EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMOCG00000021937 (Gene tree)
Gene ID: 101987266
Gene Symbol: Cmss1
Alias: 1110001A06Rik|2610528E23Rik|4930572F24Rik
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Microtus_ochrogaster
Status: putative
Strand: Plus strand
Length: 290312 bases
Position: chr2:46922964-47213275
Accession: 101987266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMOCP00000025996	CMS1	PF14617.6	1.6e-31	1	1
ENSMOCP00000025996	DEAD	PF00270.29	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMOCT00000029870	-	828	XM_013351814	ENSMOCP00000025996	275 (aa)	XP_013207268	-

Gene Model

Click here to download ENSMOCG00000021937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMOCG00000021937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMOCG00000021937	Cmss1	100	81.362	ENSG00000184220	CMSS1	98	87.500	Homo_sapiens
ENSMOCG00000021937	Cmss1	73	63.366	ENSAPOG00000010604	cmss1	92	58.974	Acanthochromis_polyacanthus
ENSMOCG00000021937	Cmss1	93	81.467	ENSAMEG00000004092	CMSS1	100	81.467	Ailuropoda_melanoleuca
ENSMOCG00000021937	Cmss1	73	53.465	ENSACIG00000021854	cmss1	75	53.465	Amphilophus_citrinellus
ENSMOCG00000021937	Cmss1	100	50.173	ENSAOCG00000013361	cmss1	100	51.877	Amphiprion_ocellaris
ENSMOCG00000021937	Cmss1	100	50.345	ENSAPEG00000005829	cmss1	100	52.041	Amphiprion_percula
ENSMOCG00000021937	Cmss1	100	52.901	ENSATEG00000008209	cmss1	100	53.356	Anabas_testudineus
ENSMOCG00000021937	Cmss1	83	69.130	ENSAPLG00000010542	CMSS1	100	69.130	Anas_platyrhynchos
ENSMOCG00000021937	Cmss1	91	62.791	ENSACAG00000011065	CMSS1	95	63.178	Anolis_carolinensis
ENSMOCG00000021937	Cmss1	100	79.643	ENSANAG00000023565	CMSS1	100	79.643	Aotus_nancymaae
ENSMOCG00000021937	Cmss1	100	50.512	ENSACLG00000027294	cmss1	100	51.014	Astatotilapia_calliptera
ENSMOCG00000021937	Cmss1	100	46.259	ENSAMXG00000002046	cmss1	100	46.259	Astyanax_mexicanus
ENSMOCG00000021937	Cmss1	100	81.362	ENSBTAG00000013663	CMSS1	100	81.362	Bos_taurus
ENSMOCG00000021937	Cmss1	100	80.000	ENSCJAG00000000610	CMSS1	100	80.000	Callithrix_jacchus
ENSMOCG00000021937	Cmss1	93	82.946	ENSCAFG00000009230	CMSS1	93	82.946	Canis_familiaris
ENSMOCG00000021937	Cmss1	93	82.625	ENSCAFG00020009464	-	95	82.625	Canis_lupus_dingo
ENSMOCG00000021937	Cmss1	79	80.184	ENSCAFG00020024156	-	68	80.184	Canis_lupus_dingo
ENSMOCG00000021937	Cmss1	96	77.323	ENSCHIG00000013003	CMSS1	98	77.037	Capra_hircus
ENSMOCG00000021937	Cmss1	96	76.753	ENSTSYG00000009266	CMSS1	99	79.070	Carlito_syrichta
ENSMOCG00000021937	Cmss1	81	67.713	ENSCAPG00000013584	CMSS1	88	73.545	Cavia_aperea
ENSMOCG00000021937	Cmss1	100	79.211	ENSCPOG00000014680	CMSS1	100	79.211	Cavia_porcellus
ENSMOCG00000021937	Cmss1	100	81.071	ENSCCAG00000034685	CMSS1	100	81.071	Cebus_capucinus
ENSMOCG00000021937	Cmss1	100	81.004	ENSCATG00000031980	CMSS1	100	81.004	Cercocebus_atys
ENSMOCG00000021937	Cmss1	83	83.843	ENSCLAG00000011241	CMSS1	98	83.843	Chinchilla_lanigera
ENSMOCG00000021937	Cmss1	88	82.449	ENSCSAG00000006024	CMSS1	100	82.449	Chlorocebus_sabaeus
ENSMOCG00000021937	Cmss1	100	62.950	ENSCHOG00000012098	CMSS1	100	62.950	Choloepus_hoffmanni
ENSMOCG00000021937	Cmss1	72	41.206	ENSCING00000014848	-	99	42.246	Ciona_intestinalis
ENSMOCG00000021937	Cmss1	100	80.645	ENSCANG00000031337	CMSS1	100	80.645	Colobus_angolensis_palliatus
ENSMOCG00000021937	Cmss1	100	87.410	ENSCGRG00001014305	Cmss1	100	87.410	Cricetulus_griseus_chok1gshd
ENSMOCG00000021937	Cmss1	92	87.938	ENSCGRG00000006722	Cmss1	100	87.938	Cricetulus_griseus_crigri
ENSMOCG00000021937	Cmss1	100	49.832	ENSCSEG00000004958	cmss1	100	50.676	Cynoglossus_semilaevis
ENSMOCG00000021937	Cmss1	100	50.340	ENSCVAG00000005039	cmss1	100	51.178	Cyprinodon_variegatus
ENSMOCG00000021937	Cmss1	100	44.932	ENSDARG00000112579	cmss1	100	45.946	Danio_rerio
ENSMOCG00000021937	Cmss1	94	80.309	ENSDNOG00000040418	CMSS1	92	80.859	Dasypus_novemcinctus
ENSMOCG00000021937	Cmss1	100	81.720	ENSDORG00000010461	Cmss1	100	81.720	Dipodomys_ordii
ENSMOCG00000021937	Cmss1	96	74.349	ENSEASG00005010966	CMSS1	99	83.562	Equus_asinus_asinus
ENSMOCG00000021937	Cmss1	95	75.849	ENSECAG00000015662	CMSS1	99	81.416	Equus_caballus
ENSMOCG00000021937	Cmss1	100	53.047	ENSEEUG00000007624	-	100	53.047	Erinaceus_europaeus
ENSMOCG00000021937	Cmss1	100	49.836	ENSELUG00000019459	cmss1	100	51.475	Esox_lucius
ENSMOCG00000021937	Cmss1	100	84.588	ENSFCAG00000044577	CMSS1	100	84.588	Felis_catus
ENSMOCG00000021937	Cmss1	83	67.686	ENSFALG00000005816	CMSS1	97	67.686	Ficedula_albicollis
ENSMOCG00000021937	Cmss1	83	83.772	ENSFDAG00000012577	CMSS1	100	83.772	Fukomys_damarensis
ENSMOCG00000021937	Cmss1	82	58.696	ENSFHEG00000012008	cmss1	95	58.696	Fundulus_heteroclitus
ENSMOCG00000021937	Cmss1	99	50.709	ENSGMOG00000016729	cmss1	100	51.773	Gadus_morhua
ENSMOCG00000021937	Cmss1	86	68.220	ENSGALG00000015267	CMSS1	90	68.220	Gallus_gallus
ENSMOCG00000021937	Cmss1	75	62.621	ENSGAFG00000021217	cmss1	77	62.871	Gambusia_affinis
ENSMOCG00000021937	Cmss1	99	47.535	ENSGACG00000002798	cmss1	100	48.239	Gasterosteus_aculeatus
ENSMOCG00000021937	Cmss1	87	69.835	ENSGAGG00000019861	CMSS1	94	69.835	Gopherus_agassizii
ENSMOCG00000021937	Cmss1	93	81.783	ENSGGOG00000014125	CMSS1	99	81.783	Gorilla_gorilla
ENSMOCG00000021937	Cmss1	100	49.658	ENSHBUG00000008431	cmss1	100	50.508	Haplochromis_burtoni
ENSMOCG00000021937	Cmss1	90	81.377	ENSHGLG00000019481	CMSS1	99	81.377	Heterocephalus_glaber_female
ENSMOCG00000021937	Cmss1	92	80.632	ENSHGLG00100010314	CMSS1	99	80.632	Heterocephalus_glaber_male
ENSMOCG00000021937	Cmss1	100	51.852	ENSHCOG00000003222	cmss1	100	51.852	Hippocampus_comes
ENSMOCG00000021937	Cmss1	100	48.299	ENSIPUG00000011591	cmss1	100	48.276	Ictalurus_punctatus
ENSMOCG00000021937	Cmss1	100	81.362	ENSSTOG00000019366	CMSS1	100	81.362	Ictidomys_tridecemlineatus
ENSMOCG00000021937	Cmss1	100	77.500	ENSJJAG00000014894	Cmss1	100	77.500	Jaculus_jaculus
ENSMOCG00000021937	Cmss1	73	53.465	ENSKMAG00000002390	cmss1	100	48.800	Kryptolebias_marmoratus
ENSMOCG00000021937	Cmss1	73	58.621	ENSLBEG00000006298	cmss1	95	53.942	Labrus_bergylta
ENSMOCG00000021937	Cmss1	83	66.087	ENSLACG00000009293	CMSS1	100	66.087	Latimeria_chalumnae
ENSMOCG00000021937	Cmss1	100	50.883	ENSLOCG00000009391	cmss1	100	51.590	Lepisosteus_oculatus
ENSMOCG00000021937	Cmss1	83	84.211	ENSLAFG00000017509	CMSS1	100	84.211	Loxodonta_africana
ENSMOCG00000021937	Cmss1	100	81.720	ENSMFAG00000045006	CMSS1	100	81.720	Macaca_fascicularis
ENSMOCG00000021937	Cmss1	100	81.362	ENSMMUG00000002939	CMSS1	100	81.362	Macaca_mulatta
ENSMOCG00000021937	Cmss1	100	81.362	ENSMNEG00000031315	CMSS1	100	81.362	Macaca_nemestrina
ENSMOCG00000021937	Cmss1	100	81.004	ENSMLEG00000033660	CMSS1	100	81.004	Mandrillus_leucophaeus
ENSMOCG00000021937	Cmss1	100	52.041	ENSMAMG00000017176	cmss1	100	52.381	Mastacembelus_armatus
ENSMOCG00000021937	Cmss1	100	50.512	ENSMZEG00005021886	cmss1	100	51.014	Maylandia_zebra
ENSMOCG00000021937	Cmss1	83	68.421	ENSMGAG00000014360	CMSS1	100	68.421	Meleagris_gallopavo
ENSMOCG00000021937	Cmss1	100	67.986	ENSMAUG00000020609	Cmss1	100	67.986	Mesocricetus_auratus
ENSMOCG00000021937	Cmss1	100	82.079	ENSMICG00000048977	CMSS1	100	82.079	Microcebus_murinus
ENSMOCG00000021937	Cmss1	73	60.396	ENSMMOG00000019794	cmss1	97	55.649	Mola_mola
ENSMOCG00000021937	Cmss1	92	72.093	ENSMODG00000002275	CMSS1	97	72.093	Monodelphis_domestica
ENSMOCG00000021937	Cmss1	100	52.055	ENSMALG00000004250	cmss1	100	52.189	Monopterus_albus
ENSMOCG00000021937	Cmss1	100	86.957	MGP_CAROLIEiJ_G0020824	Cmss1	100	86.957	Mus_caroli
ENSMOCG00000021937	Cmss1	100	88.043	ENSMUSG00000022748	Cmss1	100	88.043	Mus_musculus
ENSMOCG00000021937	Cmss1	100	86.232	MGP_PahariEiJ_G0016524	Cmss1	100	86.232	Mus_pahari
ENSMOCG00000021937	Cmss1	100	88.043	MGP_SPRETEiJ_G0021724	Cmss1	100	88.043	Mus_spretus
ENSMOCG00000021937	Cmss1	88	85.246	ENSMPUG00000011324	CMSS1	99	84.047	Mustela_putorius_furo
ENSMOCG00000021937	Cmss1	93	83.846	ENSMLUG00000001131	CMSS1	99	83.846	Myotis_lucifugus
ENSMOCG00000021937	Cmss1	100	83.154	ENSNGAG00000020316	Cmss1	100	83.154	Nannospalax_galili
ENSMOCG00000021937	Cmss1	100	50.171	ENSNBRG00000003095	cmss1	100	50.338	Neolamprologus_brichardi
ENSMOCG00000021937	Cmss1	100	82.796	ENSNLEG00000034172	CMSS1	100	82.796	Nomascus_leucogenys
ENSMOCG00000021937	Cmss1	83	63.158	ENSMEUG00000014505	CMSS1	100	63.158	Notamacropus_eugenii
ENSMOCG00000021937	Cmss1	100	83.094	ENSOPRG00000002986	CMSS1	100	83.094	Ochotona_princeps
ENSMOCG00000021937	Cmss1	100	76.978	ENSODEG00000003558	-	100	76.978	Octodon_degus
ENSMOCG00000021937	Cmss1	100	69.643	ENSODEG00000001853	-	100	69.643	Octodon_degus
ENSMOCG00000021937	Cmss1	100	66.304	ENSODEG00000009446	-	100	66.304	Octodon_degus
ENSMOCG00000021937	Cmss1	100	79.570	ENSODEG00000005226	-	100	79.570	Octodon_degus
ENSMOCG00000021937	Cmss1	73	60.396	ENSONIG00000006678	cmss1	89	53.112	Oreochromis_niloticus
ENSMOCG00000021937	Cmss1	91	70.751	ENSOANG00000007529	CMSS1	100	73.820	Ornithorhynchus_anatinus
ENSMOCG00000021937	Cmss1	96	80.741	ENSOCUG00000025366	CMSS1	98	80.741	Oryctolagus_cuniculus
ENSMOCG00000021937	Cmss1	100	52.281	ENSORLG00000020340	cmss1	100	53.497	Oryzias_latipes
ENSMOCG00000021937	Cmss1	83	51.965	ENSORLG00020012235	cmss1	99	51.502	Oryzias_latipes_hni
ENSMOCG00000021937	Cmss1	73	55.446	ENSORLG00015015551	cmss1	75	55.446	Oryzias_latipes_hsok
ENSMOCG00000021937	Cmss1	100	50.519	ENSOMEG00000012555	cmss1	100	52.560	Oryzias_melastigma
ENSMOCG00000021937	Cmss1	83	82.895	ENSOGAG00000002045	CMSS1	100	82.895	Otolemur_garnettii
ENSMOCG00000021937	Cmss1	96	77.239	ENSOARG00000017899	CMSS1	92	76.952	Ovis_aries
ENSMOCG00000021937	Cmss1	97	79.554	ENSPPAG00000038515	CMSS1	99	79.554	Pan_paniscus
ENSMOCG00000021937	Cmss1	100	83.871	ENSPPRG00000016767	CMSS1	100	83.871	Panthera_pardus
ENSMOCG00000021937	Cmss1	100	83.513	ENSPTIG00000018274	CMSS1	100	83.513	Panthera_tigris_altaica
ENSMOCG00000021937	Cmss1	100	81.720	ENSPTRG00000015157	CMSS1	100	82.449	Pan_troglodytes
ENSMOCG00000021937	Cmss1	93	79.608	ENSPANG00000019980	CMSS1	99	79.608	Papio_anubis
ENSMOCG00000021937	Cmss1	95	55.636	ENSPKIG00000012609	cmss1	97	56.274	Paramormyrops_kingsleyae
ENSMOCG00000021937	Cmss1	83	71.616	ENSPSIG00000003849	CMSS1	100	71.616	Pelodiscus_sinensis
ENSMOCG00000021937	Cmss1	85	57.692	ENSPMGG00000010286	cmss1	99	57.265	Periophthalmus_magnuspinnatus
ENSMOCG00000021937	Cmss1	100	87.500	ENSPEMG00000016384	Cmss1	100	87.500	Peromyscus_maniculatus_bairdii
ENSMOCG00000021937	Cmss1	73	53.960	ENSPMAG00000001146	cmss1	99	53.960	Petromyzon_marinus
ENSMOCG00000021937	Cmss1	91	71.875	ENSPCIG00000015656	CMSS1	97	71.875	Phascolarctos_cinereus
ENSMOCG00000021937	Cmss1	100	51.525	ENSPFOG00000016849	cmss1	100	51.525	Poecilia_formosa
ENSMOCG00000021937	Cmss1	100	51.186	ENSPLAG00000008323	cmss1	100	51.186	Poecilia_latipinna
ENSMOCG00000021937	Cmss1	100	51.864	ENSPMEG00000021020	cmss1	100	51.864	Poecilia_mexicana
ENSMOCG00000021937	Cmss1	73	61.881	ENSPREG00000007618	cmss1	69	61.881	Poecilia_reticulata
ENSMOCG00000021937	Cmss1	100	81.720	ENSPPYG00000013606	CMSS1	100	81.720	Pongo_abelii
ENSMOCG00000021937	Cmss1	100	82.796	ENSPCOG00000020035	CMSS1	100	82.796	Propithecus_coquereli
ENSMOCG00000021937	Cmss1	100	71.685	ENSPVAG00000017031	CMSS1	100	71.685	Pteropus_vampyrus
ENSMOCG00000021937	Cmss1	91	50.187	ENSPNYG00000013428	cmss1	97	50.741	Pundamilia_nyererei
ENSMOCG00000021937	Cmss1	100	47.020	ENSPNAG00000007912	cmss1	100	48.299	Pygocentrus_nattereri
ENSMOCG00000021937	Cmss1	93	86.328	ENSRNOG00000027888	Cmss1	99	86.328	Rattus_norvegicus
ENSMOCG00000021937	Cmss1	100	79.928	ENSRBIG00000037931	CMSS1	100	79.928	Rhinopithecus_bieti
ENSMOCG00000021937	Cmss1	100	79.928	ENSRROG00000042910	CMSS1	100	79.928	Rhinopithecus_roxellana
ENSMOCG00000021937	Cmss1	93	80.695	ENSSBOG00000030980	CMSS1	99	80.695	Saimiri_boliviensis_boliviensis
ENSMOCG00000021937	Cmss1	89	70.238	ENSSHAG00000009321	CMSS1	99	70.238	Sarcophilus_harrisii
ENSMOCG00000021937	Cmss1	100	53.448	ENSSFOG00015001509	cmss1	100	54.138	Scleropages_formosus
ENSMOCG00000021937	Cmss1	100	51.195	ENSSMAG00000001653	cmss1	100	52.218	Scophthalmus_maximus
ENSMOCG00000021937	Cmss1	100	52.397	ENSSDUG00000007719	cmss1	100	53.472	Seriola_dumerili
ENSMOCG00000021937	Cmss1	75	63.107	ENSSLDG00000012300	cmss1	99	48.954	Seriola_lalandi_dorsalis
ENSMOCG00000021937	Cmss1	100	67.143	ENSSARG00000003584	CMSS1	100	67.143	Sorex_araneus
ENSMOCG00000021937	Cmss1	82	67.699	ENSSPUG00000003865	CMSS1	100	67.699	Sphenodon_punctatus
ENSMOCG00000021937	Cmss1	92	55.472	ENSSPAG00000019182	cmss1	82	55.472	Stegastes_partitus
ENSMOCG00000021937	Cmss1	100	83.871	ENSSSCG00000011970	CMSS1	100	83.871	Sus_scrofa
ENSMOCG00000021937	Cmss1	83	65.939	ENSTGUG00000013635	CMSS1	100	65.939	Taeniopygia_guttata
ENSMOCG00000021937	Cmss1	100	50.690	ENSTRUG00000015265	cmss1	100	50.345	Takifugu_rubripes
ENSMOCG00000021937	Cmss1	73	55.446	ENSTNIG00000002880	cmss1	73	55.446	Tetraodon_nigroviridis
ENSMOCG00000021937	Cmss1	100	55.357	ENSTBEG00000016722	CMSS1	100	55.357	Tupaia_belangeri
ENSMOCG00000021937	Cmss1	100	79.570	ENSTTRG00000001562	CMSS1	100	79.570	Tursiops_truncatus
ENSMOCG00000021937	Cmss1	97	80.220	ENSUAMG00000024209	CMSS1	100	86.099	Ursus_americanus
ENSMOCG00000021937	Cmss1	93	82.239	ENSUMAG00000001983	CMSS1	99	82.422	Ursus_maritimus
ENSMOCG00000021937	Cmss1	100	63.799	ENSVPAG00000000263	CMSS1	100	63.799	Vicugna_pacos
ENSMOCG00000021937	Cmss1	88	83.740	ENSVVUG00000021647	-	100	83.740	Vulpes_vulpes
ENSMOCG00000021937	Cmss1	79	84.793	ENSVVUG00000007776	-	85	84.793	Vulpes_vulpes
ENSMOCG00000021937	Cmss1	100	57.447	ENSXETG00000011858	cmss1	100	57.447	Xenopus_tropicalis
ENSMOCG00000021937	Cmss1	75	62.136	ENSXCOG00000018724	cmss1	69	62.376	Xiphophorus_couchianus
ENSMOCG00000021937	Cmss1	75	62.136	ENSXMAG00000011243	cmss1	76	62.376	Xiphophorus_maculatus