EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000021639 (Gene tree)
Gene ID: 101989559
Gene Symbol: Rab42
Alias: 9530096D07Rik|Rab42-ps
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 1240 bases
Position: chr10:52530223-52531462
Accession: 101989559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000025565	MMR_HSR1	PF01926.23	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000029437	-	648	XM_005353130	ENSMOCP00000025565	215 (aa)	XP_005353187	UPI00038C20B3

Gene Model

Click here to download ENSMOCG00000021639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000021639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000021639	Rab42	91	39.394	ENSMOCG00000014140	Rab2a	98	38.028
ENSMOCG00000021639	Rab42	82	38.418	ENSMOCG00000012667	Rab11b	79	38.418
ENSMOCG00000021639	Rab42	77	35.329	ENSMOCG00000012268	Rab22a	84	35.329
ENSMOCG00000021639	Rab42	91	35.204	ENSMOCG00000018531	-	88	35.204
ENSMOCG00000021639	Rab42	93	37.255	ENSMOCG00000015920	Rab9	98	37.255
ENSMOCG00000021639	Rab42	87	36.702	ENSMOCG00000013044	Rab18	88	36.702
ENSMOCG00000021639	Rab42	87	41.270	ENSMOCG00000013161	Rab2b	99	38.991
ENSMOCG00000021639	Rab42	79	32.184	ENSMOCG00000004529	Rab36	64	33.333
ENSMOCG00000021639	Rab42	90	40.206	ENSMOCG00000003760	Rab14	88	40.206
ENSMOCG00000021639	Rab42	78	40.828	ENSMOCG00000010953	Rab25	77	40.828
ENSMOCG00000021639	Rab42	77	40.120	ENSMOCG00000019999	Rab35	88	38.251
ENSMOCG00000021639	Rab42	96	35.577	ENSMOCG00000014387	Rab6a	94	35.577
ENSMOCG00000021639	Rab42	96	33.645	ENSMOCG00000002760	Rab7	96	33.645
ENSMOCG00000021639	Rab42	78	34.524	ENSMOCG00000022240	Rheb	87	34.524
ENSMOCG00000021639	Rab42	75	36.196	ENSMOCG00000000452	Rab12	88	32.000
ENSMOCG00000021639	Rab42	78	37.278	ENSMOCG00000018796	Rab15	77	37.278
ENSMOCG00000021639	Rab42	80	42.286	ENSMOCG00000009821	-	84	42.286
ENSMOCG00000021639	Rab42	75	31.098	ENSMOCG00000016580	Rab34	62	31.098
ENSMOCG00000021639	Rab42	69	39.474	ENSMOCG00000020142	Rab33a	62	39.474
ENSMOCG00000021639	Rab42	82	37.500	ENSMOCG00000010381	Rab9b	90	37.500
ENSMOCG00000021639	Rab42	64	35.036	ENSMOCG00000000744	Hras	86	32.143
ENSMOCG00000021639	Rab42	96	39.614	ENSMOCG00000017022	Rab1a	97	39.614
ENSMOCG00000021639	Rab42	64	36.496	ENSMOCG00000011313	Kras	86	33.735
ENSMOCG00000021639	Rab42	80	39.655	ENSMOCG00000021138	Rab11a	78	39.655
ENSMOCG00000021639	Rab42	81	38.286	ENSMOCG00000006448	Rab17	80	38.286
ENSMOCG00000021639	Rab42	80	37.209	ENSMOCG00000000444	Rab23	70	37.209
ENSMOCG00000021639	Rab42	96	34.615	ENSMOCG00000001455	Rab6b	94	34.615
ENSMOCG00000021639	Rab42	87	48.128	ENSMOCG00000006994	Rab39b	86	48.128
ENSMOCG00000021639	Rab42	64	36.496	ENSMOCG00000022441	Nras	86	33.333
ENSMOCG00000021639	Rab42	98	38.532	ENSMOCG00000021448	Rab13	98	38.532
ENSMOCG00000021639	Rab42	93	35.323	ENSMOCG00000009706	Rab5a	89	35.323
ENSMOCG00000021639	Rab42	81	42.857	ENSMOCG00000014673	Rab1b	85	42.857
ENSMOCG00000021639	Rab42	80	38.798	ENSMOCG00000019866	Rab33b	78	38.798

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000021639	Rab42	100	80.093	ENSANAG00000035487	-	100	80.093	Aotus_nancymaae
ENSMOCG00000021639	Rab42	100	75.909	ENSBTAG00000021525	-	100	75.909	Bos_taurus
ENSMOCG00000021639	Rab42	99	62.326	ENSCPBG00000011245	RAB42	99	63.462	Chrysemys_picta_bellii
ENSMOCG00000021639	Rab42	100	92.130	ENSCGRG00001019426	Rab42	100	92.130	Cricetulus_griseus_chok1gshd
ENSMOCG00000021639	Rab42	100	77.778	ENSDORG00000023607	Rab42	100	77.778	Dipodomys_ordii
ENSMOCG00000021639	Rab42	100	80.734	ENSFCAG00000037124	-	100	81.193	Felis_catus
ENSMOCG00000021639	Rab42	99	61.682	ENSGAGG00000004921	RAB42	100	61.682	Gopherus_agassizii
ENSMOCG00000021639	Rab42	100	80.184	ENSSTOG00000000084	-	100	80.184	Ictidomys_tridecemlineatus
ENSMOCG00000021639	Rab42	100	92.593	ENSMAUG00000020223	Rab42	100	92.593	Mesocricetus_auratus
ENSMOCG00000021639	Rab42	100	80.275	ENSMICG00000029915	-	100	80.275	Microcebus_murinus
ENSMOCG00000021639	Rab42	99	65.116	ENSMODG00000023873	-	98	65.116	Monodelphis_domestica
ENSMOCG00000021639	Rab42	100	85.253	ENSNGAG00000015676	Rab42	100	85.253	Nannospalax_galili
ENSMOCG00000021639	Rab42	100	80.734	ENSOGAG00000006951	-	100	80.734	Otolemur_garnettii
ENSMOCG00000021639	Rab42	97	62.857	ENSPSIG00000006831	RAB42	92	62.857	Pelodiscus_sinensis
ENSMOCG00000021639	Rab42	100	81.651	ENSPCOG00000008605	-	100	81.651	Propithecus_coquereli
ENSMOCG00000021639	Rab42	96	75.962	ENSSARG00000007565	-	100	75.962	Sorex_araneus
ENSMOCG00000021639	Rab42	99	60.465	ENSSPUG00000010337	RAB42	99	60.465	Sphenodon_punctatus
ENSMOCG00000021639	Rab42	100	78.636	ENSSSCG00000030432	-	100	78.636	Sus_scrofa