EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMOCG00000021853 (Gene tree)
Gene ID: 102001698
Gene Symbol: Prdm10
Alias: LOC382066|tristanin
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 64502 bases
Position: chr5:25544200-25608701
Accession: 102001698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000025880	zf-C2H2	PF00096.26	3.3e-28	1	4
ENSMOCP00000025880	zf-C2H2	PF00096.26	3.3e-28	2	4
ENSMOCP00000025880	zf-C2H2	PF00096.26	3.3e-28	3	4
ENSMOCP00000025880	zf-C2H2	PF00096.26	3.3e-28	4	4
ENSMOCP00000025878	zf-C2H2	PF00096.26	1.4e-27	1	4
ENSMOCP00000025878	zf-C2H2	PF00096.26	1.4e-27	2	4
ENSMOCP00000025878	zf-C2H2	PF00096.26	1.4e-27	3	4
ENSMOCP00000025878	zf-C2H2	PF00096.26	1.4e-27	4	4
ENSMOCP00000025880	zf-met	PF12874.7	4.9e-09	1	2
ENSMOCP00000025880	zf-met	PF12874.7	4.9e-09	2	2
ENSMOCP00000025878	zf-met	PF12874.7	2.9e-06	1	2
ENSMOCP00000025878	zf-met	PF12874.7	2.9e-06	2	2
ENSMOCP00000025880	zf-C2H2_jaz	PF12171.8	1.2e-14	1	1
ENSMOCP00000025878	zf-C2H2_jaz	PF12171.8	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000029754	-	3270	-	ENSMOCP00000025880	1089 (aa)	-	-
ENSMOCT00000029752	-	3516	XM_013346337	ENSMOCP00000025878	1171 (aa)	XP_013201791	-

Gene Model

Click here to download ENSMOCG00000021853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000021853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMOCG00000021853	Prdm10	62	31.892	ENSMOCG00000016267	Prdm5	97	36.813
ENSMOCG00000021853	Prdm10	51	37.234	ENSMOCG00000022870	Zfp236	59	37.234

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000021853	Prdm10	100	90.878	ENSG00000170325	PRDM10	100	92.971	Homo_sapiens
ENSMOCG00000021853	Prdm10	99	95.833	ENSAMEG00000002425	PRDM10	100	86.999	Ailuropoda_melanoleuca
ENSMOCG00000021853	Prdm10	98	84.615	ENSAPLG00000004858	PRDM10	100	81.788	Anas_platyrhynchos
ENSMOCG00000021853	Prdm10	100	78.581	ENSANAG00000022064	PRDM10	100	77.111	Aotus_nancymaae
ENSMOCG00000021853	Prdm10	100	89.670	ENSBTAG00000019001	PRDM10	100	90.082	Bos_taurus
ENSMOCG00000021853	Prdm10	100	90.702	ENSCJAG00000009235	PRDM10	100	90.955	Callithrix_jacchus
ENSMOCG00000021853	Prdm10	100	89.940	ENSCAFG00000010164	PRDM10	100	90.111	Canis_familiaris
ENSMOCG00000021853	Prdm10	100	90.878	ENSCAFG00020010152	PRDM10	96	98.667	Canis_lupus_dingo
ENSMOCG00000021853	Prdm10	100	89.924	ENSCHIG00000026530	PRDM10	100	89.924	Capra_hircus
ENSMOCG00000021853	Prdm10	99	95.890	ENSTSYG00000000544	PRDM10	100	91.976	Carlito_syrichta
ENSMOCG00000021853	Prdm10	100	84.968	ENSCAPG00000017296	PRDM10	98	87.438	Cavia_aperea
ENSMOCG00000021853	Prdm10	100	85.339	ENSCPOG00000000389	PRDM10	98	86.037	Cavia_porcellus
ENSMOCG00000021853	Prdm10	100	90.617	ENSCCAG00000024567	PRDM10	100	90.955	Cebus_capucinus
ENSMOCG00000021853	Prdm10	100	91.032	ENSCATG00000040031	PRDM10	100	91.371	Cercocebus_atys
ENSMOCG00000021853	Prdm10	100	90.901	ENSCLAG00000014605	PRDM10	99	91.956	Chinchilla_lanigera
ENSMOCG00000021853	Prdm10	100	91.201	ENSCSAG00000002202	PRDM10	100	91.540	Chlorocebus_sabaeus
ENSMOCG00000021853	Prdm10	100	84.515	ENSCPBG00000026880	PRDM10	99	79.201	Chrysemys_picta_bellii
ENSMOCG00000021853	Prdm10	100	91.040	ENSCANG00000032669	PRDM10	100	91.378	Colobus_angolensis_palliatus
ENSMOCG00000021853	Prdm10	99	97.403	ENSCGRG00001021647	Prdm10	98	95.652	Cricetulus_griseus_chok1gshd
ENSMOCG00000021853	Prdm10	99	97.403	ENSCGRG00000006562	Prdm10	98	95.652	Cricetulus_griseus_crigri
ENSMOCG00000021853	Prdm10	83	89.754	ENSDNOG00000001366	PRDM10	95	89.754	Dasypus_novemcinctus
ENSMOCG00000021853	Prdm10	100	91.731	ENSDORG00000014292	Prdm10	100	91.816	Dipodomys_ordii
ENSMOCG00000021853	Prdm10	99	98.438	ENSEASG00005022914	PRDM10	99	92.110	Equus_asinus_asinus
ENSMOCG00000021853	Prdm10	99	98.438	ENSECAG00000011499	PRDM10	99	92.024	Equus_caballus
ENSMOCG00000021853	Prdm10	99	95.890	ENSFCAG00000004111	PRDM10	96	90.595	Felis_catus
ENSMOCG00000021853	Prdm10	98	84.870	ENSFALG00000004873	PRDM10	100	78.513	Ficedula_albicollis
ENSMOCG00000021853	Prdm10	99	93.506	ENSFDAG00000017311	PRDM10	100	89.833	Fukomys_damarensis
ENSMOCG00000021853	Prdm10	98	84.715	ENSGALG00000033660	PRDM10	99	82.472	Gallus_gallus
ENSMOCG00000021853	Prdm10	99	65.066	ENSGACG00000012293	prdm10	99	67.949	Gasterosteus_aculeatus
ENSMOCG00000021853	Prdm10	100	83.333	ENSGAGG00000012523	PRDM10	99	80.185	Gopherus_agassizii
ENSMOCG00000021853	Prdm10	99	95.890	ENSGGOG00000015359	PRDM10	100	91.674	Gorilla_gorilla
ENSMOCG00000021853	Prdm10	100	92.252	ENSHGLG00000001106	PRDM10	98	92.707	Heterocephalus_glaber_female
ENSMOCG00000021853	Prdm10	100	92.252	ENSHGLG00100002350	PRDM10	98	92.707	Heterocephalus_glaber_male
ENSMOCG00000021853	Prdm10	100	91.801	ENSSTOG00000002015	PRDM10	100	92.054	Ictidomys_tridecemlineatus
ENSMOCG00000021853	Prdm10	95	92.820	ENSJJAG00000021493	Prdm10	100	92.245	Jaculus_jaculus
ENSMOCG00000021853	Prdm10	99	93.151	ENSLAFG00000031867	PRDM10	100	86.482	Loxodonta_africana
ENSMOCG00000021853	Prdm10	100	91.117	ENSMFAG00000031008	PRDM10	100	91.455	Macaca_fascicularis
ENSMOCG00000021853	Prdm10	100	91.117	ENSMMUG00000017555	PRDM10	100	91.455	Macaca_mulatta
ENSMOCG00000021853	Prdm10	100	91.032	ENSMNEG00000036493	PRDM10	100	91.371	Macaca_nemestrina
ENSMOCG00000021853	Prdm10	94	86.100	ENSMLEG00000042028	PRDM10	100	86.100	Mandrillus_leucophaeus
ENSMOCG00000021853	Prdm10	98	84.669	ENSMGAG00000001112	PRDM10	100	79.231	Meleagris_gallopavo
ENSMOCG00000021853	Prdm10	99	97.260	ENSMICG00000013888	PRDM10	100	91.455	Microcebus_murinus
ENSMOCG00000021853	Prdm10	81	84.018	ENSMODG00000004979	PRDM10	99	84.761	Monodelphis_domestica
ENSMOCG00000021853	Prdm10	100	94.889	ENSMUSG00000042496	Prdm10	100	95.315	Mus_musculus
ENSMOCG00000021853	Prdm10	100	94.643	MGP_SPRETEiJ_G0033061	-	100	94.643	Mus_spretus
ENSMOCG00000021853	Prdm10	99	97.260	ENSMPUG00000008711	PRDM10	99	90.093	Mustela_putorius_furo
ENSMOCG00000021853	Prdm10	99	95.890	ENSMLUG00000013051	PRDM10	100	89.518	Myotis_lucifugus
ENSMOCG00000021853	Prdm10	100	93.595	ENSNGAG00000000580	Prdm10	100	93.595	Nannospalax_galili
ENSMOCG00000021853	Prdm10	100	91.032	ENSNLEG00000007488	PRDM10	100	91.371	Nomascus_leucogenys
ENSMOCG00000021853	Prdm10	100	89.900	ENSODEG00000005309	PRDM10	100	89.754	Octodon_degus
ENSMOCG00000021853	Prdm10	99	78.988	ENSOANG00000000577	-	100	75.417	Ornithorhynchus_anatinus
ENSMOCG00000021853	Prdm10	99	91.089	ENSOCUG00000003736	PRDM10	100	90.000	Oryctolagus_cuniculus
ENSMOCG00000021853	Prdm10	100	91.634	ENSOGAG00000010723	PRDM10	100	90.304	Otolemur_garnettii
ENSMOCG00000021853	Prdm10	100	89.924	ENSOARG00000014507	PRDM10	100	89.924	Ovis_aries
ENSMOCG00000021853	Prdm10	99	94.521	ENSPPAG00000042881	PRDM10	100	91.504	Pan_paniscus
ENSMOCG00000021853	Prdm10	99	95.890	ENSPPRG00000007002	PRDM10	100	90.262	Panthera_pardus
ENSMOCG00000021853	Prdm10	99	95.890	ENSPTIG00000013331	PRDM10	100	90.347	Panthera_tigris_altaica
ENSMOCG00000021853	Prdm10	99	95.890	ENSPTRG00000004477	PRDM10	100	91.589	Pan_troglodytes
ENSMOCG00000021853	Prdm10	100	92.078	ENSPANG00000017470	PRDM10	100	92.419	Papio_anubis
ENSMOCG00000021853	Prdm10	100	95.803	ENSPEMG00000014985	Prdm10	100	95.741	Peromyscus_maniculatus_bairdii
ENSMOCG00000021853	Prdm10	100	91.047	ENSPPYG00000004061	PRDM10	100	91.301	Pongo_abelii
ENSMOCG00000021853	Prdm10	91	94.231	ENSPCAG00000014514	PRDM10	100	81.165	Procavia_capensis
ENSMOCG00000021853	Prdm10	99	97.260	ENSPCOG00000023406	PRDM10	100	77.580	Propithecus_coquereli
ENSMOCG00000021853	Prdm10	99	95.890	ENSPVAG00000012764	PRDM10	100	90.549	Pteropus_vampyrus
ENSMOCG00000021853	Prdm10	99	97.403	ENSRNOG00000007853	Prdm10	100	95.137	Rattus_norvegicus
ENSMOCG00000021853	Prdm10	100	91.047	ENSRBIG00000030924	PRDM10	100	91.301	Rhinopithecus_bieti
ENSMOCG00000021853	Prdm10	100	91.047	ENSRROG00000034334	PRDM10	100	91.301	Rhinopithecus_roxellana
ENSMOCG00000021853	Prdm10	99	95.890	ENSSBOG00000008773	PRDM10	100	91.047	Saimiri_boliviensis_boliviensis
ENSMOCG00000021853	Prdm10	99	83.684	ENSSHAG00000004503	PRDM10	99	83.768	Sarcophilus_harrisii
ENSMOCG00000021853	Prdm10	69	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSMOCG00000021853	Prdm10	100	78.711	ENSSPUG00000001178	PRDM10	97	81.978	Sphenodon_punctatus
ENSMOCG00000021853	Prdm10	99	95.890	ENSSSCG00000015243	PRDM10	100	90.183	Sus_scrofa
ENSMOCG00000021853	Prdm10	98	84.615	ENSTGUG00000000530	PRDM10	100	81.329	Taeniopygia_guttata
ENSMOCG00000021853	Prdm10	94	94.502	ENSTBEG00000007221	PRDM10	94	89.693	Tupaia_belangeri
ENSMOCG00000021853	Prdm10	100	88.007	ENSTTRG00000009189	PRDM10	100	87.595	Tursiops_truncatus
ENSMOCG00000021853	Prdm10	91	92.929	ENSUAMG00000018832	PRDM10	96	92.157	Ursus_americanus
ENSMOCG00000021853	Prdm10	100	90.597	ENSUMAG00000003167	PRDM10	97	94.805	Ursus_maritimus
ENSMOCG00000021853	Prdm10	99	97.260	ENSVVUG00000019878	PRDM10	100	89.924	Vulpes_vulpes
ENSMOCG00000021853	Prdm10	100	71.372	ENSXETG00000032173	PRDM10	90	71.372	Xenopus_tropicalis