EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000021585 (Gene tree)
Gene ID: 101996770
Gene Symbol: Tsen54
Alias: 0610034P02Rik
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 7847 bases
Position: chr7:78816596-78824442
Accession: 101996770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000025498	tRNA_int_end_N2	PF12928.7	4.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000029373	-	822	-	ENSMOCP00000025501	274 (aa)	-	-
ENSMOCT00000029370	-	1907	XM_005350739	ENSMOCP00000025498	524 (aa)	XP_005350796	UPI00038C1DE1

Gene Model

Click here to download ENSMOCG00000021585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000021585's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000021585	Tsen54	100	82.129	ENSG00000182173	TSEN54	99	91.429	Homo_sapiens
ENSMOCG00000021585	Tsen54	97	46.380	ENSAPOG00000009659	tsen54	99	43.897	Acanthochromis_polyacanthus
ENSMOCG00000021585	Tsen54	98	79.769	ENSAMEG00000009414	TSEN54	98	80.347	Ailuropoda_melanoleuca
ENSMOCG00000021585	Tsen54	97	46.380	ENSAOCG00000000152	tsen54	95	46.380	Amphiprion_ocellaris
ENSMOCG00000021585	Tsen54	97	45.988	ENSAPEG00000018931	tsen54	94	45.988	Amphiprion_percula
ENSMOCG00000021585	Tsen54	97	43.411	ENSATEG00000019860	tsen54	97	44.061	Anabas_testudineus
ENSMOCG00000021585	Tsen54	86	51.288	ENSAPLG00000009419	TSEN54	100	51.288	Anas_platyrhynchos
ENSMOCG00000021585	Tsen54	99	52.908	ENSACAG00000006714	TSEN54	99	52.908	Anolis_carolinensis
ENSMOCG00000021585	Tsen54	99	82.852	ENSANAG00000024061	TSEN54	99	82.857	Aotus_nancymaae
ENSMOCG00000021585	Tsen54	97	45.192	ENSACLG00000019800	tsen54	96	45.962	Astatotilapia_calliptera
ENSMOCG00000021585	Tsen54	97	47.758	ENSAMXG00000006546	tsen54	96	47.758	Astyanax_mexicanus
ENSMOCG00000021585	Tsen54	100	80.943	ENSBTAG00000000824	TSEN54	100	81.733	Bos_taurus
ENSMOCG00000021585	Tsen54	99	81.310	ENSCJAG00000014278	TSEN54	99	81.333	Callithrix_jacchus
ENSMOCG00000021585	Tsen54	100	80.791	ENSCAFG00000004798	TSEN54	100	81.356	Canis_familiaris
ENSMOCG00000021585	Tsen54	100	80.791	ENSCAFG00020000312	TSEN54	100	81.356	Canis_lupus_dingo
ENSMOCG00000021585	Tsen54	100	81.333	ENSCHIG00000019908	TSEN54	100	81.333	Capra_hircus
ENSMOCG00000021585	Tsen54	86	78.242	ENSTSYG00000037439	TSEN54	100	78.901	Carlito_syrichta
ENSMOCG00000021585	Tsen54	99	82.081	ENSCCAG00000036624	TSEN54	99	81.714	Cebus_capucinus
ENSMOCG00000021585	Tsen54	97	82.812	ENSCATG00000042877	TSEN54	99	82.667	Cercocebus_atys
ENSMOCG00000021585	Tsen54	97	82.779	ENSCLAG00000002924	TSEN54	99	82.443	Chinchilla_lanigera
ENSMOCG00000021585	Tsen54	100	82.319	ENSCSAG00000004809	TSEN54	100	82.700	Chlorocebus_sabaeus
ENSMOCG00000021585	Tsen54	99	55.159	ENSCPBG00000028071	TSEN54	99	55.159	Chrysemys_picta_bellii
ENSMOCG00000021585	Tsen54	100	81.749	ENSCANG00000028053	TSEN54	100	81.749	Colobus_angolensis_palliatus
ENSMOCG00000021585	Tsen54	100	93.893	ENSCGRG00001020029	Tsen54	100	93.893	Cricetulus_griseus_chok1gshd
ENSMOCG00000021585	Tsen54	84	93.651	ENSCGRG00000016289	Tsen54	100	93.651	Cricetulus_griseus_crigri
ENSMOCG00000021585	Tsen54	80	39.243	ENSCSEG00000020586	tsen54	99	39.243	Cynoglossus_semilaevis
ENSMOCG00000021585	Tsen54	80	43.160	ENSDARG00000036844	tsen54	99	43.160	Danio_rerio
ENSMOCG00000021585	Tsen54	100	75.141	ENSDNOG00000018452	TSEN54	100	77.024	Dasypus_novemcinctus
ENSMOCG00000021585	Tsen54	100	84.000	ENSDORG00000004073	Tsen54	100	84.000	Dipodomys_ordii
ENSMOCG00000021585	Tsen54	97	36.194	ENSEBUG00000005203	TSEN54	95	36.194	Eptatretus_burgeri
ENSMOCG00000021585	Tsen54	100	80.755	ENSEASG00005000579	TSEN54	100	80.755	Equus_asinus_asinus
ENSMOCG00000021585	Tsen54	100	80.943	ENSECAG00000004924	TSEN54	100	80.943	Equus_caballus
ENSMOCG00000021585	Tsen54	86	74.398	ENSEEUG00000008467	TSEN54	100	74.836	Erinaceus_europaeus
ENSMOCG00000021585	Tsen54	98	42.963	ENSELUG00000017703	tsen54	91	42.963	Esox_lucius
ENSMOCG00000021585	Tsen54	100	80.791	ENSFCAG00000023712	TSEN54	100	81.356	Felis_catus
ENSMOCG00000021585	Tsen54	94	52.823	ENSFALG00000001119	TSEN54	97	51.931	Ficedula_albicollis
ENSMOCG00000021585	Tsen54	86	83.814	ENSFDAG00000019090	TSEN54	99	83.814	Fukomys_damarensis
ENSMOCG00000021585	Tsen54	97	47.835	ENSFHEG00000005470	tsen54	96	47.835	Fundulus_heteroclitus
ENSMOCG00000021585	Tsen54	79	45.238	ENSGMOG00000013146	tsen54	98	45.238	Gadus_morhua
ENSMOCG00000021585	Tsen54	95	48.221	ENSGALG00000047163	TSEN54	98	48.221	Gallus_gallus
ENSMOCG00000021585	Tsen54	99	46.529	ENSGAFG00000005111	tsen54	99	47.092	Gambusia_affinis
ENSMOCG00000021585	Tsen54	96	43.883	ENSGACG00000014987	tsen54	99	44.466	Gasterosteus_aculeatus
ENSMOCG00000021585	Tsen54	100	55.926	ENSGAGG00000006825	TSEN54	99	55.926	Gopherus_agassizii
ENSMOCG00000021585	Tsen54	97	81.693	ENSGGOG00000009417	TSEN54	100	82.087	Gorilla_gorilla
ENSMOCG00000021585	Tsen54	87	43.949	ENSHBUG00000018296	tsen54	99	39.387	Haplochromis_burtoni
ENSMOCG00000021585	Tsen54	100	84.190	ENSHGLG00000007979	TSEN54	100	84.190	Heterocephalus_glaber_female
ENSMOCG00000021585	Tsen54	100	83.238	ENSHGLG00100005497	TSEN54	100	83.238	Heterocephalus_glaber_male
ENSMOCG00000021585	Tsen54	80	41.452	ENSHCOG00000007481	tsen54	99	42.130	Hippocampus_comes
ENSMOCG00000021585	Tsen54	99	41.714	ENSIPUG00000000590	tsen54	99	42.667	Ictalurus_punctatus
ENSMOCG00000021585	Tsen54	100	79.619	ENSSTOG00000012883	TSEN54	100	79.619	Ictidomys_tridecemlineatus
ENSMOCG00000021585	Tsen54	100	85.009	ENSJJAG00000007365	Tsen54	100	85.009	Jaculus_jaculus
ENSMOCG00000021585	Tsen54	97	46.198	ENSKMAG00000006944	tsen54	97	46.198	Kryptolebias_marmoratus
ENSMOCG00000021585	Tsen54	97	43.353	ENSLBEG00000004199	tsen54	97	43.738	Labrus_bergylta
ENSMOCG00000021585	Tsen54	97	44.592	ENSLACG00000009497	TSEN54	100	44.592	Latimeria_chalumnae
ENSMOCG00000021585	Tsen54	97	47.170	ENSLOCG00000011191	tsen54	97	48.008	Lepisosteus_oculatus
ENSMOCG00000021585	Tsen54	100	75.895	ENSLAFG00000011655	TSEN54	100	75.895	Loxodonta_africana
ENSMOCG00000021585	Tsen54	100	82.129	ENSMFAG00000000712	TSEN54	100	82.510	Macaca_fascicularis
ENSMOCG00000021585	Tsen54	100	81.939	ENSMNEG00000029199	TSEN54	100	82.319	Macaca_nemestrina
ENSMOCG00000021585	Tsen54	86	81.637	ENSMLEG00000044168	TSEN54	88	82.080	Mandrillus_leucophaeus
ENSMOCG00000021585	Tsen54	99	44.318	ENSMAMG00000019773	tsen54	99	44.318	Mastacembelus_armatus
ENSMOCG00000021585	Tsen54	97	45.000	ENSMZEG00005000884	tsen54	96	45.769	Maylandia_zebra
ENSMOCG00000021585	Tsen54	97	48.654	ENSMGAG00000009556	TSEN54	97	49.516	Meleagris_gallopavo
ENSMOCG00000021585	Tsen54	100	94.084	ENSMAUG00000016838	Tsen54	100	94.084	Mesocricetus_auratus
ENSMOCG00000021585	Tsen54	100	79.429	ENSMICG00000044012	TSEN54	100	80.190	Microcebus_murinus
ENSMOCG00000021585	Tsen54	96	42.406	ENSMMOG00000020189	tsen54	99	43.701	Mola_mola
ENSMOCG00000021585	Tsen54	98	66.792	ENSMODG00000007438	TSEN54	98	66.543	Monodelphis_domestica
ENSMOCG00000021585	Tsen54	99	42.259	ENSMALG00000020573	tsen54	99	42.779	Monopterus_albus
ENSMOCG00000021585	Tsen54	100	89.524	MGP_CAROLIEiJ_G0017417	Tsen54	100	89.524	Mus_caroli
ENSMOCG00000021585	Tsen54	100	89.905	ENSMUSG00000020781	Tsen54	100	89.905	Mus_musculus
ENSMOCG00000021585	Tsen54	100	88.952	MGP_PahariEiJ_G0018547	Tsen54	100	88.952	Mus_pahari
ENSMOCG00000021585	Tsen54	100	90.095	MGP_SPRETEiJ_G0018262	Tsen54	100	90.095	Mus_spretus
ENSMOCG00000021585	Tsen54	100	79.473	ENSMPUG00000013870	TSEN54	100	79.849	Mustela_putorius_furo
ENSMOCG00000021585	Tsen54	100	76.648	ENSMLUG00000015298	TSEN54	100	77.213	Myotis_lucifugus
ENSMOCG00000021585	Tsen54	100	86.857	ENSNGAG00000015673	Tsen54	100	86.857	Nannospalax_galili
ENSMOCG00000021585	Tsen54	89	63.169	ENSMEUG00000011908	TSEN54	100	63.169	Notamacropus_eugenii
ENSMOCG00000021585	Tsen54	100	74.335	ENSOPRG00000012513	TSEN54	100	74.335	Ochotona_princeps
ENSMOCG00000021585	Tsen54	97	45.769	ENSONIG00000009543	tsen54	96	45.769	Oreochromis_niloticus
ENSMOCG00000021585	Tsen54	99	71.857	ENSOCUG00000009875	TSEN54	99	73.358	Oryctolagus_cuniculus
ENSMOCG00000021585	Tsen54	97	46.047	ENSORLG00000000852	tsen54	97	46.047	Oryzias_latipes
ENSMOCG00000021585	Tsen54	97	45.652	ENSORLG00020018221	tsen54	97	45.652	Oryzias_latipes_hni
ENSMOCG00000021585	Tsen54	97	45.652	ENSORLG00015009413	tsen54	98	45.652	Oryzias_latipes_hsok
ENSMOCG00000021585	Tsen54	97	45.257	ENSOMEG00000014402	tsen54	94	45.257	Oryzias_melastigma
ENSMOCG00000021585	Tsen54	100	76.806	ENSOGAG00000001442	TSEN54	100	76.806	Otolemur_garnettii
ENSMOCG00000021585	Tsen54	86	76.535	ENSOARG00000010361	TSEN54	100	77.462	Ovis_aries
ENSMOCG00000021585	Tsen54	94	81.855	ENSPPAG00000043519	TSEN54	100	81.855	Pan_paniscus
ENSMOCG00000021585	Tsen54	100	80.603	ENSPPRG00000009162	TSEN54	100	81.168	Panthera_pardus
ENSMOCG00000021585	Tsen54	86	79.867	ENSPTIG00000019312	TSEN54	96	80.310	Panthera_tigris_altaica
ENSMOCG00000021585	Tsen54	100	81.939	ENSPTRG00000009646	TSEN54	100	82.319	Pan_troglodytes
ENSMOCG00000021585	Tsen54	99	81.905	ENSPANG00000020133	TSEN54	99	82.286	Papio_anubis
ENSMOCG00000021585	Tsen54	97	44.928	ENSPKIG00000023018	tsen54	100	45.434	Paramormyrops_kingsleyae
ENSMOCG00000021585	Tsen54	80	52.681	ENSPSIG00000012807	TSEN54	99	52.681	Pelodiscus_sinensis
ENSMOCG00000021585	Tsen54	92	36.821	ENSPMGG00000019578	tsen54	99	36.821	Periophthalmus_magnuspinnatus
ENSMOCG00000021585	Tsen54	100	93.893	ENSPEMG00000014857	Tsen54	100	93.893	Peromyscus_maniculatus_bairdii
ENSMOCG00000021585	Tsen54	99	47.070	ENSPFOG00000022740	tsen54	99	47.637	Poecilia_formosa
ENSMOCG00000021585	Tsen54	99	47.148	ENSPLAG00000014847	tsen54	99	47.719	Poecilia_latipinna
ENSMOCG00000021585	Tsen54	99	46.958	ENSPMEG00000022876	tsen54	99	47.529	Poecilia_mexicana
ENSMOCG00000021585	Tsen54	99	46.958	ENSPREG00000013090	tsen54	99	47.529	Poecilia_reticulata
ENSMOCG00000021585	Tsen54	91	77.568	ENSPPYG00000008629	TSEN54	100	77.568	Pongo_abelii
ENSMOCG00000021585	Tsen54	95	69.109	ENSPCAG00000002093	TSEN54	99	69.109	Procavia_capensis
ENSMOCG00000021585	Tsen54	100	82.129	ENSPCOG00000027880	TSEN54	100	82.890	Propithecus_coquereli
ENSMOCG00000021585	Tsen54	100	81.921	ENSPVAG00000008446	TSEN54	100	81.921	Pteropus_vampyrus
ENSMOCG00000021585	Tsen54	92	44.890	ENSPNYG00000010217	tsen54	99	45.219	Pundamilia_nyererei
ENSMOCG00000021585	Tsen54	99	44.906	ENSPNAG00000003770	tsen54	98	44.906	Pygocentrus_nattereri
ENSMOCG00000021585	Tsen54	100	90.095	ENSRNOG00000004598	Tsen54	100	90.095	Rattus_norvegicus
ENSMOCG00000021585	Tsen54	100	82.129	ENSRBIG00000043040	TSEN54	100	82.129	Rhinopithecus_bieti
ENSMOCG00000021585	Tsen54	100	81.939	ENSRROG00000030797	TSEN54	100	81.939	Rhinopithecus_roxellana
ENSMOCG00000021585	Tsen54	99	78.476	ENSSBOG00000013543	TSEN54	99	78.857	Saimiri_boliviensis_boliviensis
ENSMOCG00000021585	Tsen54	99	64.728	ENSSHAG00000018127	TSEN54	98	64.728	Sarcophilus_harrisii
ENSMOCG00000021585	Tsen54	81	43.056	ENSSFOG00015004093	tsen54	100	43.287	Scleropages_formosus
ENSMOCG00000021585	Tsen54	97	44.814	ENSSDUG00000021506	tsen54	97	44.814	Seriola_dumerili
ENSMOCG00000021585	Tsen54	97	44.942	ENSSLDG00000016303	tsen54	97	44.942	Seriola_lalandi_dorsalis
ENSMOCG00000021585	Tsen54	80	52.347	ENSSPUG00000008988	TSEN54	97	52.103	Sphenodon_punctatus
ENSMOCG00000021585	Tsen54	92	45.510	ENSSPAG00000008098	-	99	45.510	Stegastes_partitus
ENSMOCG00000021585	Tsen54	80	41.469	ENSSPAG00000008047	tsen54	99	41.469	Stegastes_partitus
ENSMOCG00000021585	Tsen54	100	80.038	ENSSSCG00000036852	TSEN54	100	80.603	Sus_scrofa
ENSMOCG00000021585	Tsen54	86	51.991	ENSTGUG00000008548	TSEN54	100	51.991	Taeniopygia_guttata
ENSMOCG00000021585	Tsen54	97	46.109	ENSTRUG00000004230	tsen54	96	46.304	Takifugu_rubripes
ENSMOCG00000021585	Tsen54	98	45.298	ENSTNIG00000011281	tsen54	99	45.489	Tetraodon_nigroviridis
ENSMOCG00000021585	Tsen54	86	80.131	ENSTTRG00000015828	TSEN54	100	80.568	Tursiops_truncatus
ENSMOCG00000021585	Tsen54	81	77.907	ENSUAMG00000010045	TSEN54	100	77.907	Ursus_americanus
ENSMOCG00000021585	Tsen54	84	78.202	ENSUMAG00000008979	TSEN54	100	78.876	Ursus_maritimus
ENSMOCG00000021585	Tsen54	97	80.702	ENSVVUG00000011411	TSEN54	98	81.165	Vulpes_vulpes
ENSMOCG00000021585	Tsen54	98	49.611	ENSXETG00000012532	tsen54	99	70.833	Xenopus_tropicalis
ENSMOCG00000021585	Tsen54	97	36.381	ENSXCOG00000018245	tsen54	99	44.316	Xiphophorus_couchianus
ENSMOCG00000021585	Tsen54	99	47.719	ENSXMAG00000018818	tsen54	99	47.719	Xiphophorus_maculatus