENSXMAG00000019386	lrrc47	99	55.142	Xiphophorus_maculatus