EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000021288 (Gene tree)
Gene ID: 101989226
Gene Symbol: Polr1d
Alias: 1110003G10Rik|16kDa|Rpo1-3|mRPA16
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 38824 bases
Position: chr2:28402306-28441129
Accession: 101989226
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000025055	RNA_pol_L_2	PF13656.6	2.6e-28	1	1
ENSMOCP00000025055	RNA_pol_L	PF01193.24	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000028921	-	1019	XM_005344704	ENSMOCP00000025055	133 (aa)	XP_005344761	UPI00038C0F5E
ENSMOCT00000028922	-	102	-	ENSMOCP00000025056	33 (aa)	-	UPI00001A92E3

Gene Model

Click here to download ENSMOCG00000021288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000021288's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000021288	Polr1d	77	33.010	ENSMOCG00000001294	Polr2j	85	33.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000021288	Polr1d	99	96.212	ENSG00000186184	POLR1D	99	96.212	Homo_sapiens
ENSMOCG00000021288	Polr1d	83	66.667	ENSAPOG00000021882	polr1d	98	66.667	Acanthochromis_polyacanthus
ENSMOCG00000021288	Polr1d	93	94.355	ENSAMEG00000019095	POLR1D	99	94.355	Ailuropoda_melanoleuca
ENSMOCG00000021288	Polr1d	80	68.519	ENSACIG00000013328	polr1d	94	68.519	Amphilophus_citrinellus
ENSMOCG00000021288	Polr1d	84	66.964	ENSAOCG00000018500	polr1d	98	66.964	Amphiprion_ocellaris
ENSMOCG00000021288	Polr1d	84	66.071	ENSAPEG00000009489	polr1d	98	66.071	Amphiprion_percula
ENSMOCG00000021288	Polr1d	80	65.421	ENSATEG00000019322	polr1d	94	65.421	Anabas_testudineus
ENSMOCG00000021288	Polr1d	83	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSMOCG00000021288	Polr1d	99	94.697	ENSANAG00000024486	POLR1D	99	94.697	Aotus_nancymaae
ENSMOCG00000021288	Polr1d	77	72.549	ENSACLG00000023805	polr1d	94	69.159	Astatotilapia_calliptera
ENSMOCG00000021288	Polr1d	80	69.811	ENSAMXG00000036118	polr1d	92	69.811	Astyanax_mexicanus
ENSMOCG00000021288	Polr1d	99	91.667	ENSBTAG00000008642	POLR1D	99	91.667	Bos_taurus
ENSMOCG00000021288	Polr1d	99	91.667	ENSBTAG00000033252	-	99	91.667	Bos_taurus
ENSMOCG00000021288	Polr1d	62	39.024	WBGene00010230	rpac-19	57	39.024	Caenorhabditis_elegans
ENSMOCG00000021288	Polr1d	99	93.939	ENSCJAG00000044669	POLR1D	99	93.939	Callithrix_jacchus
ENSMOCG00000021288	Polr1d	99	94.697	ENSCAFG00000006755	POLR1D	99	94.697	Canis_familiaris
ENSMOCG00000021288	Polr1d	99	92.424	ENSCHIG00000021910	POLR1D	99	92.424	Capra_hircus
ENSMOCG00000021288	Polr1d	95	80.620	ENSTSYG00000034852	-	98	80.508	Carlito_syrichta
ENSMOCG00000021288	Polr1d	91	91.736	ENSTSYG00000026817	-	91	91.736	Carlito_syrichta
ENSMOCG00000021288	Polr1d	96	53.125	ENSCAPG00000006058	-	99	53.125	Cavia_aperea
ENSMOCG00000021288	Polr1d	96	53.906	ENSCPOG00000030450	-	99	53.906	Cavia_porcellus
ENSMOCG00000021288	Polr1d	99	77.273	ENSCCAG00000020191	-	99	77.273	Cebus_capucinus
ENSMOCG00000021288	Polr1d	99	93.182	ENSCCAG00000021349	-	99	93.182	Cebus_capucinus
ENSMOCG00000021288	Polr1d	99	94.697	ENSCATG00000030710	-	99	94.697	Cercocebus_atys
ENSMOCG00000021288	Polr1d	99	84.848	ENSCATG00000022900	-	99	84.848	Cercocebus_atys
ENSMOCG00000021288	Polr1d	92	92.683	ENSCLAG00000017623	POLR1D	99	92.683	Chinchilla_lanigera
ENSMOCG00000021288	Polr1d	73	76.289	ENSCPBG00000004719	POLR1D	96	76.289	Chrysemys_picta_bellii
ENSMOCG00000021288	Polr1d	99	94.697	ENSCANG00000028632	-	99	94.697	Colobus_angolensis_palliatus
ENSMOCG00000021288	Polr1d	99	91.667	ENSCANG00000037694	-	99	91.667	Colobus_angolensis_palliatus
ENSMOCG00000021288	Polr1d	99	97.727	ENSCGRG00001021251	Polr1d	99	97.727	Cricetulus_griseus_chok1gshd
ENSMOCG00000021288	Polr1d	99	97.727	ENSCGRG00000011639	Polr1d	99	97.727	Cricetulus_griseus_crigri
ENSMOCG00000021288	Polr1d	85	64.602	ENSCSEG00000018268	polr1d	97	64.602	Cynoglossus_semilaevis
ENSMOCG00000021288	Polr1d	79	71.429	ENSCVAG00000018527	polr1d	92	71.429	Cyprinodon_variegatus
ENSMOCG00000021288	Polr1d	83	66.364	ENSDARG00000037570	polr1d	98	66.364	Danio_rerio
ENSMOCG00000021288	Polr1d	99	90.977	ENSDNOG00000046247	-	99	90.977	Dasypus_novemcinctus
ENSMOCG00000021288	Polr1d	99	93.182	ENSDNOG00000043676	-	99	93.182	Dasypus_novemcinctus
ENSMOCG00000021288	Polr1d	99	93.182	ENSDORG00000029155	Polr1d	99	93.182	Dipodomys_ordii
ENSMOCG00000021288	Polr1d	65	41.860	FBgn0086447	l(2)37Cg	81	41.860	Drosophila_melanogaster
ENSMOCG00000021288	Polr1d	91	89.256	ENSETEG00000012797	POLR1D	98	89.256	Echinops_telfairi
ENSMOCG00000021288	Polr1d	65	70.930	ENSEBUG00000011748	polr1d	60	70.930	Eptatretus_burgeri
ENSMOCG00000021288	Polr1d	96	95.312	ENSEASG00005022487	POLR1D	99	95.312	Equus_asinus_asinus
ENSMOCG00000021288	Polr1d	92	93.496	ENSEEUG00000013144	POLR1D	99	93.496	Erinaceus_europaeus
ENSMOCG00000021288	Polr1d	80	66.038	ENSELUG00000005105	rpac2	93	66.038	Esox_lucius
ENSMOCG00000021288	Polr1d	99	95.455	ENSFCAG00000030162	POLR1D	99	95.455	Felis_catus
ENSMOCG00000021288	Polr1d	72	76.042	ENSFALG00000011463	POLR1D	95	76.042	Ficedula_albicollis
ENSMOCG00000021288	Polr1d	99	94.697	ENSFDAG00000004463	POLR1D	99	94.697	Fukomys_damarensis
ENSMOCG00000021288	Polr1d	82	71.818	ENSFHEG00000015410	polr1d	96	71.818	Fundulus_heteroclitus
ENSMOCG00000021288	Polr1d	79	71.429	ENSGAFG00000001693	polr1d	92	71.429	Gambusia_affinis
ENSMOCG00000021288	Polr1d	83	69.643	ENSGACG00000018585	polr1d	95	69.643	Gasterosteus_aculeatus
ENSMOCG00000021288	Polr1d	81	75.000	ENSGAGG00000008503	POLR1D	95	75.000	Gopherus_agassizii
ENSMOCG00000021288	Polr1d	99	96.212	ENSGGOG00000004235	POLR1D	99	96.212	Gorilla_gorilla
ENSMOCG00000021288	Polr1d	80	69.159	ENSHBUG00000002111	polr1d	94	69.159	Haplochromis_burtoni
ENSMOCG00000021288	Polr1d	99	93.182	ENSHGLG00000003202	POLR1D	99	93.182	Heterocephalus_glaber_female
ENSMOCG00000021288	Polr1d	99	93.182	ENSHGLG00100009393	POLR1D	99	93.182	Heterocephalus_glaber_male
ENSMOCG00000021288	Polr1d	80	67.290	ENSHCOG00000003258	polr1d	94	67.290	Hippocampus_comes
ENSMOCG00000021288	Polr1d	82	72.477	ENSIPUG00000014810	polr1d	95	72.477	Ictalurus_punctatus
ENSMOCG00000021288	Polr1d	99	95.455	ENSSTOG00000013877	POLR1D	99	95.455	Ictidomys_tridecemlineatus
ENSMOCG00000021288	Polr1d	94	74.400	ENSJJAG00000021667	-	74	74.400	Jaculus_jaculus
ENSMOCG00000021288	Polr1d	95	90.000	ENSJJAG00000022671	-	98	93.162	Jaculus_jaculus
ENSMOCG00000021288	Polr1d	80	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSMOCG00000021288	Polr1d	79	70.476	ENSLBEG00000015919	polr1d	92	70.476	Labrus_bergylta
ENSMOCG00000021288	Polr1d	87	63.793	ENSLACG00000006810	POLR1D	96	63.793	Latimeria_chalumnae
ENSMOCG00000021288	Polr1d	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSMOCG00000021288	Polr1d	98	88.462	ENSLAFG00000032290	POLR1D	98	88.462	Loxodonta_africana
ENSMOCG00000021288	Polr1d	93	94.355	ENSMFAG00000045264	POLR1D	96	94.355	Macaca_fascicularis
ENSMOCG00000021288	Polr1d	100	75.940	ENSMMUG00000041570	-	100	75.940	Macaca_mulatta
ENSMOCG00000021288	Polr1d	86	94.783	ENSMMUG00000020386	POLR1D	99	94.783	Macaca_mulatta
ENSMOCG00000021288	Polr1d	99	95.455	ENSMNEG00000008630	-	99	95.455	Macaca_nemestrina
ENSMOCG00000021288	Polr1d	100	78.947	ENSMNEG00000038120	-	100	78.947	Macaca_nemestrina
ENSMOCG00000021288	Polr1d	99	95.455	ENSMLEG00000041048	-	99	95.455	Mandrillus_leucophaeus
ENSMOCG00000021288	Polr1d	99	85.606	ENSMLEG00000032251	-	99	85.606	Mandrillus_leucophaeus
ENSMOCG00000021288	Polr1d	76	69.307	ENSMAMG00000014834	polr1d	94	69.307	Mastacembelus_armatus
ENSMOCG00000021288	Polr1d	77	72.549	ENSMZEG00005006638	polr1d	90	72.549	Maylandia_zebra
ENSMOCG00000021288	Polr1d	69	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSMOCG00000021288	Polr1d	99	96.970	ENSMAUG00000001946	Polr1d	99	96.970	Mesocricetus_auratus
ENSMOCG00000021288	Polr1d	100	94.737	ENSMICG00000016883	-	100	94.737	Microcebus_murinus
ENSMOCG00000021288	Polr1d	98	77.863	ENSMICG00000007349	-	99	77.863	Microcebus_murinus
ENSMOCG00000021288	Polr1d	80	68.224	ENSMMOG00000009605	polr1d	94	68.224	Mola_mola
ENSMOCG00000021288	Polr1d	80	83.962	ENSMODG00000023881	POLR1D	93	83.962	Monodelphis_domestica
ENSMOCG00000021288	Polr1d	80	65.421	ENSMALG00000010652	polr1d	94	65.421	Monopterus_albus
ENSMOCG00000021288	Polr1d	99	91.667	MGP_CAROLIEiJ_G0028034	Polr1d	99	91.667	Mus_caroli
ENSMOCG00000021288	Polr1d	99	91.667	ENSMUSG00000029642	Polr1d	99	91.667	Mus_musculus
ENSMOCG00000021288	Polr1d	99	90.909	MGP_PahariEiJ_G0024600	Polr1d	99	90.909	Mus_pahari
ENSMOCG00000021288	Polr1d	99	90.909	MGP_SPRETEiJ_G0029032	Polr1d	99	90.909	Mus_spretus
ENSMOCG00000021288	Polr1d	98	82.443	ENSMLUG00000004118	-	98	82.443	Myotis_lucifugus
ENSMOCG00000021288	Polr1d	99	92.424	ENSMLUG00000027169	-	99	92.424	Myotis_lucifugus
ENSMOCG00000021288	Polr1d	86	93.913	ENSNGAG00000006014	Polr1d	99	93.913	Nannospalax_galili
ENSMOCG00000021288	Polr1d	80	69.159	ENSNBRG00000020327	polr1d	94	69.159	Neolamprologus_brichardi
ENSMOCG00000021288	Polr1d	99	96.212	ENSNLEG00000000358	POLR1D	99	96.212	Nomascus_leucogenys
ENSMOCG00000021288	Polr1d	99	78.030	ENSODEG00000014801	-	99	78.030	Octodon_degus
ENSMOCG00000021288	Polr1d	99	91.667	ENSODEG00000005294	-	99	91.667	Octodon_degus
ENSMOCG00000021288	Polr1d	79	80.952	ENSOANG00000008708	-	97	80.952	Ornithorhynchus_anatinus
ENSMOCG00000021288	Polr1d	99	93.939	ENSOCUG00000015706	POLR1D	81	93.939	Oryctolagus_cuniculus
ENSMOCG00000021288	Polr1d	80	68.224	ENSORLG00000010257	polr1d	94	68.224	Oryzias_latipes
ENSMOCG00000021288	Polr1d	83	66.667	ENSORLG00020000533	polr1d	75	66.667	Oryzias_latipes_hni
ENSMOCG00000021288	Polr1d	85	67.257	ENSORLG00015013267	polr1d	75	67.257	Oryzias_latipes_hsok
ENSMOCG00000021288	Polr1d	91	64.463	ENSOMEG00000014912	polr1d	81	64.463	Oryzias_melastigma
ENSMOCG00000021288	Polr1d	99	94.697	ENSOGAG00000014601	POLR1D	99	94.697	Otolemur_garnettii
ENSMOCG00000021288	Polr1d	93	91.935	ENSOARG00000017005	POLR1D	95	91.935	Ovis_aries
ENSMOCG00000021288	Polr1d	99	95.455	ENSPPAG00000028138	POLR1D	99	95.455	Pan_paniscus
ENSMOCG00000021288	Polr1d	99	95.455	ENSPPRG00000003381	POLR1D	99	95.455	Panthera_pardus
ENSMOCG00000021288	Polr1d	92	95.122	ENSPTIG00000018137	POLR1D	92	95.122	Panthera_tigris_altaica
ENSMOCG00000021288	Polr1d	99	96.212	ENSPTRG00000005734	POLR1D	99	96.212	Pan_troglodytes
ENSMOCG00000021288	Polr1d	99	95.455	ENSPANG00000020259	-	99	95.455	Papio_anubis
ENSMOCG00000021288	Polr1d	99	85.606	ENSPANG00000035051	-	99	85.606	Papio_anubis
ENSMOCG00000021288	Polr1d	86	62.609	ENSPKIG00000021891	polr1d	90	53.097	Paramormyrops_kingsleyae
ENSMOCG00000021288	Polr1d	87	72.650	ENSPSIG00000011822	POLR1D	91	72.650	Pelodiscus_sinensis
ENSMOCG00000021288	Polr1d	84	65.179	ENSPMGG00000010359	polr1d	97	65.179	Periophthalmus_magnuspinnatus
ENSMOCG00000021288	Polr1d	93	56.000	ENSPMGG00000012998	POLR1D	93	56.000	Periophthalmus_magnuspinnatus
ENSMOCG00000021288	Polr1d	99	93.939	ENSPEMG00000006336	-	99	93.939	Peromyscus_maniculatus_bairdii
ENSMOCG00000021288	Polr1d	81	58.333	ENSPMAG00000004228	polr1d	91	58.333	Petromyzon_marinus
ENSMOCG00000021288	Polr1d	80	83.962	ENSPCIG00000001673	POLR1D	93	83.962	Phascolarctos_cinereus
ENSMOCG00000021288	Polr1d	79	71.429	ENSPFOG00000023343	polr1d	92	72.500	Poecilia_formosa
ENSMOCG00000021288	Polr1d	79	71.429	ENSPLAG00000009675	polr1d	92	71.429	Poecilia_latipinna
ENSMOCG00000021288	Polr1d	79	71.429	ENSPMEG00000004628	polr1d	92	71.429	Poecilia_mexicana
ENSMOCG00000021288	Polr1d	79	71.429	ENSPREG00000022032	polr1d	92	71.429	Poecilia_reticulata
ENSMOCG00000021288	Polr1d	99	93.182	ENSPCOG00000028175	POLR1D	99	93.182	Propithecus_coquereli
ENSMOCG00000021288	Polr1d	80	69.159	ENSPNYG00000000107	polr1d	94	69.159	Pundamilia_nyererei
ENSMOCG00000021288	Polr1d	76	69.307	ENSPNAG00000001512	polr1d	87	68.269	Pygocentrus_nattereri
ENSMOCG00000021288	Polr1d	99	91.667	ENSRBIG00000000336	-	99	91.667	Rhinopithecus_bieti
ENSMOCG00000021288	Polr1d	99	95.455	ENSRBIG00000036378	-	99	95.455	Rhinopithecus_bieti
ENSMOCG00000021288	Polr1d	99	91.667	ENSRROG00000026751	-	99	91.667	Rhinopithecus_roxellana
ENSMOCG00000021288	Polr1d	99	95.455	ENSRROG00000042232	-	99	95.455	Rhinopithecus_roxellana
ENSMOCG00000021288	Polr1d	89	46.218	YNL113W	RPC19	84	46.218	Saccharomyces_cerevisiae
ENSMOCG00000021288	Polr1d	99	94.697	ENSSBOG00000028482	-	99	94.697	Saimiri_boliviensis_boliviensis
ENSMOCG00000021288	Polr1d	86	89.474	ENSSBOG00000030146	-	84	89.474	Saimiri_boliviensis_boliviensis
ENSMOCG00000021288	Polr1d	80	82.075	ENSSHAG00000001190	POLR1D	82	82.075	Sarcophilus_harrisii
ENSMOCG00000021288	Polr1d	82	73.394	ENSSFOG00015011375	polr1d	96	73.394	Scleropages_formosus
ENSMOCG00000021288	Polr1d	80	66.355	ENSSMAG00000011861	polr1d	94	66.355	Scophthalmus_maximus
ENSMOCG00000021288	Polr1d	80	65.421	ENSSDUG00000011930	polr1d	94	65.421	Seriola_dumerili
ENSMOCG00000021288	Polr1d	86	62.281	ENSSLDG00000023871	polr1d	97	62.281	Seriola_lalandi_dorsalis
ENSMOCG00000021288	Polr1d	99	93.182	ENSSARG00000007840	POLR1D	99	93.182	Sorex_araneus
ENSMOCG00000021288	Polr1d	79	73.333	ENSSPUG00000005786	POLR1D	95	70.270	Sphenodon_punctatus
ENSMOCG00000021288	Polr1d	79	70.476	ENSSPAG00000011764	polr1d	92	70.476	Stegastes_partitus
ENSMOCG00000021288	Polr1d	99	91.667	ENSSSCG00000009310	POLR1D	99	91.667	Sus_scrofa
ENSMOCG00000021288	Polr1d	72	76.042	ENSTGUG00000005450	POLR1D	100	76.042	Taeniopygia_guttata
ENSMOCG00000021288	Polr1d	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSMOCG00000021288	Polr1d	92	93.496	ENSTBEG00000007006	POLR1D	99	93.496	Tupaia_belangeri
ENSMOCG00000021288	Polr1d	99	94.697	ENSUAMG00000011413	POLR1D	99	94.697	Ursus_americanus
ENSMOCG00000021288	Polr1d	92	94.309	ENSUMAG00000016968	POLR1D	96	94.309	Ursus_maritimus
ENSMOCG00000021288	Polr1d	99	94.697	ENSVVUG00000009216	POLR1D	99	94.697	Vulpes_vulpes
ENSMOCG00000021288	Polr1d	74	74.490	ENSXCOG00000011731	polr1d	75	74.490	Xiphophorus_couchianus
ENSMOCG00000021288	Polr1d	74	74.490	ENSXMAG00000017538	polr1d	75	74.490	Xiphophorus_maculatus